RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 RIMBP3BA6NNM3 1639 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 RIMBP3Q9UFD9 1639 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 NAV2Q8IVL1 2488 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 ZNF106Q9H2Y7 1883 aaKnown RBP0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 A0A087WSZ3 146 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 IGHV1-58A0A0C4DH39 117 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 A0A0D9SG42 100 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 TCRBV4S1A1TA0A5B7 111 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 FUOMA2VDF0 154 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 C7orf71A4D174 169 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 TLCD2A6NGC4 264 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 TMEM210A6NLX4 147 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 E7EUB6 86 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 K7ERJ3 54 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 NDUFB3O43676 98 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 NUPR1O60356 82 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 TIMM17BO60830 172 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 S100A6P06703 90 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 CD2P06729 351 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 CXCL1P09341 107 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 FREM3P0C091 2139 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 S100A4P26447 101 aaKnown RBP0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 ERP29P30040 261 aaKnown RBP0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 DYNLT3P51808 116 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 CEBPGP53567 150 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 HSPE1P61604 102 aaKnown RBP0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 EIF5AP63241 154 aaKnown RBP0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 PSG9Q00887 426 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 MSMO1Q15800 293 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 MPV17LQ2QL34 196 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 DEFB115Q30KQ5 88 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 C22orf39Q6P5X5 142 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 DHRS4L2Q6PKH6 230 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 GLIPR1L1Q6UWM5 242 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 TMEM14EPQ6UXP3 125 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 GOLT1AQ6ZVE7 132 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 LINC00301Q8NCQ3 95 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR2T10Q8NGZ9 312 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 GNPDA2Q8TDQ7 276 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 LINC00052Q96N35 136 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 GPX7Q96SL4 187 aaPredicted RBP0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 AMELYQ99218 206 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 CMSS1Q9BQ75 279 aaKnown RBP0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 TMEM70Q9BUB7 260 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 GGACTQ9BVM4 153 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 CCDC94Q9BW85 323 aaPredicted RBP0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 PSTPIP2Q9H939 334 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 NMNAT1Q9HAN9 279 aaPredicted RBP0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 ENY2Q9NPA8 101 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 SS18L2Q9UHA2 77 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 PCTPQ9UKL6 214 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 RNF11Q9Y3C5 154 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 FAM32AQ9Y421 112 aaKnown RBP0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 ARHGEF28Q8N1W1 1705 aaKnown RBP0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 KCPQ6ZWJ8 1503 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 IGSF10Q6WRI0 2623 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 TNRC6AQ8NDV7 1962 aaKnown RBP0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 SCN3AQ9NY46 2000 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 TRAV10A0A0B4J240 114 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 ODAMA1E959 279 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 SMIM23A6NLE4 172 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 A8MWV9 139 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 J3QRK9 145 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 HMGB3O15347 200 aaKnown RBP0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 MFSD11O43934 449 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 CST8O60676 142 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 E2F6O75461 281 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 DNAL4O96015 105 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 CSN2P05814 226 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 HLA-EP13747 358 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 IL9P15248 144 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 SRP14P37108 136 aaKnown RBP0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 ARPP19P56211 112 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 DSCR4P56555 118 aaPredicted RBP0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 NCALDP61601 193 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 RHOBP62745 196 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 GNG5P63218 68 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 KRR1Q13601 381 aaKnown RBP0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 LTC4SQ16873 150 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 LIN52Q52LA3 116 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 HACD4Q5VWC8 232 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 LINC00322Q6ZN03 302 aaPredicted RBP0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 SMIM20Q8N5G0 67 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 MNS1Q8NEH6 495 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 PPTC7Q8NI37 304 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 FAM172AQ8WUF8 416 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 PSMF1Q92530 271 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 POP5Q969H6 163 aaKnown RBP0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 BORCS5Q969J3 196 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 RAB37Q96AX2 223 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 ZHX1-C8orf76Q96EF9 292 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 GPER1Q99527 375 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 HOPXQ9BPY8 73 aaPredicted RBP0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 PAIP2Q9BPZ3 127 aaKnown RBP0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 SLC25A21Q9BQT8 299 aaPredicted RBP0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 NPCDR1Q9BY65 106 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 C6orf62Q9GZU0 229 aaPredicted RBP0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 C10orf95Q9H7T3 257 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 C14orf132Q9NPU4 83 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 CACNA1EQ15878 2313 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms