RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 PRSS22Q9GZN4 317 aa12.64□□□□□ -0.39
HOXD3-202ENST00000410016 DCHS2Q6V1P9 2916 aa12.64□□□□□ -0.39
HOXD3-202ENST00000410016 I3L2K1 104 aa12.63□□□□□ -0.39
HOXD3-202ENST00000410016 COX7A1P24310 79 aa12.63□□□□□ -0.39
HOXD3-202ENST00000410016 NIT1Q86X76 327 aa12.63□□□□□ -0.39
HOXD3-202ENST00000410016 SRSF12Q8WXF0 261 aaKnown RBP12.63□□□□□ -0.39
HOXD3-202ENST00000410016 ZNF586Q9NXT0 402 aa12.63□□□□□ -0.39
HOXD3-202ENST00000410016 TPRP12270 2363 aaKnown RBP12.63□□□□□ -0.39
HOXD3-202ENST00000410016 M0R143 59 aa12.63□□□□□ -0.39
HOXD3-202ENST00000410016 PSG1P11464 419 aa12.63□□□□□ -0.39
HOXD3-202ENST00000410016 GRNP28799 593 aaKnown RBP12.63□□□□□ -0.39
HOXD3-202ENST00000410016 C5orf17Q8NAS9 161 aa12.63□□□□□ -0.39
HOXD3-202ENST00000410016 RPEQ96AT9 228 aa12.63□□□□□ -0.39
HOXD3-202ENST00000410016 MIEN1Q9BRT3 115 aa12.63□□□□□ -0.39
HOXD3-202ENST00000410016 PAM16Q9Y3D7 125 aa12.63□□□□□ -0.39
HOXD3-202ENST00000410016 LRBAP50851 2863 aa12.63□□□□□ -0.39
HOXD3-202ENST00000410016 H3BTX0 84 aa12.62□□□□□ -0.39
HOXD3-202ENST00000410016 TOMM40O96008 361 aa12.62□□□□□ -0.39
HOXD3-202ENST00000410016 LTAP01374 205 aa12.62□□□□□ -0.39
HOXD3-202ENST00000410016 KRTDAPP60985 99 aa12.62□□□□□ -0.39
HOXD3-202ENST00000410016 RNF5Q99942 180 aa12.62□□□□□ -0.39
HOXD3-202ENST00000410016 Q9H3A6 140 aa12.62□□□□□ -0.39
HOXD3-202ENST00000410016 MRPL27Q9P0M9 148 aaKnown RBP12.62□□□□□ -0.39
HOXD3-202ENST00000410016 A0A1B0GXF2 115 aa12.62□□□□□ -0.39
HOXD3-202ENST00000410016 TCRAP04437 139 aa12.62□□□□□ -0.39
HOXD3-202ENST00000410016 PMCHP20382 165 aa12.62□□□□□ -0.39
HOXD3-202ENST00000410016 CA7P43166 264 aa12.62□□□□□ -0.39
HOXD3-202ENST00000410016 FOXC1Q12948 553 aa12.62□□□□□ -0.39
HOXD3-202ENST00000410016 VAMP8Q9BV40 100 aa12.62□□□□□ -0.39
HOXD3-202ENST00000410016 PTPRQQ9UMZ3 2332 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 C19orf71A6NCJ1 209 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 DIRC3C9JPN6 131 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 OR2J3O76001 311 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 ZNF672Q499Z4 452 aaPredicted RBP12.61□□□□□ -0.39
HOXD3-202ENST00000410016 FAM19A2Q8N3H0 131 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 LY6G5BQ8NDX9 201 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 FMC1Q96HJ9 113 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 SCNM1Q9BWG6 230 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 HIGD1AQ9Y241 93 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 IGKV1-17P01599 117 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 FBXL19-AS1Q494R0 122 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 ATP5L2Q7Z4Y8 100 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 WNT10AQ9GZT5 417 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 RPH3ALQ9UNE2 315 aa12.61□□□□□ -0.39
HOXD3-202ENST00000410016 TMEM11P17152 192 aa12.6□□□□□ -0.39
HOXD3-202ENST00000410016 KLF5Q13887 457 aaPredicted RBP12.6□□□□□ -0.39
HOXD3-202ENST00000410016 CYB5R2Q6BCY4 276 aa12.6□□□□□ -0.39
HOXD3-202ENST00000410016 ZNF705AQ6ZN79 300 aaPredicted RBP12.6□□□□□ -0.39
HOXD3-202ENST00000410016 ALKBH7Q9BT30 221 aaPredicted RBP12.6□□□□□ -0.39
HOXD3-202ENST00000410016 SSBP4Q9BWG4 385 aaPredicted RBP12.6□□□□□ -0.39
HOXD3-202ENST00000410016 SLC25A39Q9BZJ4 359 aaPredicted RBP12.6□□□□□ -0.39
HOXD3-202ENST00000410016 ABCA4P78363 2273 aa12.6□□□□□ -0.39
HOXD3-202ENST00000410016 C3orf79P0CE67 100 aa12.59□□□□□ -0.39
HOXD3-202ENST00000410016 LYZP61626 148 aa12.59□□□□□ -0.39
HOXD3-202ENST00000410016 ANKHD1Q8IWZ3 2542 aaKnown RBP12.59□□□□□ -0.39
HOXD3-202ENST00000410016 GTSF1Q8WW33 167 aa12.59□□□□□ -0.39
HOXD3-202ENST00000410016 RPP21Q9H633 154 aaKnown RBP12.59□□□□□ -0.39
HOXD3-202ENST00000410016 TMEM14CQ9P0S9 112 aa12.59□□□□□ -0.39
HOXD3-202ENST00000410016 TIMM23O14925 209 aa12.59□□□□□ -0.39
HOXD3-202ENST00000410016 CTRLP40313 264 aa12.59□□□□□ -0.39
HOXD3-202ENST00000410016 GPR6P46095 362 aaPredicted RBP12.59□□□□□ -0.39
HOXD3-202ENST00000410016 CAMPP49913 170 aa12.59□□□□□ -0.39
HOXD3-202ENST00000410016 CT83Q5H943 113 aa12.59□□□□□ -0.39
HOXD3-202ENST00000410016 TCF24Q7RTU0 167 aa12.59□□□□□ -0.39
HOXD3-202ENST00000410016 SRSF8Q9BRL6 282 aaKnown RBP12.59□□□□□ -0.39
HOXD3-202ENST00000410016 ZNF492Q9P255 531 aa12.59□□□□□ -0.39
HOXD3-202ENST00000410016 GOLT1BQ9Y3E0 138 aa12.59□□□□□ -0.39
HOXD3-202ENST00000410016 FAM90A27PA6NNH2 459 aa12.58□□□□□ -0.4
HOXD3-202ENST00000410016 K7EIM0 57 aa12.58□□□□□ -0.4
HOXD3-202ENST00000410016 A6NNC1 897 aa12.58□□□□□ -0.4
HOXD3-202ENST00000410016 IGLV2-11P01706 119 aa12.58□□□□□ -0.4
HOXD3-202ENST00000410016 MMDQ15546 238 aa12.58□□□□□ -0.4
HOXD3-202ENST00000410016 OR4B1Q8NGF8 309 aa12.58□□□□□ -0.4
HOXD3-202ENST00000410016 OR8B3Q8NGG8 313 aa12.58□□□□□ -0.4
HOXD3-202ENST00000410016 OR8B2Q96RD0 313 aa12.58□□□□□ -0.4
HOXD3-202ENST00000410016 OTORQ9NRC9 128 aa12.58□□□□□ -0.4
HOXD3-202ENST00000410016 PRSS47A8MTI9 375 aa12.57□□□□□ -0.4
HOXD3-202ENST00000410016 A8MWL6 223 aa12.57□□□□□ -0.4
HOXD3-202ENST00000410016 LY6HO94772 140 aa12.57□□□□□ -0.4
HOXD3-202ENST00000410016 LIPFP07098 398 aa12.57□□□□□ -0.4
HOXD3-202ENST00000410016 MRPL52Q86TS9 123 aaKnown RBP12.57□□□□□ -0.4
HOXD3-202ENST00000410016 RASL11BQ9BPW5 248 aa12.57□□□□□ -0.4
HOXD3-202ENST00000410016 ONECUT1Q9UBC0 465 aa12.57□□□□□ -0.4
HOXD3-202ENST00000410016 TRAV8-1A0A0A6YYK1 113 aa12.57□□□□□ -0.4
HOXD3-202ENST00000410016 HOXB4P17483 251 aaPredicted RBP12.57□□□□□ -0.4
HOXD3-202ENST00000410016 PLGLAQ15195 96 aa12.57□□□□□ -0.4
HOXD3-202ENST00000410016 CDSNQ15517 529 aa12.57□□□□□ -0.4
HOXD3-202ENST00000410016 NPIPB6E9PJ23 425 aa12.56□□□□□ -0.4
HOXD3-202ENST00000410016 P01737 135 aa12.56□□□□□ -0.4
HOXD3-202ENST00000410016 NTF3P20783 257 aa12.56□□□□□ -0.4
HOXD3-202ENST00000410016 EXOC3-AS1Q8N2X6 119 aa12.56□□□□□ -0.4
HOXD3-202ENST00000410016 OR11H6Q8NGC7 330 aa12.56□□□□□ -0.4
HOXD3-202ENST00000410016 CFHR4Q92496 578 aa12.56□□□□□ -0.4
HOXD3-202ENST00000410016 CSMD1Q96PZ7 3565 aa12.56□□□□□ -0.4
HOXD3-202ENST00000410016 SPTA1P02549 2419 aa12.56□□□□□ -0.4
HOXD3-202ENST00000410016 ZNF785A8K8V0 405 aa12.56□□□□□ -0.4
HOXD3-202ENST00000410016 DLEU1O43261 78 aa12.56□□□□□ -0.4
HOXD3-202ENST00000410016 CNIH1O95406 144 aa12.56□□□□□ -0.4
HOXD3-202ENST00000410016 HBBP68871 147 aa12.56□□□□□ -0.4
HOXD3-202ENST00000410016 Q71RC1 249 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms