RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 MAPK1IP1LQ8NDC0 245 aa10.83□□□□□ -0.68
BDNF-208ENST00000418212 FAM215AQ9Y5M1 114 aa10.83□□□□□ -0.68
BDNF-208ENST00000418212 A0A1B0GUT8 65 aa10.83□□□□□ -0.68
BDNF-208ENST00000418212 PMS2P5A8MQ11 134 aa10.83□□□□□ -0.68
BDNF-208ENST00000418212 RPL24P83731 157 aaKnown RBP10.83□□□□□ -0.68
BDNF-208ENST00000418212 SPATA45Q537H7 98 aa10.83□□□□□ -0.68
BDNF-208ENST00000418212 TMEM14EPQ6UXP3 125 aa10.83□□□□□ -0.68
BDNF-208ENST00000418212 MIEN1Q9BRT3 115 aa10.83□□□□□ -0.68
BDNF-208ENST00000418212 KIAA1671Q9BY89 1806 aa10.83□□□□□ -0.68
BDNF-208ENST00000418212 C2orf16Q68DN1 1984 aa10.83□□□□□ -0.68
BDNF-208ENST00000418212 M0R3E3 92 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 PSG1P11464 419 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 UQCRFS1P47985 274 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 CFAP161Q6P656 301 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 VMO1Q7Z5L0 202 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 MAP1LC3AQ9H492 121 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 YAE1D1Q9NRH1 226 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 EPG5Q9HCE0 2579 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 IGKV3OR2-268A0A0C4DH90 116 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 TMEM50AO95807 157 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 AREGP15514 252 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 ZNF56Q15929 161 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 OR1N2Q8NGR9 330 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 ITLN2Q8WWU7 325 aaPredicted RBP10.82□□□□□ -0.68
BDNF-208ENST00000418212 SMIM12Q96EX1 92 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 CHD7Q9P2D1 2997 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 SRSF7Q16629 238 aaKnown RBP eCLIP10.82□□□□□ -0.68
BDNF-208ENST00000418212 RRN3P1Q2M238 152 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 ZNF329Q86UD4 541 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 Q8NFD4 153 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 MBNL3Q9NUK0 354 aaKnown RBP10.82□□□□□ -0.68
BDNF-208ENST00000418212 HERVK_113P61574 105 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 C15orf32Q32M92 178 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 ARHGAP21Q5T5U3 1957 aa10.82□□□□□ -0.68
BDNF-208ENST00000418212 DNLZQ5SXM8 178 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 C1orf194Q5T5A4 169 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 SPTBN5Q9NRC6 3674 aaKnown RBP10.81□□□□□ -0.68
BDNF-208ENST00000418212 MED12LQ86YW9 2145 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 H3BUX3 64 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 PF4P02776 101 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 PSMB2P49721 201 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 RPL15P61313 204 aaKnown RBP10.81□□□□□ -0.68
BDNF-208ENST00000418212 EXOC3-AS1Q8N2X6 119 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 COL25A1Q9BXS0 654 aaPredicted RBP10.81□□□□□ -0.68
BDNF-208ENST00000418212 TRBV6-6A0A0A6YYG2 114 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 J3QR89 54 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 PRSS2P07478 247 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 C16orf54Q6UWD8 224 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 SLC25A48Q6ZT89 311 aaKnown RBP10.81□□□□□ -0.68
BDNF-208ENST00000418212 MBD3L1Q8WWY6 194 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 RAX2Q96IS3 184 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 EPDR1Q9UM22 224 aa10.81□□□□□ -0.68
BDNF-208ENST00000418212 WIPF3A6NGB9 483 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 C15orf62A8K5M9 175 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 H0YJW9 148 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 CRXO43186 299 aaPredicted RBP10.8□□□□□ -0.68
BDNF-208ENST00000418212 ZNF324O75467 553 aaPredicted RBP10.8□□□□□ -0.68
BDNF-208ENST00000418212 FBLN7Q53RD9 439 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 PRSS33Q8NF86 280 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 OR10AG1Q8NH19 301 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 SCRT1Q9BWW7 348 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 UQCR10Q9UDW1 63 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 ZFP30Q9Y2G7 519 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 CEACAM4O75871 244 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 FAM71F2Q6NXP2 309 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 MGST2Q99735 147 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 AGMATQ9BSE5 352 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 A0A1W2PRE2 83 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 SNAI2O43623 268 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 STAG3L2P0CL84 134 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 STAG3L3P0CL85 134 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 RPS20P60866 119 aaKnown RBP10.8□□□□□ -0.68
BDNF-208ENST00000418212 CDC42EP3Q9UKI2 254 aa10.8□□□□□ -0.68
BDNF-208ENST00000418212 TRAV8-1A0A0A6YYK1 113 aa10.79□□□□□ -0.68
BDNF-208ENST00000418212 C7orf71A4D174 169 aa10.79□□□□□ -0.68
BDNF-208ENST00000418212 NPIPB5A8MRT5 1133 aa10.79□□□□□ -0.68
BDNF-208ENST00000418212 PIP4P1Q86T03 277 aa10.79□□□□□ -0.68
BDNF-208ENST00000418212 PMCHL2Q9BQD1 86 aa10.79□□□□□ -0.68
BDNF-208ENST00000418212 ZNF257Q9Y2Q1 563 aa10.79□□□□□ -0.68
BDNF-208ENST00000418212 PRUNE2Q8WUY3 3088 aa10.79□□□□□ -0.68
BDNF-208ENST00000418212 NUP37Q8NFH4 326 aa10.79□□□□□ -0.68
BDNF-208ENST00000418212 TNFRSF14Q92956 283 aa10.79□□□□□ -0.68
BDNF-208ENST00000418212 RPP21Q9H633 154 aaKnown RBP10.79□□□□□ -0.68
BDNF-208ENST00000418212 MMP23AO75900 390 aa10.79□□□□□ -0.68
BDNF-208ENST00000418212 RIPPLY3P57055 190 aa10.79□□□□□ -0.68
BDNF-208ENST00000418212 LDLRAD2Q5SZI1 272 aa10.79□□□□□ -0.68
BDNF-208ENST00000418212 NPFFR1Q9GZQ6 430 aa10.79□□□□□ -0.68
BDNF-208ENST00000418212 TBL2Q9Y4P3 447 aaKnown RBP10.79□□□□□ -0.68
BDNF-208ENST00000418212 F11RQ9Y624 299 aaKnown RBP10.79□□□□□ -0.68
BDNF-208ENST00000418212 WISP2O76076 250 aa10.78□□□□□ -0.68
BDNF-208ENST00000418212 TPTE2P1Q5T6R2 138 aa10.78□□□□□ -0.68
BDNF-208ENST00000418212 SIGLEC9Q9Y336 463 aa10.78□□□□□ -0.68
BDNF-208ENST00000418212 TRBV24-1A0A075B6N3 115 aa10.78□□□□□ -0.68
BDNF-208ENST00000418212 H7C2G1 150 aa10.78□□□□□ -0.68
BDNF-208ENST00000418212 AMMECR1LQ6DCA0 310 aa10.78□□□□□ -0.68
BDNF-208ENST00000418212 SYT8Q8NBV8 401 aa10.78□□□□□ -0.68
BDNF-208ENST00000418212 TMEM167AQ8TBQ9 72 aa10.78□□□□□ -0.68
BDNF-208ENST00000418212 A0A1W2PNU3 283 aaPredicted RBP10.78□□□□□ -0.68
BDNF-208ENST00000418212 TSPOP30536 169 aa10.78□□□□□ -0.68
BDNF-208ENST00000418212 IGFL4Q6B9Z1 124 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms