RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 WFDC9Q8NEX5 89 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 OR52E2Q8NGJ4 325 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 OR9G4Q8NGQ1 327 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 OR5H2Q8NGV7 314 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 OR10D3Q8NH80 312 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 OR1L1Q8NH94 360 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 VSTM2AQ8TAG5 236 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 C18orf32Q8TCD1 76 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 RDH5Q92781 318 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 KCNS1Q96KK3 526 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 DERL3Q96Q80 235 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 LMF2Q9BU23 707 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 CHST6Q9GZX3 395 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 OR2D2Q9H210 308 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 SPANXB1Q9NS25 103 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 AK3Q9UIJ7 227 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 VSIG4Q9Y279 399 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 WASHC3Q9Y3C0 194 aa4.37□□□□□ -1.71
ECHDC1-206ENST00000417628 HERC1Q15751 4861 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF816-ZNF321PA0A0X1KG74 233 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 A0A1W2PRE2 83 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 A6NIN4 97 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 F5H768 121 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 J3KT08 172 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 P2RY10O00398 339 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 FFAR1O14842 300 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 HMGB3O15347 200 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 RS1O15537 224 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 CRXO43186 299 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 SOX14O95416 240 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 MOSP00540 346 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 KRASP01116 189 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 PRH1P02810 166 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 CT45A10P0DMU9 189 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 PMCHP20382 165 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 IL3RAP26951 378 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 CDKN2AP42771 156 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 RPS11P62280 158 aaKnown RBP eCLIP4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF117Q03924 483 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 FUT5Q11128 374 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 EDDM3AQ14507 147 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 INSL4Q14641 139 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF260Q3ZCT1 412 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 PSMG4Q5JS54 123 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 HOGA1Q86XE5 327 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 RNF128Q8TEB7 428 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 SSMEM1Q8WWF3 244 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 MAL2Q969L2 176 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 C10orf35Q96D05 121 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 SEC22AQ96IW7 307 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 EBPLQ9BY08 206 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 PRSS22Q9GZN4 317 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 ANXA10Q9UJ72 324 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 LINC00312Q9Y6C7 94 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 HEATR5BQ9P2D3 2071 aa4.36□□□□□ -1.71
ECHDC1-206ENST00000417628 LOC102724200A0A096LPH7 203 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 TRAV40A0A0B4J280 105 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 MUC21A0A0G2JKD1 596 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 A0A0G2JLM5 398 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 TRBV5-5A0A0J9YX44 114 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 MUC21A0A140T8X8 626 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 A0A1W2PP11 408 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 A0A1W2PPM0 123 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 DAPL1A0PJW8 107 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 CXCL13O43927 109 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF324O75467 553 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 SERF1AO75920 110 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 CRYGDP07320 174 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 FABP2P12104 132 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 CRISP2P16562 243 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 COL8A2P25067 703 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 LIM2P55344 173 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 DLX6P56179 175 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 RPL27P61353 136 aaKnown RBP4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 ACSM2AQ08AH3 577 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 MPV17L2Q567V2 206 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 MUC21Q5SSG8 566 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 UTF1Q5T230 341 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 FAM27D1Q5T7N8 215 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 ACSM2BQ68CK6 577 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 GLIPR1L1Q6UWM5 242 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 DGAT2L6Q6ZPD8 337 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 TMEM256Q8N2U0 113 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 ZNF433Q8N7K0 673 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 SCCPDHQ8NBX0 429 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 OR10G9Q8NGN4 311 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 OR10G8Q8NGN5 311 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 OR4A5Q8NH83 315 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 FAM213BQ8TBF2 198 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 MBD3L1Q8WWY6 194 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 TMEM37Q8WXS4 190 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 LSM10Q969L4 123 aaKnown RBP4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 COQ2Q96H96 371 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 TSSK2Q96PF2 358 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 GFI1Q99684 422 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 TM2D1Q9BX74 207 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 MAP1LC3AQ9H492 121 aa4.35□□□□□ -1.71
ECHDC1-206ENST00000417628 C1orf123Q9NWV4 160 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms