RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 CEMP1Q6PRD7 247 aaPredicted RBP11.23□□□□□ -0.61
SPC24-201ENST00000423327 SMIM8Q96KF7 97 aa11.23□□□□□ -0.61
SPC24-201ENST00000423327 SEC22CQ9BRL7 303 aa11.23□□□□□ -0.61
SPC24-201ENST00000423327 TBC1D24Q9ULP9 559 aa11.23□□□□□ -0.61
SPC24-201ENST00000423327 BIRC6Q9NR09 4857 aa11.22□□□□□ -0.61
SPC24-201ENST00000423327 TRAV6A0A075B6T7 132 aa11.22□□□□□ -0.61
SPC24-201ENST00000423327 NUPR2A6NF83 97 aa11.22□□□□□ -0.61
SPC24-201ENST00000423327 ZNF705EA8MWA4 302 aaPredicted RBP11.22□□□□□ -0.61
SPC24-201ENST00000423327 SCGB1D2O95969 90 aa11.22□□□□□ -0.61
SPC24-201ENST00000423327 FABP1P07148 127 aa11.22□□□□□ -0.61
SPC24-201ENST00000423327 HLA-DRB4P13762 266 aa11.22□□□□□ -0.61
SPC24-201ENST00000423327 NANOS2P60321 138 aaKnown RBP11.22□□□□□ -0.61
SPC24-201ENST00000423327 SNRPD3P62318 126 aaKnown RBP11.22□□□□□ -0.61
SPC24-201ENST00000423327 AKR1C1Q04828 323 aa11.22□□□□□ -0.61
SPC24-201ENST00000423327 TMEM144Q7Z5S9 345 aa11.22□□□□□ -0.61
SPC24-201ENST00000423327 LINC00476Q8WZB0 136 aa11.22□□□□□ -0.61
SPC24-201ENST00000423327 CCDC32Q9BV29 185 aa11.22□□□□□ -0.61
SPC24-201ENST00000423327 SLC25A32Q9H2D1 315 aa11.22□□□□□ -0.61
SPC24-201ENST00000423327 NUDT15Q9NV35 164 aa11.22□□□□□ -0.61
SPC24-201ENST00000423327 HLA-DRB4X5D2U9 266 aa11.22□□□□□ -0.61
SPC24-201ENST00000423327 IGHV4-28A0A0C4DH34 117 aa11.21□□□□□ -0.61
SPC24-201ENST00000423327 MBPP02686 304 aaPredicted RBP11.21□□□□□ -0.61
SPC24-201ENST00000423327 METTL15P1P0C7V9 234 aa11.21□□□□□ -0.61
SPC24-201ENST00000423327 RBMY1A1P0DJD3 496 aaKnown RBP11.21□□□□□ -0.61
SPC24-201ENST00000423327 RBMY1CP0DJD4 496 aa11.21□□□□□ -0.61
SPC24-201ENST00000423327 ARL16Q0P5N6 197 aa11.21□□□□□ -0.61
SPC24-201ENST00000423327 RBMY1FQ15415 496 aaKnown RBP11.21□□□□□ -0.61
SPC24-201ENST00000423327 CNPY1Q3B7I2 92 aa11.21□□□□□ -0.61
SPC24-201ENST00000423327 TMEM217Q8N7C4 229 aa11.21□□□□□ -0.61
SPC24-201ENST00000423327 PHLDA1Q8WV24 401 aaPredicted RBP11.21□□□□□ -0.61
SPC24-201ENST00000423327 SMCO3A2RU48 225 aa11.2□□□□□ -0.62
SPC24-201ENST00000423327 ZNF98A6NK75 572 aa11.2□□□□□ -0.62
SPC24-201ENST00000423327 RRAS2P62070 204 aaPredicted RBP11.2□□□□□ -0.62
SPC24-201ENST00000423327 DLK1P80370 383 aa11.2□□□□□ -0.62
SPC24-201ENST00000423327 TMEM41BQ5BJD5 291 aa11.2□□□□□ -0.62
SPC24-201ENST00000423327 CYP2G1PQ6ZSU1 146 aa11.2□□□□□ -0.62
SPC24-201ENST00000423327 OR8I2Q8N0Y5 310 aa11.2□□□□□ -0.62
SPC24-201ENST00000423327 BPIFCQ8NFQ6 507 aa11.2□□□□□ -0.62
SPC24-201ENST00000423327 PPP1R14BQ96C90 147 aa11.2□□□□□ -0.62
SPC24-201ENST00000423327 C20orf173Q96LM9 149 aa11.2□□□□□ -0.62
SPC24-201ENST00000423327 C11orf1Q9H5F2 150 aa11.2□□□□□ -0.62
SPC24-201ENST00000423327 GSKIPQ9P0R6 139 aa11.2□□□□□ -0.62
SPC24-201ENST00000423327 FBXL17Q9UF56 701 aa11.2□□□□□ -0.62
SPC24-201ENST00000423327 SLC45A2Q9UMX9 530 aa11.2□□□□□ -0.62
SPC24-201ENST00000423327 VPS13DQ5THJ4 4388 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 C7orf66A4D0T2 115 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 A6NHS1 94 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 H3BRN7 92 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 TSC22D2O75157 780 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 CFDP00746 253 aaPredicted RBP11.19□□□□□ -0.62
SPC24-201ENST00000423327 ORM2P19652 201 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 PSMB3P49720 205 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 TAS2R30P59541 319 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 LINC00299Q6ZSB3 139 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 C11orf45Q8TAV5 145 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 ZNF431Q8TF32 576 aaPredicted RBP11.19□□□□□ -0.62
SPC24-201ENST00000423327 SCRT1Q9BWW7 348 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 SAV1Q9H4B6 383 aaPredicted RBP11.19□□□□□ -0.62
SPC24-201ENST00000423327 SLC25A22Q9H936 323 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 DOK5Q9P104 306 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 PFDN2Q9UHV9 154 aa11.19□□□□□ -0.62
SPC24-201ENST00000423327 ELOA3CA0A087WX78 387 aaPredicted RBP11.18□□□□□ -0.62
SPC24-201ENST00000423327 F6UB75 175 aa11.18□□□□□ -0.62
SPC24-201ENST00000423327 ZNF709Q8N972 641 aa11.18□□□□□ -0.62
SPC24-201ENST00000423327 OR1B1Q8NGR6 318 aa11.18□□□□□ -0.62
SPC24-201ENST00000423327 LINC00052Q96N35 136 aa11.18□□□□□ -0.62
SPC24-201ENST00000423327 XCL2Q9UBD3 114 aa11.18□□□□□ -0.62
SPC24-201ENST00000423327 K7EPK0 472 aa11.17□□□□□ -0.62
SPC24-201ENST00000423327 ISLRO14498 428 aa11.17□□□□□ -0.62
SPC24-201ENST00000423327 MIFP14174 115 aa11.17□□□□□ -0.62
SPC24-201ENST00000423327 PLP1P60201 277 aa11.17□□□□□ -0.62
SPC24-201ENST00000423327 IFITM3Q01628 133 aa11.17□□□□□ -0.62
SPC24-201ENST00000423327 SLC38A11Q08AI6 406 aa11.17□□□□□ -0.62
SPC24-201ENST00000423327 ASAH1Q13510 395 aa11.17□□□□□ -0.62
SPC24-201ENST00000423327 FOXI2Q6ZQN5 318 aa11.17□□□□□ -0.62
SPC24-201ENST00000423327 UHRF2Q96PU4 802 aa11.17□□□□□ -0.62
SPC24-201ENST00000423327 TMEM147Q9BVK8 224 aa11.17□□□□□ -0.62
SPC24-201ENST00000423327 SLC25A39Q9BZJ4 359 aaPredicted RBP11.17□□□□□ -0.62
SPC24-201ENST00000423327 CELA1Q9UNI1 258 aa11.17□□□□□ -0.62
SPC24-201ENST00000423327 DNAH6Q9C0G6 4158 aa11.17□□□□□ -0.62
SPC24-201ENST00000423327 TRAV8-2A0A0B4J237 113 aa11.16□□□□□ -0.62
SPC24-201ENST00000423327 FNDC10F2Z333 226 aa11.16□□□□□ -0.62
SPC24-201ENST00000423327 IGKV3-20P01619 116 aa11.16□□□□□ -0.62
SPC24-201ENST00000423327 IL5P05113 134 aa11.16□□□□□ -0.62
SPC24-201ENST00000423327 H2AFB2P0C5Z0 115 aa11.16□□□□□ -0.62
SPC24-201ENST00000423327 LINC00869P0C866 280 aa11.16□□□□□ -0.62
SPC24-201ENST00000423327 FXYD7P58549 80 aa11.16□□□□□ -0.62
SPC24-201ENST00000423327 IL15RAQ13261 267 aa11.16□□□□□ -0.62
SPC24-201ENST00000423327 PATE2Q6UY27 113 aa11.16□□□□□ -0.62
SPC24-201ENST00000423327 C12orf45Q8N5I9 185 aaPredicted RBP11.16□□□□□ -0.62
SPC24-201ENST00000423327 OR10P1Q8NGE3 313 aa11.16□□□□□ -0.62
SPC24-201ENST00000423327 SHANK2-AS3Q9BTD1 123 aa11.16□□□□□ -0.62
SPC24-201ENST00000423327 RSG1Q9BU20 258 aa11.16□□□□□ -0.62
SPC24-201ENST00000423327 LSM5Q9Y4Y9 91 aaKnown RBP11.16□□□□□ -0.62
SPC24-201ENST00000423327 A0A0J9YX75 114 aa11.15□□□□□ -0.62
SPC24-201ENST00000423327 FAM25EA8MYX2 175 aa11.15□□□□□ -0.62
SPC24-201ENST00000423327 ID1P41134 155 aa11.15□□□□□ -0.62
SPC24-201ENST00000423327 GALR1P47211 349 aa11.15□□□□□ -0.62
SPC24-201ENST00000423327 IGFL4Q6B9Z1 124 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms