RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 KNCNA6PVL3 124 aa12.7□□□□□ -0.38
HSPG2-204ENST00000412328 FNDC10F2Z333 226 aa12.7□□□□□ -0.38
HSPG2-204ENST00000412328 K7EPK0 472 aa12.7□□□□□ -0.38
HSPG2-204ENST00000412328 FABP1P07148 127 aa12.7□□□□□ -0.38
HSPG2-204ENST00000412328 AKR1C1Q04828 323 aa12.7□□□□□ -0.38
HSPG2-204ENST00000412328 C1orf194Q5T5A4 169 aa12.7□□□□□ -0.38
HSPG2-204ENST00000412328 C12orf45Q8N5I9 185 aaPredicted RBP12.7□□□□□ -0.38
HSPG2-204ENST00000412328 SNRPGP15A8MWD9 76 aa12.69□□□□□ -0.38
HSPG2-204ENST00000412328 IL5P05113 134 aa12.69□□□□□ -0.38
HSPG2-204ENST00000412328 ATF4P18848 351 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-204ENST00000412328 PSMG4Q5JS54 123 aa12.69□□□□□ -0.38
HSPG2-204ENST00000412328 IL17DQ8TAD2 202 aa12.69□□□□□ -0.38
HSPG2-204ENST00000412328 GATAD1Q8WUU5 269 aa12.69□□□□□ -0.38
HSPG2-204ENST00000412328 SLC25A32Q9H2D1 315 aa12.69□□□□□ -0.38
HSPG2-204ENST00000412328 GSKIPQ9P0R6 139 aa12.69□□□□□ -0.38
HSPG2-204ENST00000412328 CFDP00746 253 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-204ENST00000412328 CA1P00915 261 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-204ENST00000412328 PLP1P60201 277 aa12.68□□□□□ -0.38
HSPG2-204ENST00000412328 MZT2BQ6NZ67 158 aa12.68□□□□□ -0.38
HSPG2-204ENST00000412328 GSG1LQ6UXU4 331 aa12.68□□□□□ -0.38
HSPG2-204ENST00000412328 CYP2G1PQ6ZSU1 146 aa12.68□□□□□ -0.38
HSPG2-204ENST00000412328 LCE6AA0A183 80 aa12.67□□□□□ -0.38
HSPG2-204ENST00000412328 H3BRN7 92 aa12.67□□□□□ -0.38
HSPG2-204ENST00000412328 RRAS2P62070 204 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-204ENST00000412328 NRARPQ7Z6K4 114 aa12.67□□□□□ -0.38
HSPG2-204ENST00000412328 STHQ8IWL8 128 aa12.67□□□□□ -0.38
HSPG2-204ENST00000412328 C11orf68Q9H3H3 251 aaKnown RBP12.67□□□□□ -0.38
HSPG2-204ENST00000412328 BATF3Q9NR55 127 aa12.67□□□□□ -0.38
HSPG2-204ENST00000412328 FBXL17Q9UF56 701 aa12.67□□□□□ -0.38
HSPG2-204ENST00000412328 SPP1P10451 314 aa12.66□□□□□ -0.38
HSPG2-204ENST00000412328 DEFB1P60022 68 aa12.66□□□□□ -0.38
HSPG2-204ENST00000412328 ACTL10Q5JWF8 245 aa12.66□□□□□ -0.38
HSPG2-204ENST00000412328 GDF5OSQ5U4N7 250 aa12.66□□□□□ -0.38
HSPG2-204ENST00000412328 CSNK1G2-AS1Q8NCQ2 148 aa12.66□□□□□ -0.38
HSPG2-204ENST00000412328 BPIFCQ8NFQ6 507 aa12.66□□□□□ -0.38
HSPG2-204ENST00000412328 C2orf50Q96LR7 162 aa12.66□□□□□ -0.38
HSPG2-204ENST00000412328 SMCO3A2RU48 225 aa12.65□□□□□ -0.38
HSPG2-204ENST00000412328 ZNF98A6NK75 572 aa12.65□□□□□ -0.38
HSPG2-204ENST00000412328 HLA-DRB4P13762 266 aa12.65□□□□□ -0.38
HSPG2-204ENST00000412328 PSMB3P49720 205 aa12.65□□□□□ -0.38
HSPG2-204ENST00000412328 SLC38A11Q08AI6 406 aa12.65□□□□□ -0.38
HSPG2-204ENST00000412328 Q8NAQ8 132 aa12.65□□□□□ -0.38
HSPG2-204ENST00000412328 OR10P1Q8NGE3 313 aa12.65□□□□□ -0.38
HSPG2-204ENST00000412328 ENKURQ8TC29 256 aa12.65□□□□□ -0.38
HSPG2-204ENST00000412328 GGACTQ9BVM4 153 aa12.65□□□□□ -0.38
HSPG2-204ENST00000412328 SCRT1Q9BWW7 348 aa12.65□□□□□ -0.38
HSPG2-204ENST00000412328 LSM5Q9Y4Y9 91 aaKnown RBP12.65□□□□□ -0.38
HSPG2-204ENST00000412328 HLA-DRB4X5D2U9 266 aa12.65□□□□□ -0.38
HSPG2-204ENST00000412328 FAM25EA8MYX2 175 aa12.64□□□□□ -0.39
HSPG2-204ENST00000412328 H3BMM0 161 aa12.64□□□□□ -0.39
HSPG2-204ENST00000412328 LINC00869P0C866 280 aa12.64□□□□□ -0.39
HSPG2-204ENST00000412328 SNRPD3P62318 126 aaKnown RBP12.64□□□□□ -0.39
HSPG2-204ENST00000412328 RAB32Q13637 225 aa12.64□□□□□ -0.39
HSPG2-204ENST00000412328 MORN3Q6PF18 240 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-204ENST00000412328 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.64□□□□□ -0.39
HSPG2-204ENST00000412328 PATE2Q6UY27 113 aa12.64□□□□□ -0.39
HSPG2-204ENST00000412328 MARVELD1Q9BSK0 173 aa12.64□□□□□ -0.39
HSPG2-204ENST00000412328 SHANK2-AS3Q9BTD1 123 aa12.64□□□□□ -0.39
HSPG2-204ENST00000412328 NPVFQ9HCQ7 196 aa12.64□□□□□ -0.39
HSPG2-204ENST00000412328 LYRM2Q9NU23 88 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-204ENST00000412328 PFDN2Q9UHV9 154 aa12.64□□□□□ -0.39
HSPG2-204ENST00000412328 X6R8D5 127 aa12.64□□□□□ -0.39
HSPG2-204ENST00000412328 IGSF23A1L1A6 192 aa12.63□□□□□ -0.39
HSPG2-204ENST00000412328 C5orf51A6NDU8 294 aa12.63□□□□□ -0.39
HSPG2-204ENST00000412328 ZNF705EA8MWA4 302 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-204ENST00000412328 DEDDO75618 318 aa12.63□□□□□ -0.39
HSPG2-204ENST00000412328 ORM2P19652 201 aa12.63□□□□□ -0.39
HSPG2-204ENST00000412328 SELENOTP62341 195 aa12.63□□□□□ -0.39
HSPG2-204ENST00000412328 VWC2Q2TAL6 325 aa12.63□□□□□ -0.39
HSPG2-204ENST00000412328 OR8I2Q8N0Y5 310 aa12.63□□□□□ -0.39
HSPG2-204ENST00000412328 OR1B1Q8NGR6 318 aa12.63□□□□□ -0.39
HSPG2-204ENST00000412328 OR11H2Q8NH07 326 aa12.63□□□□□ -0.39
HSPG2-204ENST00000412328 C20orf173Q96LM9 149 aa12.63□□□□□ -0.39
HSPG2-204ENST00000412328 MGST2Q99735 147 aa12.63□□□□□ -0.39
HSPG2-204ENST00000412328 RARRES2Q99969 163 aa12.63□□□□□ -0.39
HSPG2-204ENST00000412328 SLC25A39Q9BZJ4 359 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-204ENST00000412328 SAV1Q9H4B6 383 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-204ENST00000412328 DOK5Q9P104 306 aa12.63□□□□□ -0.39
HSPG2-204ENST00000412328 A8MTW9 85 aa12.62□□□□□ -0.39
HSPG2-204ENST00000412328 ISLRO14498 428 aa12.62□□□□□ -0.39
HSPG2-204ENST00000412328 MRPS12O15235 138 aaKnown RBP12.62□□□□□ -0.39
HSPG2-204ENST00000412328 TMEM41BQ5BJD5 291 aa12.62□□□□□ -0.39
HSPG2-204ENST00000412328 TEPPQ6URK8 271 aa12.62□□□□□ -0.39
HSPG2-204ENST00000412328 UHRF2Q96PU4 802 aa12.62□□□□□ -0.39
HSPG2-204ENST00000412328 TMEM147Q9BVK8 224 aa12.62□□□□□ -0.39
HSPG2-204ENST00000412328 MGAT4CQ9UBM8 478 aa12.62□□□□□ -0.39
HSPG2-204ENST00000412328 TRAV8-2A0A0B4J237 113 aa12.61□□□□□ -0.39
HSPG2-204ENST00000412328 FAM24AA6NFZ4 105 aa12.61□□□□□ -0.39
HSPG2-204ENST00000412328 AGPAT2O15120 278 aa12.61□□□□□ -0.39
HSPG2-204ENST00000412328 PRAF2O60831 178 aa12.61□□□□□ -0.39
HSPG2-204ENST00000412328 FOXI2Q6ZQN5 318 aa12.61□□□□□ -0.39
HSPG2-204ENST00000412328 ZNF709Q8N972 641 aa12.61□□□□□ -0.39
HSPG2-204ENST00000412328 PPP1R14BQ96C90 147 aa12.61□□□□□ -0.39
HSPG2-204ENST00000412328 CLUHP3Q96NS8 147 aa12.61□□□□□ -0.39
HSPG2-204ENST00000412328 SLC25A22Q9H936 323 aa12.61□□□□□ -0.39
HSPG2-204ENST00000412328 KMT2AQ03164 3969 aa12.6□□□□□ -0.39
HSPG2-204ENST00000412328 INMT-MINDY4F8WBC2 141 aa12.6□□□□□ -0.39
HSPG2-204ENST00000412328 L7N2F9 121 aa12.6□□□□□ -0.39
HSPG2-204ENST00000412328 CST7O76096 145 aa12.6□□□□□ -0.39
HSPG2-204ENST00000412328 MEOX2P50222 304 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms