RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 C2orf88Q9BSF0 95 aa10.78□□□□□ -0.68
USP42-203ENST00000426246 LINC00310P59036 64 aa10.77□□□□□ -0.68
USP42-203ENST00000426246 VWC2Q2TAL6 325 aa10.77□□□□□ -0.68
USP42-203ENST00000426246 TPTE2P1Q5T6R2 138 aa10.77□□□□□ -0.68
USP42-203ENST00000426246 ZNF788Q6ZQV5 615 aa10.77□□□□□ -0.68
USP42-203ENST00000426246 MIEN1Q9BRT3 115 aa10.77□□□□□ -0.68
USP42-203ENST00000426246 CELSR1Q9NYQ6 3014 aa10.77□□□□□ -0.68
USP42-203ENST00000426246 H0YJW9 148 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 HYPMO75409 117 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 PRR20EP86478 221 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 PRR20CP86479 221 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 PRR20DP86480 221 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 PRR20BP86481 221 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 PRR20AP86496 221 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 KLRD1Q13241 179 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 WDR73Q6P4I2 378 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 TSKUQ8WUA8 353 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 RAB1CQ92928 201 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 TYMSP04818 313 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 GRNP28799 593 aaKnown RBP10.77□□□□□ -0.69
USP42-203ENST00000426246 PPIFP30405 207 aaKnown RBP10.77□□□□□ -0.69
USP42-203ENST00000426246 TMEM136Q6ZRR5 245 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 KCNS1Q96KK3 526 aa10.77□□□□□ -0.69
USP42-203ENST00000426246 PARD6GQ9BYG4 376 aaPredicted RBP10.77□□□□□ -0.69
USP42-203ENST00000426246 CX3CL1P78423 397 aa10.76□□□□□ -0.69
USP42-203ENST00000426246 C1orf174Q8IYL3 243 aa10.76□□□□□ -0.69
USP42-203ENST00000426246 SLC25A2Q9BXI2 301 aa10.76□□□□□ -0.69
USP42-203ENST00000426246 NACAE9PAV3 2078 aa10.76□□□□□ -0.69
USP42-203ENST00000426246 IGHV3OR16-10A0A075B7F0 116 aa10.76□□□□□ -0.69
USP42-203ENST00000426246 ZNF207O43670 478 aaKnown RBP10.76□□□□□ -0.69
USP42-203ENST00000426246 TM4SF20Q53R12 229 aa10.76□□□□□ -0.69
USP42-203ENST00000426246 PATE2Q6UY27 113 aa10.76□□□□□ -0.69
USP42-203ENST00000426246 SLC25A48Q6ZT89 311 aaKnown RBP10.76□□□□□ -0.69
USP42-203ENST00000426246 STPG4Q8N801 248 aa10.76□□□□□ -0.69
USP42-203ENST00000426246 DDB2Q92466 427 aa10.76□□□□□ -0.69
USP42-203ENST00000426246 RASL11BQ9BPW5 248 aa10.76□□□□□ -0.69
USP42-203ENST00000426246 HLA-DQA1P01909 254 aa10.75□□□□□ -0.69
USP42-203ENST00000426246 THBDP07204 575 aa10.75□□□□□ -0.69
USP42-203ENST00000426246 CD99P14209 185 aa10.75□□□□□ -0.69
USP42-203ENST00000426246 OR8B3Q8NGG8 313 aa10.75□□□□□ -0.69
USP42-203ENST00000426246 HSBP1L1C9JCN9 74 aa10.75□□□□□ -0.69
USP42-203ENST00000426246 HRNRQ86YZ3 2850 aaPredicted RBP10.75□□□□□ -0.69
USP42-203ENST00000426246 IL4P05112 153 aa10.75□□□□□ -0.69
USP42-203ENST00000426246 PRSS3P2Q8NHM4 247 aa10.75□□□□□ -0.69
USP42-203ENST00000426246 Q9H3A6 140 aa10.75□□□□□ -0.69
USP42-203ENST00000426246 CTSZQ9UBR2 303 aa10.75□□□□□ -0.69
USP42-203ENST00000426246 PRSS46E5RG02 174 aa10.74□□□□□ -0.69
USP42-203ENST00000426246 CA7P43166 264 aa10.74□□□□□ -0.69
USP42-203ENST00000426246 PPOXP50336 477 aa10.74□□□□□ -0.69
USP42-203ENST00000426246 C18orf32Q8TCD1 76 aa10.74□□□□□ -0.69
USP42-203ENST00000426246 IGLV3-9A0A075B6K5 115 aa10.74□□□□□ -0.69
USP42-203ENST00000426246 C20orf202A1L168 122 aa10.74□□□□□ -0.69
USP42-203ENST00000426246 HIST1H1EP10412 219 aaKnown RBP10.74□□□□□ -0.69
USP42-203ENST00000426246 PSG1P11464 419 aa10.74□□□□□ -0.69
USP42-203ENST00000426246 COA6Q5JTJ3 125 aaKnown RBP10.74□□□□□ -0.69
USP42-203ENST00000426246 LINC00322Q6ZN03 302 aaPredicted RBP10.74□□□□□ -0.69
USP42-203ENST00000426246 NIT1Q86X76 327 aa10.74□□□□□ -0.69
USP42-203ENST00000426246 PERPQ96FX8 193 aa10.74□□□□□ -0.69
USP42-203ENST00000426246 ZNF257Q9Y2Q1 563 aa10.74□□□□□ -0.69
USP42-203ENST00000426246 LINC00312Q9Y6C7 94 aa10.74□□□□□ -0.69
USP42-203ENST00000426246 YPEL3P61236 119 aaPredicted RBP10.73□□□□□ -0.69
USP42-203ENST00000426246 C18orf15Q96N68 181 aa10.73□□□□□ -0.69
USP42-203ENST00000426246 PRORYQ9H606 182 aa10.73□□□□□ -0.69
USP42-203ENST00000426246 COL5A1-AS1Q5SY13 56 aa10.73□□□□□ -0.69
USP42-203ENST00000426246 LAMTOR2Q9Y2Q5 125 aa10.73□□□□□ -0.69
USP42-203ENST00000426246 LEPROTL1O95214 131 aa10.73□□□□□ -0.69
USP42-203ENST00000426246 VSTM2AQ8TAG5 236 aa10.73□□□□□ -0.69
USP42-203ENST00000426246 OSR1Q8TAX0 266 aaPredicted RBP10.73□□□□□ -0.69
USP42-203ENST00000426246 VKORC1Q9BQB6 163 aa10.73□□□□□ -0.69
USP42-203ENST00000426246 LINC00527Q9UJ94 153 aa10.73□□□□□ -0.69
USP42-203ENST00000426246 EPDR1Q9UM22 224 aa10.73□□□□□ -0.69
USP42-203ENST00000426246 CFAP46Q8IYW2 2715 aa10.73□□□□□ -0.69
USP42-203ENST00000426246 IGHV1-69-2A0A0G2JMI3 117 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 KLRB1Q12918 225 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 GDF5OSQ5U4N7 250 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 TXNDC17Q9BRA2 123 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 ABCA12Q86UK0 2595 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 TCRBV4S1A1TA0A5B7 111 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 IZUMO1RA6ND01 250 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 OR4C46A6NHA9 309 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 C22orf46C9J442 243 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 Q8TAT8 98 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 GNB1LQ9BYB4 327 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 HIGD1AQ9Y241 93 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 PKD1L2Q7Z442 2459 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 PPIAL4CA0A0B4J2A2 164 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.72□□□□□ -0.69
USP42-203ENST00000426246 GNG7O60262 68 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 NUDT3O95989 172 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 PPIAL4GP0DN37 164 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 PDLIM4P50479 330 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 ZNF329Q86UD4 541 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 OR4B1Q8NGF8 309 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 RNASE6Q93091 150 aaKnown RBP10.72□□□□□ -0.69
USP42-203ENST00000426246 OSTCQ9NRP0 149 aa10.72□□□□□ -0.69
USP42-203ENST00000426246 ABCA2Q9BZC7 2435 aa10.71□□□□□ -0.69
USP42-203ENST00000426246 NDUFA4L2Q9NRX3 87 aa10.71□□□□□ -0.69
USP42-203ENST00000426246 UQCR10Q9UDW1 63 aa10.71□□□□□ -0.69
USP42-203ENST00000426246 A0A1W2PRE2 83 aa10.71□□□□□ -0.69
USP42-203ENST00000426246 PCP4P48539 62 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms