RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 TAS2R30P59541 319 aa16.06■□□□□ 0.16
TRAF4-204ENST00000422344 MORN3Q6PF18 240 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-204ENST00000422344 TMEM144Q7Z5S9 345 aa16.06■□□□□ 0.16
TRAF4-204ENST00000422344 TRPT1Q86TN4 253 aaKnown RBP16.06■□□□□ 0.16
TRAF4-204ENST00000422344 OR8I2Q8N0Y5 310 aa16.06■□□□□ 0.16
TRAF4-204ENST00000422344 C12orf45Q8N5I9 185 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-204ENST00000422344 SEPSECSQ9HD40 501 aaKnown RBP16.06■□□□□ 0.16
TRAF4-204ENST00000422344 C5orf51A6NDU8 294 aa16.05■□□□□ 0.16
TRAF4-204ENST00000422344 L7N2F9 121 aa16.05■□□□□ 0.16
TRAF4-204ENST00000422344 SPP1P10451 314 aa16.05■□□□□ 0.16
TRAF4-204ENST00000422344 PAX9P55771 341 aa16.05■□□□□ 0.16
TRAF4-204ENST00000422344 RRAS2P62070 204 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-204ENST00000422344 VAMP2P63027 116 aa16.05■□□□□ 0.16
TRAF4-204ENST00000422344 ASAH1Q13510 395 aa16.05■□□□□ 0.16
TRAF4-204ENST00000422344 OR10P1Q8NGE3 313 aa16.05■□□□□ 0.16
TRAF4-204ENST00000422344 MGAT4CQ9UBM8 478 aa16.05■□□□□ 0.16
TRAF4-204ENST00000422344 TBC1D24Q9ULP9 559 aa16.05■□□□□ 0.16
TRAF4-204ENST00000422344 SLC45A2Q9UMX9 530 aa16.05■□□□□ 0.16
TRAF4-204ENST00000422344 RCL1Q9Y2P8 373 aaKnown RBP16.05■□□□□ 0.16
TRAF4-204ENST00000422344 CXorf65A6NEN9 183 aa16.04■□□□□ 0.16
TRAF4-204ENST00000422344 MBPP02686 304 aaPredicted RBP16.04■□□□□ 0.16
TRAF4-204ENST00000422344 ORM2P19652 201 aa16.04■□□□□ 0.16
TRAF4-204ENST00000422344 ID1P41134 155 aa16.04■□□□□ 0.16
TRAF4-204ENST00000422344 DLK1P80370 383 aa16.04■□□□□ 0.16
TRAF4-204ENST00000422344 TMEM41BQ5BJD5 291 aa16.04■□□□□ 0.16
TRAF4-204ENST00000422344 TMEM14EPQ6UXP3 125 aa16.04■□□□□ 0.16
TRAF4-204ENST00000422344 OR11H2Q8NH07 326 aa16.04■□□□□ 0.16
TRAF4-204ENST00000422344 ENKURQ8TC29 256 aa16.04■□□□□ 0.16
TRAF4-204ENST00000422344 TMEM147Q9BVK8 224 aa16.04■□□□□ 0.16
TRAF4-204ENST00000422344 IL5P05113 134 aa16.03■□□□□ 0.16
TRAF4-204ENST00000422344 GATA2P23769 480 aaPredicted RBP16.03■□□□□ 0.16
TRAF4-204ENST00000422344 PMS2P11Q13670 270 aa16.03■□□□□ 0.16
TRAF4-204ENST00000422344 CYP2G1PQ6ZSU1 146 aa16.03■□□□□ 0.16
TRAF4-204ENST00000422344 OR1B1Q8NGR6 318 aa16.03■□□□□ 0.16
TRAF4-204ENST00000422344 SLC25A22Q9H936 323 aa16.03■□□□□ 0.16
TRAF4-204ENST00000422344 LSM5Q9Y4Y9 91 aaKnown RBP16.03■□□□□ 0.16
TRAF4-204ENST00000422344 PMS2P5A8MQ11 134 aa16.02■□□□□ 0.16
TRAF4-204ENST00000422344 UPK1BO75841 260 aa16.02■□□□□ 0.16
TRAF4-204ENST00000422344 CCNKO75909 580 aa16.02■□□□□ 0.16
TRAF4-204ENST00000422344 GALR1P47211 349 aa16.02■□□□□ 0.16
TRAF4-204ENST00000422344 C7orf66A4D0T2 115 aa16.01■□□□□ 0.15
TRAF4-204ENST00000422344 FNDC10F2Z333 226 aa16.01■□□□□ 0.15
TRAF4-204ENST00000422344 ATF4P18848 351 aaPredicted RBP16.01■□□□□ 0.15
TRAF4-204ENST00000422344 BCAP31P51572 246 aa16.01■□□□□ 0.15
TRAF4-204ENST00000422344 SAMD13Q5VXD3 122 aa16.01■□□□□ 0.15
TRAF4-204ENST00000422344 LINC00052Q96N35 136 aa16.01■□□□□ 0.15
TRAF4-204ENST00000422344 NPVFQ9HCQ7 196 aa16.01■□□□□ 0.15
TRAF4-204ENST00000422344 PSMB3P49720 205 aa16■□□□□ 0.15
TRAF4-204ENST00000422344 RAP2BP61225 183 aa16■□□□□ 0.15
TRAF4-204ENST00000422344 NUTF2P61970 127 aaKnown RBP16■□□□□ 0.15
TRAF4-204ENST00000422344 SELENOTP62341 195 aa16■□□□□ 0.15
TRAF4-204ENST00000422344 EWSR1Q01844 656 aaKnown RBP eCLIP16■□□□□ 0.152e-6■■■■□ 23.3
TRAF4-204ENST00000422344 GSG1LQ6UXU4 331 aa16■□□□□ 0.15
TRAF4-204ENST00000422344 TMEM182Q6ZP80 229 aaPredicted RBP16■□□□□ 0.15
TRAF4-204ENST00000422344 C2orf50Q96LR7 162 aa16■□□□□ 0.15
TRAF4-204ENST00000422344 GPN1Q9HCN4 374 aaPredicted RBP16■□□□□ 0.15
TRAF4-204ENST00000422344 DOK5Q9P104 306 aa16■□□□□ 0.15
TRAF4-204ENST00000422344 ZNF98A6NK75 572 aa15.99■□□□□ 0.15
TRAF4-204ENST00000422344 K7EPK0 472 aa15.99■□□□□ 0.15
TRAF4-204ENST00000422344 PVALBP20472 110 aaPredicted RBP15.99■□□□□ 0.15
TRAF4-204ENST00000422344 MEOX2P50222 304 aa15.99■□□□□ 0.15
TRAF4-204ENST00000422344 TEPPQ6URK8 271 aa15.99■□□□□ 0.15
TRAF4-204ENST00000422344 S100A7AQ86SG5 101 aa15.99■□□□□ 0.15
TRAF4-204ENST00000422344 GPR82Q96P67 336 aa15.99■□□□□ 0.15
TRAF4-204ENST00000422344 SLC25A32Q9H2D1 315 aa15.99■□□□□ 0.15
TRAF4-204ENST00000422344 NUPR2A6NF83 97 aa15.98■□□□□ 0.15
TRAF4-204ENST00000422344 HYPMO75409 117 aa15.98■□□□□ 0.15
TRAF4-204ENST00000422344 LINC00869P0C866 280 aa15.98■□□□□ 0.15
TRAF4-204ENST00000422344 C4BPBP20851 252 aa15.98■□□□□ 0.15
TRAF4-204ENST00000422344 CAV2P51636 162 aa15.98■□□□□ 0.15
TRAF4-204ENST00000422344 S100A10P60903 97 aa15.98■□□□□ 0.15
TRAF4-204ENST00000422344 GGACTQ9BVM4 153 aa15.98■□□□□ 0.15
TRAF4-204ENST00000422344 C11orf68Q9H3H3 251 aaKnown RBP15.98■□□□□ 0.15
TRAF4-204ENST00000422344 BATF3Q9NR55 127 aa15.98■□□□□ 0.15
TRAF4-204ENST00000422344 HIGD1AQ9Y241 93 aa15.98■□□□□ 0.15
TRAF4-204ENST00000422344 H3BMM0 161 aa15.97■□□□□ 0.15
TRAF4-204ENST00000422344 ISLRO14498 428 aa15.97■□□□□ 0.15
TRAF4-204ENST00000422344 OR5G3P0C626 314 aa15.97■□□□□ 0.15
TRAF4-204ENST00000422344 HLA-DRB4P13762 266 aa15.97■□□□□ 0.15
TRAF4-204ENST00000422344 C16orf92Q96LL3 132 aa15.97■□□□□ 0.15
TRAF4-204ENST00000422344 RSG1Q9BU20 258 aa15.97■□□□□ 0.15
TRAF4-204ENST00000422344 C1QTNF4Q9BXJ3 329 aa15.97■□□□□ 0.15
TRAF4-204ENST00000422344 HLA-DRB4X5D2U9 266 aa15.97■□□□□ 0.15
TRAF4-204ENST00000422344 SOCS3O14543 225 aa15.96■□□□□ 0.15
TRAF4-204ENST00000422344 DEDDO75618 318 aa15.96■□□□□ 0.15
TRAF4-204ENST00000422344 GIG44P09565 113 aaPredicted RBP15.96■□□□□ 0.15
TRAF4-204ENST00000422344 SLC38A11Q08AI6 406 aa15.96■□□□□ 0.15
TRAF4-204ENST00000422344 SCRT1Q9BWW7 348 aa15.96■□□□□ 0.15
TRAF4-204ENST00000422344 SLC25A39Q9BZJ4 359 aaPredicted RBP15.96■□□□□ 0.15
TRAF4-204ENST00000422344 CLEC5AQ9NY25 188 aa15.96■□□□□ 0.15
TRAF4-204ENST00000422344 AGRNO00468 2067 aa15.95■□□□□ 0.14
TRAF4-204ENST00000422344 GOSR2O14653 212 aa15.95■□□□□ 0.14
TRAF4-204ENST00000422344 ARL16Q0P5N6 197 aa15.95■□□□□ 0.14
TRAF4-204ENST00000422344 FOXI2Q6ZQN5 318 aa15.95■□□□□ 0.14
TRAF4-204ENST00000422344 ZNF546Q86UE3 836 aa15.95■□□□□ 0.14
TRAF4-204ENST00000422344 SHANK2-AS3Q9BTD1 123 aa15.95■□□□□ 0.14
TRAF4-204ENST00000422344 H3BRN7 92 aa15.94■□□□□ 0.14
TRAF4-204ENST00000422344 DEFB4AO15263 64 aa15.94■□□□□ 0.14
TRAF4-204ENST00000422344 DEFA1P59665 94 aa15.94■□□□□ 0.14
TRAF4-204ENST00000422344 DEFA3P59666 94 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms