RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 DEFB125Q8N687 156 aa8.82□□□□□ -1
LIMS1-207ENST00000422797 ARL6IP6Q8N6S5 226 aa8.82□□□□□ -1
LIMS1-207ENST00000422797 PRSS33Q8NF86 280 aa8.82□□□□□ -1
LIMS1-207ENST00000422797 GTSF1Q8WW33 167 aa8.82□□□□□ -1
LIMS1-207ENST00000422797 SCNM1Q9BWG6 230 aa8.82□□□□□ -1
LIMS1-207ENST00000422797 SCRT2Q9NQ03 307 aa8.82□□□□□ -1
LIMS1-207ENST00000422797 CLEC5AQ9NY25 188 aa8.82□□□□□ -1
LIMS1-207ENST00000422797 VWC2LB2RUY7 222 aa8.81□□□□□ -1
LIMS1-207ENST00000422797 E7EUB6 86 aa8.81□□□□□ -1
LIMS1-207ENST00000422797 TNFRSF13BO14836 293 aaPredicted RBP8.81□□□□□ -1
LIMS1-207ENST00000422797 CD5LO43866 347 aa8.81□□□□□ -1
LIMS1-207ENST00000422797 RBP4P02753 201 aa8.81□□□□□ -1
LIMS1-207ENST00000422797 CRYGBP07316 175 aa8.81□□□□□ -1
LIMS1-207ENST00000422797 CCL3L1P16619 93 aa8.81□□□□□ -1
LIMS1-207ENST00000422797 DLX6P56179 175 aa8.81□□□□□ -1
LIMS1-207ENST00000422797 SEC11AP67812 179 aa8.81□□□□□ -1
LIMS1-207ENST00000422797 VAMP3Q15836 100 aa8.81□□□□□ -1
LIMS1-207ENST00000422797 MAJINQ3KP22 176 aa8.81□□□□□ -1
LIMS1-207ENST00000422797 C10orf55Q5SWW7 151 aa8.81□□□□□ -1
LIMS1-207ENST00000422797 ZNF835Q9Y2P0 537 aa8.81□□□□□ -1
LIMS1-207ENST00000422797 FAM186AA6NE01 2351 aa8.81□□□□□ -1
LIMS1-207ENST00000422797 APOHP02749 345 aaPredicted RBP8.8□□□□□ -1
LIMS1-207ENST00000422797 IGHV1-8P0DP01 117 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 COL8A2P25067 703 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 RBX1P62877 108 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 ADIPOQQ15848 244 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 DEFB109BQ30KR1 87 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 BVES-AS1Q5T3Y7 98 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 Q6ZS92 163 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 BPIFA4PQ86YQ2 179 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 CIARTQ8N365 385 aaPredicted RBP8.8□□□□□ -1
LIMS1-207ENST00000422797 OR1N2Q8NGR9 330 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 OR10AG1Q8NH19 301 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 FAM57AQ8TBR7 257 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 TMEM133Q9H2Q1 129 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 AP5S1Q9NUS5 200 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 MRPL36Q9P0J6 103 aaKnown RBP8.8□□□□□ -1
LIMS1-207ENST00000422797 ZNRD1Q9P1U0 126 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 RPH3ALQ9UNE2 315 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 SPTBN4Q9H254 2564 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 RAI1Q7Z5J4 1906 aaPredicted RBP8.8□□□□□ -1
LIMS1-207ENST00000422797 C16orf97H3BN30 126 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 LCE2BO14633 110 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 PLAUP00749 431 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 PPBPP02775 128 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 LOXP28300 417 aaPredicted RBP8.8□□□□□ -1
LIMS1-207ENST00000422797 CCL8P80075 99 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 FA2HQ7L5A8 372 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 PEF1Q9UBV8 284 aaKnown RBP8.8□□□□□ -1
LIMS1-207ENST00000422797 SIGLEC9Q9Y336 463 aa8.8□□□□□ -1
LIMS1-207ENST00000422797 CFAP54Q96N23 3096 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 TECTAO75443 2155 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 DSCAMO60469 2012 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 CACNA1HO95180 2353 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 USP34Q70CQ2 3546 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 K7EM74 188 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 TAX1BP3O14907 124 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 NUDT3O95989 172 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 IGLC1P0CG04 106 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 COX8AP10176 69 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 S100A7P31151 101 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 PDE6HQ13956 83 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 COTL1Q14019 142 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 PLGLAQ15195 96 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 MRGPRG-AS1Q2M3A8 158 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 ANKRD39Q53RE8 183 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 MPV17L2Q567V2 206 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 LINC00322Q6ZN03 302 aaPredicted RBP8.79□□□□□ -1
LIMS1-207ENST00000422797 ZNF493Q6ZR52 646 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 RPRMLQ8N4K4 120 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 KIR3DL3Q8N743 410 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 RASL11BQ9BPW5 248 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 SHANK2-AS3Q9BTD1 123 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 SLC25A39Q9BZJ4 359 aaPredicted RBP8.79□□□□□ -1
LIMS1-207ENST00000422797 RAB1BQ9H0U4 201 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 NGBQ9NPG2 151 aa8.79□□□□□ -1
LIMS1-207ENST00000422797 TRBV19A0A075B6N1 114 aa8.78□□□□□ -1
LIMS1-207ENST00000422797 LOC105371242A0A075B767 164 aa8.78□□□□□ -1
LIMS1-207ENST00000422797 SH2D7A6NKC9 451 aaPredicted RBP8.78□□□□□ -1
LIMS1-207ENST00000422797 ENSAO43768 121 aaKnown RBP8.78□□□□□ -1
LIMS1-207ENST00000422797 FAM87AP0C7U9 286 aa8.78□□□□□ -1
LIMS1-207ENST00000422797 FTH1P19P0C7X4 201 aa8.78□□□□□ -1
LIMS1-207ENST00000422797 CT45A10P0DMU9 189 aa8.78□□□□□ -1
LIMS1-207ENST00000422797 LYZP61626 148 aa8.78□□□□□ -1
LIMS1-207ENST00000422797 TCF15Q12870 199 aa8.78□□□□□ -1
LIMS1-207ENST00000422797 HCP5Q6MZN7 132 aa8.78□□□□□ -1
LIMS1-207ENST00000422797 NPFFR1Q9GZQ6 430 aa8.78□□□□□ -1
LIMS1-207ENST00000422797 TEX22C9J3V5 150 aa8.77□□□□□ -1.01
LIMS1-207ENST00000422797 H3BRN7 92 aa8.77□□□□□ -1.01
LIMS1-207ENST00000422797 SCGB2A1O75556 95 aa8.77□□□□□ -1.01
LIMS1-207ENST00000422797 IGLV2-11P01706 119 aa8.77□□□□□ -1.01
LIMS1-207ENST00000422797 THBDP07204 575 aa8.77□□□□□ -1.01
LIMS1-207ENST00000422797 GPR183P32249 361 aa8.77□□□□□ -1.01
LIMS1-207ENST00000422797 LINC01559Q495D7 138 aa8.77□□□□□ -1.01
LIMS1-207ENST00000422797 GOLT1AQ6ZVE7 132 aa8.77□□□□□ -1.01
LIMS1-207ENST00000422797 SMIM15Q7Z3B0 74 aa8.77□□□□□ -1.01
LIMS1-207ENST00000422797 PRNTQ86SH4 94 aa8.77□□□□□ -1.01
LIMS1-207ENST00000422797 PPP1R27Q86WC6 154 aa8.77□□□□□ -1.01
LIMS1-207ENST00000422797 RNASE8Q8TDE3 154 aaKnown RBP8.77□□□□□ -1.01
LIMS1-207ENST00000422797 NEU4Q8WWR8 484 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms