RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 OR8I2Q8N0Y5 310 aa12.82□□□□□ -0.36
SLC6A1-202ENST00000425938 OR10P1Q8NGE3 313 aa12.82□□□□□ -0.36
SLC6A1-202ENST00000425938 RARRES2Q99969 163 aa12.82□□□□□ -0.36
SLC6A1-202ENST00000425938 PTTG2Q9NZH5 202 aa12.82□□□□□ -0.36
SLC6A1-202ENST00000425938 SLC45A2Q9UMX9 530 aa12.82□□□□□ -0.36
SLC6A1-202ENST00000425938 C5orf51A6NDU8 294 aa12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 L7N2F9 121 aa12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 MBPP02686 304 aaPredicted RBP12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 METTL15P1P0C7V9 234 aa12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 ATF4P18848 351 aaPredicted RBP12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 PAX9P55771 341 aa12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 VAMP2P63027 116 aa12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 DLK1P80370 383 aa12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 C12orf45Q8N5I9 185 aaPredicted RBP12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 OR11H2Q8NH07 326 aa12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 TMEM147Q9BVK8 224 aa12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 MGAT4CQ9UBM8 478 aa12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 TBC1D24Q9ULP9 559 aa12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 RCL1Q9Y2P8 373 aaKnown RBP12.81□□□□□ -0.36
SLC6A1-202ENST00000425938 CXorf65A6NEN9 183 aa12.8□□□□□ -0.36
SLC6A1-202ENST00000425938 PMS2P5A8MQ11 134 aa12.8□□□□□ -0.36
SLC6A1-202ENST00000425938 IL5P05113 134 aa12.8□□□□□ -0.36
SLC6A1-202ENST00000425938 ORM2P19652 201 aa12.8□□□□□ -0.36
SLC6A1-202ENST00000425938 ID1P41134 155 aa12.8□□□□□ -0.36
SLC6A1-202ENST00000425938 RRAS2P62070 204 aaPredicted RBP12.8□□□□□ -0.36
SLC6A1-202ENST00000425938 SAMD13Q5VXD3 122 aa12.8□□□□□ -0.36
SLC6A1-202ENST00000425938 ENKURQ8TC29 256 aa12.8□□□□□ -0.36
SLC6A1-202ENST00000425938 FNDC10F2Z333 226 aa12.79□□□□□ -0.36
SLC6A1-202ENST00000425938 UPK1BO75841 260 aa12.79□□□□□ -0.36
SLC6A1-202ENST00000425938 GATA2P23769 480 aaPredicted RBP12.79□□□□□ -0.36
SLC6A1-202ENST00000425938 CYP2G1PQ6ZSU1 146 aa12.79□□□□□ -0.36
SLC6A1-202ENST00000425938 OR1B1Q8NGR6 318 aa12.79□□□□□ -0.36
SLC6A1-202ENST00000425938 SLC25A22Q9H936 323 aa12.79□□□□□ -0.36
SLC6A1-202ENST00000425938 PLECQ15149 4684 aaKnown RBP12.79□□□□□ -0.36
SLC6A1-202ENST00000425938 C7orf66A4D0T2 115 aa12.78□□□□□ -0.36
SLC6A1-202ENST00000425938 CCNKO75909 580 aa12.78□□□□□ -0.36
SLC6A1-202ENST00000425938 GALR1P47211 349 aa12.78□□□□□ -0.36
SLC6A1-202ENST00000425938 PSMB3P49720 205 aa12.78□□□□□ -0.36
SLC6A1-202ENST00000425938 NUTF2P61970 127 aaKnown RBP12.78□□□□□ -0.36
SLC6A1-202ENST00000425938 SELENOTP62341 195 aa12.78□□□□□ -0.36
SLC6A1-202ENST00000425938 PMS2P11Q13670 270 aa12.78□□□□□ -0.36
SLC6A1-202ENST00000425938 TMEM182Q6ZP80 229 aaPredicted RBP12.78□□□□□ -0.36
SLC6A1-202ENST00000425938 C2orf50Q96LR7 162 aa12.78□□□□□ -0.36
SLC6A1-202ENST00000425938 LINC00052Q96N35 136 aa12.78□□□□□ -0.36
SLC6A1-202ENST00000425938 NPVFQ9HCQ7 196 aa12.78□□□□□ -0.36
SLC6A1-202ENST00000425938 LSM5Q9Y4Y9 91 aaKnown RBP12.78□□□□□ -0.36
SLC6A1-202ENST00000425938 ZNF98A6NK75 572 aa12.77□□□□□ -0.37
SLC6A1-202ENST00000425938 JTBO76095 146 aa12.77□□□□□ -0.37
SLC6A1-202ENST00000425938 PVALBP20472 110 aaPredicted RBP12.77□□□□□ -0.37
SLC6A1-202ENST00000425938 MEOX2P50222 304 aa12.77□□□□□ -0.37
SLC6A1-202ENST00000425938 BCAP31P51572 246 aa12.77□□□□□ -0.37
SLC6A1-202ENST00000425938 RAP2BP61225 183 aa12.77□□□□□ -0.37
SLC6A1-202ENST00000425938 EWSR1Q01844 656 aaKnown RBP eCLIP12.77□□□□□ -0.37
SLC6A1-202ENST00000425938 GSG1LQ6UXU4 331 aa12.77□□□□□ -0.37
SLC6A1-202ENST00000425938 GPR82Q96P67 336 aa12.77□□□□□ -0.37
SLC6A1-202ENST00000425938 GGACTQ9BVM4 153 aa12.77□□□□□ -0.37
SLC6A1-202ENST00000425938 DNAH1Q9P2D7 4330 aa12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 NUPR2A6NF83 97 aa12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 K7EPK0 472 aa12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 ISLRO14498 428 aa12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 HYPMO75409 117 aa12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 GIG44P09565 113 aaPredicted RBP12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 LINC00869P0C866 280 aa12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 C4BPBP20851 252 aa12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 TEPPQ6URK8 271 aa12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 S100A7AQ86SG5 101 aa12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 SLC25A32Q9H2D1 315 aa12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 C11orf68Q9H3H3 251 aaKnown RBP12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 GPN1Q9HCN4 374 aaPredicted RBP12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 BATF3Q9NR55 127 aa12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 DOK5Q9P104 306 aa12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 HIGD1AQ9Y241 93 aa12.76□□□□□ -0.37
SLC6A1-202ENST00000425938 H3BMM0 161 aa12.75□□□□□ -0.37
SLC6A1-202ENST00000425938 HLA-DRB4P13762 266 aa12.75□□□□□ -0.37
SLC6A1-202ENST00000425938 CAV2P51636 162 aa12.75□□□□□ -0.37
SLC6A1-202ENST00000425938 S100A10P60903 97 aa12.75□□□□□ -0.37
SLC6A1-202ENST00000425938 C16orf92Q96LL3 132 aa12.75□□□□□ -0.37
SLC6A1-202ENST00000425938 RSG1Q9BU20 258 aa12.75□□□□□ -0.37
SLC6A1-202ENST00000425938 C1QTNF4Q9BXJ3 329 aa12.75□□□□□ -0.37
SLC6A1-202ENST00000425938 HLA-DRB4X5D2U9 266 aa12.75□□□□□ -0.37
SLC6A1-202ENST00000425938 SOCS3O14543 225 aa12.74□□□□□ -0.37
SLC6A1-202ENST00000425938 DEDDO75618 318 aa12.74□□□□□ -0.37
SLC6A1-202ENST00000425938 OR5G3P0C626 314 aa12.74□□□□□ -0.37
SLC6A1-202ENST00000425938 PLP1P60201 277 aa12.74□□□□□ -0.37
SLC6A1-202ENST00000425938 SLC38A11Q08AI6 406 aa12.74□□□□□ -0.37
SLC6A1-202ENST00000425938 FOXI2Q6ZQN5 318 aa12.74□□□□□ -0.37
SLC6A1-202ENST00000425938 ZNF546Q86UE3 836 aa12.74□□□□□ -0.37
SLC6A1-202ENST00000425938 SCRT1Q9BWW7 348 aa12.74□□□□□ -0.37
SLC6A1-202ENST00000425938 SLC25A39Q9BZJ4 359 aaPredicted RBP12.74□□□□□ -0.37
SLC6A1-202ENST00000425938 H3BRN7 92 aa12.73□□□□□ -0.37
SLC6A1-202ENST00000425938 GOSR2O14653 212 aa12.73□□□□□ -0.37
SLC6A1-202ENST00000425938 ARL16Q0P5N6 197 aa12.73□□□□□ -0.37
SLC6A1-202ENST00000425938 SPATA31B1PQ5VZV4 182 aa12.73□□□□□ -0.37
SLC6A1-202ENST00000425938 C11orf45Q8TAV5 145 aa12.73□□□□□ -0.37
SLC6A1-202ENST00000425938 SHANK2-AS3Q9BTD1 123 aa12.73□□□□□ -0.37
SLC6A1-202ENST00000425938 MFFQ9GZY8 342 aa12.73□□□□□ -0.37
SLC6A1-202ENST00000425938 SAV1Q9H4B6 383 aaPredicted RBP12.73□□□□□ -0.37
SLC6A1-202ENST00000425938 CLEC5AQ9NY25 188 aa12.73□□□□□ -0.37
SLC6A1-202ENST00000425938 RNF24Q9Y225 148 aa12.73□□□□□ -0.37
SLC6A1-202ENST00000425938 HYDINQ4G0P3 5121 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms