RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 HLA-DMBP28068 263 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 RNASE4P34096 147 aaKnown RBP2.73□□□□□ -1.97
RFC4-205ENST00000418288 ZNF816Q0VGE8 651 aaPredicted RBP2.73□□□□□ -1.97
RFC4-205ENST00000418288 ZNF79Q15937 498 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 WHAMMP3Q1A5X7 153 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 KRTAP21-3Q3LHN1 58 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 ZNF322Q6U7Q0 402 aaPredicted RBP2.73□□□□□ -1.97
RFC4-205ENST00000418288 TCTE3Q8IZS6 198 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 TSTD1Q8NFU3 115 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 CLDND2Q8NHS1 167 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 MUC7Q8TAX7 377 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 SMIM3Q9BZL3 60 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 CKLFQ9UBR5 152 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 NAT8BQ9UHF3 227 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 RBM7Q9Y580 266 aaKnown RBP2.73□□□□□ -1.97
RFC4-205ENST00000418288 TRAPPC1Q9Y5R8 145 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 COL18A1P39060 1754 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 LAMB2P55268 1798 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 KIDINS220Q9ULH0 1771 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 RRBP1Q9P2E9 1410 aaKnown RBP2.73□□□□□ -1.97
RFC4-205ENST00000418288 SAMD9Q5K651 1589 aa2.73□□□□□ -1.97
RFC4-205ENST00000418288 MAP1BP46821 2468 aaKnown RBP2.73□□□□□ -1.97
RFC4-205ENST00000418288 SPEF2Q9C093 1822 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 ADGRL2O95490 1459 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 WDFY4Q6ZS81 3184 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 PTPN23Q9H3S7 1636 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 RBBP6Q7Z6E9 1792 aaKnown RBP2.72□□□□□ -1.97
RFC4-205ENST00000418288 PAPPA2Q9BXP8 1791 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 LOC107984640A0A0U1RRK4 108 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 MDFIC2A0A1B0GVS7 189 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 GGT3PA6NGU5 568 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 FABP5P3A8MUU1 101 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 A8MWP6 167 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 C16orf90A8MZG2 172 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 TMEM256-PLSCR3K7ERE1 68 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 ZNF19P17023 458 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 FXYD7P58549 80 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 NDPQ00604 133 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 MEF2BQ02080 365 aaPredicted RBP2.72□□□□□ -1.97
RFC4-205ENST00000418288 ARHGEF5Q12774 1597 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 FAM229BQ4G0N7 80 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 LDLRAD2Q5SZI1 272 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 RPRMLQ8N4K4 120 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 ST20-AS1Q8NBB2 130 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 UBALD1Q8TB05 177 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 C12orf57Q99622 126 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 LXNQ9BS40 222 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 MCTS1Q9ULC4 181 aaKnown RBP2.72□□□□□ -1.97
RFC4-205ENST00000418288 ASPMQ8IZT6 3477 aa2.72□□□□□ -1.97
RFC4-205ENST00000418288 PLEKHH2Q8IVE3 1493 aa2.71□□□□□ -1.97
RFC4-205ENST00000418288 PCM1Q15154 2024 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 HTTP42858 3142 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 ODAMA1E959 279 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 TMEM212A6NML5 194 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 H3BQ85 93 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 C19orf84I3L1E1 186 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 LYZL6O75951 148 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 UCHL1P09936 223 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 CISD3P0C7P0 127 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 HIST1H4AP62805 103 aaKnown RBP2.71□□□□□ -1.98
RFC4-205ENST00000418288 EMX2Q04743 252 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 HNRNPA0Q13151 305 aaKnown RBP2.71□□□□□ -1.98
RFC4-205ENST00000418288 MSMO1Q15800 293 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 SPANXN3Q5MJ09 141 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 HAGHLQ6PII5 290 aaPredicted RBP2.71□□□□□ -1.98
RFC4-205ENST00000418288 TMEM14EPQ6UXP3 125 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 PHF5AQ7RTV0 110 aaKnown RBP2.71□□□□□ -1.98
RFC4-205ENST00000418288 LYZL2Q7Z4W2 148 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 OR8D4Q8NGM9 314 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 OR2T10Q8NGZ9 312 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 SMCR5Q8TEV8 140 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 TP53RKQ96S44 253 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 MGLLQ99685 303 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 PRADC1Q9BSG0 188 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 MRPL32Q9BYC8 188 aaKnown RBP2.71□□□□□ -1.98
RFC4-205ENST00000418288 LINC00470Q9BZP3 86 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 LPAR5Q9H1C0 372 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 SMDT1Q9H4I9 107 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 OR5AC2Q9NZP5 309 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 ZNF443Q9Y2A4 671 aaPredicted RBP2.71□□□□□ -1.98
RFC4-205ENST00000418288 ZFHX2Q9C0A1 2572 aaPredicted RBP2.71□□□□□ -1.98
RFC4-205ENST00000418288 QSER1Q2KHR3 1735 aa2.71□□□□□ -1.98
RFC4-205ENST00000418288 ZNF638Q14966 1978 aaKnown RBP2.7□□□□□ -1.98
RFC4-205ENST00000418288 KALRNO60229 2985 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 KIAA1107Q9UPP5 1409 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 NCOR2Q9Y618 2525 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 XIRP2A4UGR9 3374 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 IGLV4-69A0A075B6H9 119 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 IGHV3-73A0A0B4J1V6 119 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 C9orf170A2RU37 121 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 C17orf98A8MV24 154 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 M0R2Z0 102 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 GNG7O60262 68 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 DPM2O94777 84 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 MT-ND4LP03901 98 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 CXCL1P09341 107 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 S100A4P26447 101 aaKnown RBP2.7□□□□□ -1.98
RFC4-205ENST00000418288 RPS25P62851 125 aaKnown RBP2.7□□□□□ -1.98
RFC4-205ENST00000418288 SELENOWP63302 87 aa2.7□□□□□ -1.98
RFC4-205ENST00000418288 VMA21Q3ZAQ7 101 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms