RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 GDPD1Q8N9F7 314 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 IQUBQ8NA54 791 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 MLKLQ8NB16 471 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR7G2Q8NG99 324 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR8J2Q8NGG1 315 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR10T2Q8NGX3 314 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 SMIM4Q8WVI0 70 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 NXNL1Q96CM4 212 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 SLAMF6Q96DU3 332 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 MTMR9Q96QG7 549 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 SLF1Q9BQI6 1058 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 NDUFAF3Q9BU61 184 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 TMEM231Q9H6L2 316 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 CPSF2Q9P2I0 782 aaKnown RBP-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 C3orf18Q9UK00 162 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 PYCARDQ9ULZ3 195 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 TIMM10BQ9Y5J6 103 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 MED23Q9ULK4 1368 aa-2.62□□□□□ -2.83
RNU4-88P-201ENST00000411220 FAM74A7A6NL05 159 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 B4E171 279 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 M0R381 172 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 RGS16O15492 202 aaPredicted RBP-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 SSX5O60225 188 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 NDUFA3O95167 84 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 APOC1P02654 83 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 SMIM6P0DI80 62 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 FGF6P10767 208 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 MX1P20591 662 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 CDK2P24941 298 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 PHBP35232 272 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 DNAJB13P59910 316 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 RPS20P60866 119 aaKnown RBP-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 STXBP1P61764 594 aaKnown RBP-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 CDK6Q00534 326 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 MIR22HGQ0VDD5 57 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR5I1Q13606 314 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 CDNFQ49AH0 187 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 FAM74A3Q4VXF1 159 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 NMSQ5H8A3 153 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 FAM209BQ5JX69 171 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 BRMS1LQ5PSV4 323 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 PPM1LQ5SGD2 360 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 C3orf33Q6P1S2 294 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 LRRN1Q6UXK5 716 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 EIF3MQ7L2H7 374 aaKnown RBP-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 SPATA19Q7Z5L4 167 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 ARPINQ7Z6K5 226 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR2D3Q8NGH3 330 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR4K15Q8NH41 348 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 COX7B2Q8TF08 81 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 ARL5BQ96KC2 179 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 LXNQ9BS40 222 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 SPXQ9BT56 116 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 TPT1P8Q9HAU6 139 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 RAB9BQ9NP90 201 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 RGS18Q9NS28 235 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 FARSBQ9NSD9 589 aaKnown RBP-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 SS18L2Q9UHA2 77 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 PRO0628Q9UI54 55 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 LAMP5Q9UJQ1 280 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 VPS28Q9UK41 221 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 CAMK2AQ9UQM7 478 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 CRYL1Q9Y2S2 319 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 ECM29Q5VYK3 1845 aa-2.63□□□□□ -2.83
RNU4-88P-201ENST00000411220 TRAV2A0A0B4J234 112 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 C1orf232A0A0U1RR37 186 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 KBTBD11-OT1A0A1B0GTJ5 212 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 GOLGA8JA6NMD2 632 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 LRRIQ3A6PVS8 624 aaPredicted RBP-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 B4DEV8 164 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 GOLGA8KD6RF30 607 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 PPP5D1E7EU14 171 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 H0Y8G0 127 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 LST1O00453 97 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 LEPROTO15243 131 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 LYPLA2O95372 231 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 ATP6V1G2O95670 118 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 RBP1P09455 135 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 IFIT1P09914 478 aaKnown RBP-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 HIST1H1CP16403 213 aaKnown RBP-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 GABRB1P18505 474 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 IL11P20809 199 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 GALP22466 123 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 CASQ1P31415 396 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 FDFT1P37268 417 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 PSMB2P49721 201 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 GTF2A1P52655 376 aaPredicted RBP-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 DLX6P56179 175 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 UBE2L3P68036 154 aaKnown RBP-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 CXCL9Q07325 125 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 TMED1Q13445 227 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 DGUOKQ16854 277 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 HIKESHIQ53FT3 197 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 CTSL3PQ5NE16 218 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 TMEM78Q5T7P6 136 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 UBE2UQ5VVX9 321 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 NDUFA11Q86Y39 141 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 CCDC65Q8IXS2 484 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 CMTM8Q8IZV2 173 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR6K3Q8NGY3 331 aa-2.64□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms