RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 CHODLQ9H9P2 273 aa9.52□□□□□ -0.88
LIMK1-202ENST00000418310 GRNP28799 593 aaKnown RBP9.52□□□□□ -0.89
LIMK1-202ENST00000418310 C22orf15Q8WYQ4 148 aa9.52□□□□□ -0.89
LIMK1-202ENST00000418310 LINC00574Q9H8X3 128 aa9.52□□□□□ -0.89
LIMK1-202ENST00000418310 ONECUT1Q9UBC0 465 aa9.52□□□□□ -0.89
LIMK1-202ENST00000418310 MUC21A0A0G2JKD1 596 aa9.52□□□□□ -0.89
LIMK1-202ENST00000418310 IGHV1-69-2A0A0G2JMI3 117 aa9.52□□□□□ -0.89
LIMK1-202ENST00000418310 MUC21A0A140T8X8 626 aa9.52□□□□□ -0.89
LIMK1-202ENST00000418310 HYPMO75409 117 aa9.52□□□□□ -0.89
LIMK1-202ENST00000418310 MUC21Q5SSG8 566 aa9.52□□□□□ -0.89
LIMK1-202ENST00000418310 GOLT1AQ6ZVE7 132 aa9.52□□□□□ -0.89
LIMK1-202ENST00000418310 C17orf77Q96MU5 243 aa9.52□□□□□ -0.89
LIMK1-202ENST00000418310 PMCHL2Q9BQD1 86 aa9.52□□□□□ -0.89
LIMK1-202ENST00000418310 C20orf144Q9BQM9 153 aa9.52□□□□□ -0.89
LIMK1-202ENST00000418310 Q9H3A6 140 aa9.52□□□□□ -0.89
LIMK1-202ENST00000418310 NCOR2Q9Y618 2525 aa9.51□□□□□ -0.89
LIMK1-202ENST00000418310 IGHV3OR16-8A0A075B7F1 116 aa9.51□□□□□ -0.89
LIMK1-202ENST00000418310 HNRNPA3P51991 378 aaKnown RBP9.51□□□□□ -0.89
LIMK1-202ENST00000418310 OR10J3Q5JRS4 329 aa9.51□□□□□ -0.89
LIMK1-202ENST00000418310 LINC00173Q6ZV60 143 aa9.51□□□□□ -0.89
LIMK1-202ENST00000418310 DAZAP1Q96EP5 407 aaKnown RBP9.51□□□□□ -0.89
LIMK1-202ENST00000418310 OR8B2Q96RD0 313 aa9.51□□□□□ -0.89
LIMK1-202ENST00000418310 TMEM133Q9H2Q1 129 aa9.51□□□□□ -0.89
LIMK1-202ENST00000418310 LPAR2Q9HBW0 351 aa9.51□□□□□ -0.89
LIMK1-202ENST00000418310 HIST1H1EP10412 219 aaKnown RBP9.51□□□□□ -0.89
LIMK1-202ENST00000418310 ESDP10768 282 aa9.51□□□□□ -0.89
LIMK1-202ENST00000418310 GRAMD2BQ96HH9 432 aa9.51□□□□□ -0.89
LIMK1-202ENST00000418310 CHD8Q9HCK8 2581 aa9.51□□□□□ -0.89
LIMK1-202ENST00000418310 IGHV2-26A0A0B4J1V2 119 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 P01737 135 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 PSG1P11464 419 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 TCTAP57738 103 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 EBLN2Q6P2I7 272 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 RPEQ96AT9 228 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 TMSB15BA0A087X1C1 80 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 IGHV3-35A0A0C4DH35 117 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.5□□□□□ -0.89
LIMK1-202ENST00000418310 HES1Q14469 280 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 TMEM155Q4W5P6 130 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 PNKDQ8N490 385 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 OR4B1Q8NGF8 309 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 ARL2-SNX15V9GYD0 113 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 IGHV3-23P01764 117 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 MRGPRG-AS1Q2M3A8 158 aa9.5□□□□□ -0.89
LIMK1-202ENST00000418310 COL8A1P27658 744 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 FSTL3O95633 263 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 PRRX1P54821 245 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 ARF6P62330 175 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 FOXC1Q12948 553 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 SSX8Q7RTT4 187 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 SPATA12Q7Z6I5 190 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 C11orf42Q8N5U0 333 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 Q8NA96 180 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 GTSF1Q8WW33 167 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 GPR82Q96P67 336 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 SIGLEC9Q9Y336 463 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 IGHV1-3A0A0C4DH29 117 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 VSTM5A8MXK1 200 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 SHISA9B4DS77 424 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 KLRD1Q13241 179 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 PPP1R27Q86WC6 154 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 STPG4Q8N801 248 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 SRSF12Q8WXF0 261 aaKnown RBP9.49□□□□□ -0.89
LIMK1-202ENST00000418310 MBD6Q96DN6 1003 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 ALKBH7Q9BT30 221 aaPredicted RBP9.49□□□□□ -0.89
LIMK1-202ENST00000418310 GOLT1BQ9Y3E0 138 aa9.49□□□□□ -0.89
LIMK1-202ENST00000418310 SPTBN4Q9H254 2564 aa9.48□□□□□ -0.89
LIMK1-202ENST00000418310 FAM181BA6NEQ2 426 aa9.48□□□□□ -0.89
LIMK1-202ENST00000418310 M0R3E3 92 aa9.48□□□□□ -0.89
LIMK1-202ENST00000418310 BCL6BQ8N143 479 aaPredicted RBP9.48□□□□□ -0.89
LIMK1-202ENST00000418310 RPP21Q9H633 154 aaKnown RBP9.48□□□□□ -0.89
LIMK1-202ENST00000418310 HIGD1AQ9Y241 93 aa9.48□□□□□ -0.89
LIMK1-202ENST00000418310 MC5RP33032 325 aa9.48□□□□□ -0.89
LIMK1-202ENST00000418310 THAP8Q8NA92 274 aa9.48□□□□□ -0.89
LIMK1-202ENST00000418310 RASL11BQ9BPW5 248 aa9.48□□□□□ -0.89
LIMK1-202ENST00000418310 PPIAL4CA0A0B4J2A2 164 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 CHEK1O14757 476 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 TCRAP04437 139 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 PPIAL4GP0DN37 164 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 IGLC2P0DOY2 106 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 IGLC3P0DOY3 106 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 DLX6P56179 175 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 C3orf36Q3SXR2 165 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 DMRTA1Q5VZB9 504 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 DLEU1O43261 78 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 TCF21O43680 179 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 ATP5IP56385 69 aaPredicted RBP9.47□□□□□ -0.89
LIMK1-202ENST00000418310 HBBP68871 147 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 TMEM30BQ3MIR4 351 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 GP9P14770 177 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 LGALS7P47929 136 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 PCP4P48539 62 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 ETFRF1Q6IPR1 90 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 UNQ5815/PRO19632Q6UWF5 114 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 UQCR10Q9UDW1 63 aa9.47□□□□□ -0.89
LIMK1-202ENST00000418310 hDV102S1A0JD36 115 aa9.46□□□□□ -0.89
LIMK1-202ENST00000418310 TIMM23O14925 209 aa9.46□□□□□ -0.89
LIMK1-202ENST00000418310 SFTPCP11686 197 aa9.46□□□□□ -0.89
LIMK1-202ENST00000418310 LDLRAD2Q5SZI1 272 aa9.46□□□□□ -0.89
LIMK1-202ENST00000418310 C5orf17Q8NAS9 161 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms