RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SOCS3O14543 225 aa13□□□□□ -0.33
SBDSP1-202ENST00000423945 NUP62P37198 522 aaPredicted RBP13□□□□□ -0.33
SBDSP1-202ENST00000423945 TAS2R30P59541 319 aa13□□□□□ -0.33
SBDSP1-202ENST00000423945 C1orf194Q5T5A4 169 aa13□□□□□ -0.33
SBDSP1-202ENST00000423945 RARRES2Q99969 163 aa13□□□□□ -0.33
SBDSP1-202ENST00000423945 PTTG2Q9NZH5 202 aa13□□□□□ -0.33
SBDSP1-202ENST00000423945 FAM240BA0A1B0GVZ2 78 aa12.99□□□□□ -0.33
SBDSP1-202ENST00000423945 TSC22D2O75157 780 aa12.99□□□□□ -0.33
SBDSP1-202ENST00000423945 CFDP00746 253 aaPredicted RBP12.99□□□□□ -0.33
SBDSP1-202ENST00000423945 ATF4P18848 351 aaPredicted RBP12.99□□□□□ -0.33
SBDSP1-202ENST00000423945 DEFB1P60022 68 aa12.99□□□□□ -0.33
SBDSP1-202ENST00000423945 RRAS2P62070 204 aaPredicted RBP12.99□□□□□ -0.33
SBDSP1-202ENST00000423945 DLK1P80370 383 aa12.99□□□□□ -0.33
SBDSP1-202ENST00000423945 C12orf45Q8N5I9 185 aaPredicted RBP12.99□□□□□ -0.33
SBDSP1-202ENST00000423945 OR11H2Q8NH07 326 aa12.99□□□□□ -0.33
SBDSP1-202ENST00000423945 C11orf1Q9H5F2 150 aa12.99□□□□□ -0.33
SBDSP1-202ENST00000423945 SMCO3A2RU48 225 aa12.98□□□□□ -0.33
SBDSP1-202ENST00000423945 UPK1BO75841 260 aa12.98□□□□□ -0.33
SBDSP1-202ENST00000423945 CYP2G1PQ6ZSU1 146 aa12.98□□□□□ -0.33
SBDSP1-202ENST00000423945 BPIFCQ8NFQ6 507 aa12.98□□□□□ -0.33
SBDSP1-202ENST00000423945 SLC25A32Q9H2D1 315 aa12.98□□□□□ -0.33
SBDSP1-202ENST00000423945 FBXL17Q9UF56 701 aa12.98□□□□□ -0.33
SBDSP1-202ENST00000423945 PFDN2Q9UHV9 154 aa12.98□□□□□ -0.33
SBDSP1-202ENST00000423945 SLC45A2Q9UMX9 530 aa12.98□□□□□ -0.33
SBDSP1-202ENST00000423945 ZNF98A6NK75 572 aa12.97□□□□□ -0.33
SBDSP1-202ENST00000423945 H3BMM0 161 aa12.97□□□□□ -0.33
SBDSP1-202ENST00000423945 K7EPK0 472 aa12.97□□□□□ -0.33
SBDSP1-202ENST00000423945 SPP1P10451 314 aa12.97□□□□□ -0.33
SBDSP1-202ENST00000423945 ORM2P19652 201 aa12.97□□□□□ -0.33
SBDSP1-202ENST00000423945 SNRPD3P62318 126 aaKnown RBP12.97□□□□□ -0.33
SBDSP1-202ENST00000423945 IL15RAQ13261 267 aa12.97□□□□□ -0.33
SBDSP1-202ENST00000423945 PMS2P11Q13670 270 aa12.97□□□□□ -0.33
SBDSP1-202ENST00000423945 GDF5OSQ5U4N7 250 aa12.97□□□□□ -0.33
SBDSP1-202ENST00000423945 MORN3Q6PF18 240 aaPredicted RBP12.97□□□□□ -0.33
SBDSP1-202ENST00000423945 CSNK1G2-AS1Q8NCQ2 148 aa12.97□□□□□ -0.33
SBDSP1-202ENST00000423945 C11orf68Q9H3H3 251 aaKnown RBP12.97□□□□□ -0.33
SBDSP1-202ENST00000423945 FAM25EA8MYX2 175 aa12.96□□□□□ -0.33
SBDSP1-202ENST00000423945 FNDC10F2Z333 226 aa12.96□□□□□ -0.33
SBDSP1-202ENST00000423945 ZNF846Q147U1 533 aa12.96□□□□□ -0.33
SBDSP1-202ENST00000423945 MZT2BQ6NZ67 158 aa12.96□□□□□ -0.33
SBDSP1-202ENST00000423945 OR8I2Q8N0Y5 310 aa12.96□□□□□ -0.33
SBDSP1-202ENST00000423945 OR1B1Q8NGR6 318 aa12.96□□□□□ -0.33
SBDSP1-202ENST00000423945 PPP1R14BQ96C90 147 aa12.96□□□□□ -0.33
SBDSP1-202ENST00000423945 CLEC5AQ9NY25 188 aa12.96□□□□□ -0.33
SBDSP1-202ENST00000423945 H3BRN7 92 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 DEFB4AO15263 64 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 IL5P05113 134 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 HLA-DRB4P13762 266 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 PLP1P60201 277 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 Q8NAQ8 132 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 OR10P1Q8NGE3 313 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 C2orf50Q96LR7 162 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 SCRT1Q9BWW7 348 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 SLC25A22Q9H936 323 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 NPVFQ9HCQ7 196 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 DOK5Q9P104 306 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 LSM5Q9Y4Y9 91 aaKnown RBP12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 HLA-DRB4X5D2U9 266 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 X6R8D5 127 aa12.95□□□□□ -0.34
SBDSP1-202ENST00000423945 C5orf51A6NDU8 294 aa12.94□□□□□ -0.34
SBDSP1-202ENST00000423945 CXorf65A6NEN9 183 aa12.94□□□□□ -0.34
SBDSP1-202ENST00000423945 LINC00869P0C866 280 aa12.94□□□□□ -0.34
SBDSP1-202ENST00000423945 PSMB3P49720 205 aa12.94□□□□□ -0.34
SBDSP1-202ENST00000423945 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.94□□□□□ -0.34
SBDSP1-202ENST00000423945 PATE2Q6UY27 113 aa12.94□□□□□ -0.34
SBDSP1-202ENST00000423945 C20orf173Q96LM9 149 aa12.94□□□□□ -0.34
SBDSP1-202ENST00000423945 LINC00052Q96N35 136 aa12.94□□□□□ -0.34
SBDSP1-202ENST00000423945 SLC25A39Q9BZJ4 359 aaPredicted RBP12.94□□□□□ -0.34
SBDSP1-202ENST00000423945 ZNF705EA8MWA4 302 aaPredicted RBP12.93□□□□□ -0.34
SBDSP1-202ENST00000423945 RBMY1A1P0DJD3 496 aaKnown RBP12.93□□□□□ -0.34
SBDSP1-202ENST00000423945 RBMY1CP0DJD4 496 aa12.93□□□□□ -0.34
SBDSP1-202ENST00000423945 SLC38A11Q08AI6 406 aa12.93□□□□□ -0.34
SBDSP1-202ENST00000423945 RBMY1FQ15415 496 aaKnown RBP12.93□□□□□ -0.34
SBDSP1-202ENST00000423945 TMEM41BQ5BJD5 291 aa12.93□□□□□ -0.34
SBDSP1-202ENST00000423945 TMEM217Q8N7C4 229 aa12.93□□□□□ -0.34
SBDSP1-202ENST00000423945 TMEM147Q9BVK8 224 aa12.93□□□□□ -0.34
SBDSP1-202ENST00000423945 SAV1Q9H4B6 383 aaPredicted RBP12.93□□□□□ -0.34
SBDSP1-202ENST00000423945 MGAT4CQ9UBM8 478 aa12.93□□□□□ -0.34
SBDSP1-202ENST00000423945 FAM24AA6NFZ4 105 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 F6UB75 175 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 L7N2F9 121 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 ISLRO14498 428 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 DEDDO75618 318 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 ID1P41134 155 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 GALR1P47211 349 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 SELENOTP62341 195 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 VAMP2P63027 116 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 RAB32Q13637 225 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 CEMP1Q6PRD7 247 aaPredicted RBP12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 TEPPQ6URK8 271 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 FOXI2Q6ZQN5 318 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 NRARPQ7Z6K4 114 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 UHRF2Q96PU4 802 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 SHANK2-AS3Q9BTD1 123 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 RSG1Q9BU20 258 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 GGACTQ9BVM4 153 aa12.92□□□□□ -0.34
SBDSP1-202ENST00000423945 IGHV4-28A0A0C4DH34 117 aa12.91□□□□□ -0.34
SBDSP1-202ENST00000423945 NANOS2P60321 138 aaKnown RBP12.91□□□□□ -0.34
SBDSP1-202ENST00000423945 ENKURQ8TC29 256 aa12.91□□□□□ -0.34
SBDSP1-202ENST00000423945 MGST2Q99735 147 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms