RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ANAPC16Q96DE5 110 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 HSPB9Q9BQS6 159 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 NF1P21359 2839 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 HYPMO75409 117 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 HOXA5P20719 270 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 PERPQ96FX8 193 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 TRAV8-1A0A0A6YYK1 113 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 PGPA6NDG6 321 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 OVOL3O00110 214 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 OR2J3O76001 311 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 FABP4P15090 132 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 CBLN1P23435 193 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 BPIFB3P59826 476 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 EXOC3-AS1Q8N2X6 119 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 OR1L4Q8NGR5 311 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 C22orf15Q8WYQ4 148 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 C11orf52Q96A22 123 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 FANCD2OSQ96PS1 177 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 RASL11BQ9BPW5 248 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 PYGO2Q9BRQ0 406 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 SRD5A3Q9H8P0 318 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 SERTAD4Q9NUC0 356 aa6.94□□□□□ -1.3
SNCA-206ENST00000420646 IGLV2-8P01709 118 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 COL8A1P27658 744 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 SELENOTP62341 195 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 ETFRF1Q6IPR1 90 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 ZNF329Q86UD4 541 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 MAPK1IP1LQ8NDC0 245 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 OR10D4PQ8NGN7 298 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 C14orf144Q96I85 54 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 G3V318 75 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 GGCTO75223 188 aaKnown RBP6.93□□□□□ -1.3
SNCA-206ENST00000420646 NDUFA3O95167 84 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 NBEAP1P0C6P0 100 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 PVRIGQ6DKI7 326 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 OR8I2Q8N0Y5 310 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 NPBQ8NG41 125 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 ARPC1AQ92747 370 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 TRGV9Q99603 122 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 CCL19Q99731 98 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 C19orf24Q9BVV8 132 aa6.93□□□□□ -1.3
SNCA-206ENST00000420646 MRPL32Q9BYC8 188 aaKnown RBP6.93□□□□□ -1.3
SNCA-206ENST00000420646 IGHV4-30-2A0A087WSY4 118 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 A0A1W2PRE2 83 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 GRIFINA4D1Z8 144 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 OR2T8A6NH00 312 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 NDUFB8O95169 186 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 EGR2P11161 476 aaPredicted RBP6.92□□□□□ -1.3
SNCA-206ENST00000420646 CDX1P47902 265 aaPredicted RBP6.92□□□□□ -1.3
SNCA-206ENST00000420646 ECSCRQ19T08 205 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 TXNDC17Q9BRA2 123 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 TMUB1Q9BVT8 246 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 ELOA3CA0A087WX78 387 aaPredicted RBP6.92□□□□□ -1.3
SNCA-206ENST00000420646 IGHV7-81A0A0B4J1V7 117 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 CENPVL3A0A0U1RRI6 287 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 PPP1R2P9O14990 202 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 IL4P05112 153 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 SLC25A5P05141 298 aaKnown RBP6.92□□□□□ -1.3
SNCA-206ENST00000420646 ATP5J2P56134 94 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 KCNIP4Q6PIL6 250 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 ZNF562Q6V9R5 426 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 HIST3H2BBQ8N257 126 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 SLC25A39Q9BZJ4 359 aaPredicted RBP6.92□□□□□ -1.3
SNCA-206ENST00000420646 V9GYV3 84 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 SONP18583 2426 aaKnown RBP6.92□□□□□ -1.3
SNCA-206ENST00000420646 XKRY2A2RUG3 117 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 CORTO00230 105 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 PYY3Q5JQD4 70 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 MRPL41Q8IXM3 137 aaKnown RBP6.92□□□□□ -1.3
SNCA-206ENST00000420646 Q8N9W7 124 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 IGF2BP2-AS1Q96M15 143 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 MS4A10Q96PG2 267 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 RNF5Q99942 180 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 ZNF586Q9NXT0 402 aa6.92□□□□□ -1.3
SNCA-206ENST00000420646 NIPBLQ6KC79 2804 aaeCLIP6.91□□□□□ -1.3
SNCA-206ENST00000420646 F8W735 103 aaPredicted RBP6.91□□□□□ -1.3
SNCA-206ENST00000420646 PEX7O00628 323 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 GP9P14770 177 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 FCGR2BP31994 310 aaPredicted RBP6.91□□□□□ -1.3
SNCA-206ENST00000420646 SRP14P37108 136 aaKnown RBP6.91□□□□□ -1.3
SNCA-206ENST00000420646 IER3P46695 156 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 USF2Q15853 346 aaPredicted RBP6.91□□□□□ -1.3
SNCA-206ENST00000420646 C1orf122Q6ZSJ8 110 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 Q8N6K4 173 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 TMEM68Q96MH6 324 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 HIGD1AQ9Y241 93 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 TRAPPC1Q9Y5R8 145 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 TRAV40A0A0B4J280 105 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 C9JCJ5 164 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 GNG7O60262 68 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 NUPR1O60356 82 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 IGHV4-38-2P0DP08 117 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 UBE2E1P51965 193 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 KIAA1644Q3SXP7 199 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 Q56UQ5 140 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 CCDC144NLQ6NUI1 221 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 BAGE2Q86Y30 109 aa6.91□□□□□ -1.3
SNCA-206ENST00000420646 GAR1Q9NY12 217 aaKnown RBP6.91□□□□□ -1.3
SNCA-206ENST00000420646 IGHV3OR16-13A0A075B7E8 117 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 IGHV3-74A0A0B4J1X5 117 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms