RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CYYR1Q96J86 154 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 CDX2Q99626 313 aaPredicted RBP1.99□□□□□ -2.09
VPS41-206ENST00000418457 PMCHL2Q9BQD1 86 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 FAM173AQ9BQD7 235 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 SRXN1Q9BYN0 137 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 COMMD5Q9GZQ3 224 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 ST20Q9HBF5 79 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 TUBG2Q9NRH3 451 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 PRR34Q9NV39 138 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 MTCH1Q9NZJ7 389 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 TRAPPC2LQ9UL33 140 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 SOX21Q9Y651 276 aaPredicted RBP1.99□□□□□ -2.09
VPS41-206ENST00000418457 CUL9Q8IWT3 2517 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 DCHS1Q96JQ0 3298 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 MYO7AQ13402 2215 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 DNAH14Q0VDD8 3507 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 PCDH15Q96QU1 1955 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 IGHV1-45A0A0A0MS14 117 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 IGHV3-15A0A0B4J1V0 119 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 A0A0U1RRA0 63 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 A0A1W2PRE2 83 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 SMIM27A0A1W2PRY6 76 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 IGLC7A0M8Q6 106 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 TMEM89A2RUT3 159 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 GRIFINA4D1Z8 144 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 C5orf49A4QMS7 147 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 IZUMO1RA6ND01 250 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 HELTA6NFD8 242 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 EPOPA6NHQ4 379 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 CXCL13O43927 109 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 NUPR1O60356 82 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 RAMP3O60896 148 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 HYPMO75409 117 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 OR2J3O76001 311 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 TNFSF15O95150 251 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 OR2H2O95918 312 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 HAND1O96004 215 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 IGHV3-9P01782 118 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 HLA-DRB1P01911 266 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 APCSP02743 223 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 OR5AL1P0C617 328 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 C3orf79P0CE67 100 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 ARL14EPLP0DKL9 152 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 CCL3P10147 92 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 HNF1AP20823 631 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 CBLN1P23435 193 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 GCHFRP30047 84 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 CEACAM3P40198 252 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 ATP5G3P48201 142 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 CLDN18P56856 261 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 MLF1P58340 268 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 RPL31P62899 125 aaKnown RBP1.98□□□□□ -2.09
VPS41-206ENST00000418457 RHOGP84095 191 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 EIF4EBP1Q13541 118 aaPredicted RBP1.98□□□□□ -2.09
VPS41-206ENST00000418457 MMDQ15546 238 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 CLEC12BQ2HXU8 276 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 PSMG4Q5JS54 123 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 C1orf185Q5T7R7 199 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 MRPL54Q6P161 138 aaKnown RBP1.98□□□□□ -2.09
VPS41-206ENST00000418457 Q6P435 159 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 TMEM136Q6ZRR5 245 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 SHISA6Q6ZSJ9 500 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 FAM231DQ6ZW35 169 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 MUC15Q8N387 334 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 Q8N7P7 452 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 Q8N976 141 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 KLHL30-AS1Q8NEE0 82 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 OR2M7Q8NG81 312 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 OR10D3Q8NH80 312 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 OR1L1Q8NH94 360 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 APH1AQ96BI3 265 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 CHCHD1Q96BP2 118 aaKnown RBP1.98□□□□□ -2.09
VPS41-206ENST00000418457 FAM122AQ96E09 287 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 IMMP1LQ96LU5 166 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 OR2V2Q96R30 315 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 TMEM70Q9BUB7 260 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 MRPL32Q9BYC8 188 aaKnown RBP1.98□□□□□ -2.09
VPS41-206ENST00000418457 OR2D2Q9H210 308 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 MS4A6AQ9H2W1 248 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 NPVFQ9HCQ7 196 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 ESM1Q9NQ30 184 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 ZNF331Q9NQX6 463 aaPredicted RBP1.98□□□□□ -2.09
VPS41-206ENST00000418457 OR1A1Q9P1Q5 309 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 B4GALT7Q9UBV7 327 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 CLN8Q9UBY8 286 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 NAT8BQ9UHF3 227 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 BOKQ9UMX3 212 aaPredicted RBP1.98□□□□□ -2.09
VPS41-206ENST00000418457 V9GYV3 84 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 ZNF318Q5VUA4 2279 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 CFAP54Q96N23 3096 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 VPS13AQ96RL7 3174 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 SEC16AO15027 2179 aa1.98□□□□□ -2.09
VPS41-206ENST00000418457 NCKAP5O14513 1909 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 TRIOO75962 3097 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 CEP290O15078 2479 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 F5P12259 2224 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 KIAA0100Q14667 2235 aaKnown RBP1.97□□□□□ -2.09
VPS41-206ENST00000418457 TRBV20OR9-2A0A075B6H5 130 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 TRAV38-1A0A0B4J264 116 aa1.97□□□□□ -2.09
VPS41-206ENST00000418457 SERTM2A0A1B0GWG4 89 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms