RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 ZNF562Q6V9R5 426 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 FOXC2Q99958 501 aa7.4□□□□□ -1.22
PBRM1-208ENST00000410007 TRAV8-6A0A0B4J262 113 aa7.4□□□□□ -1.23
PBRM1-208ENST00000410007 IFI27P40305 119 aaPredicted RBP7.4□□□□□ -1.23
PBRM1-208ENST00000410007 Q6ZR03 302 aa7.4□□□□□ -1.23
PBRM1-208ENST00000410007 C5orf24Q7Z6I8 188 aa7.4□□□□□ -1.23
PBRM1-208ENST00000410007 KLHL30-AS1Q8NEE0 82 aa7.4□□□□□ -1.23
PBRM1-208ENST00000410007 TSKUQ8WUA8 353 aa7.4□□□□□ -1.23
PBRM1-208ENST00000410007 RNF166Q96A37 237 aaPredicted RBP7.4□□□□□ -1.23
PBRM1-208ENST00000410007 NXT2Q9NPJ8 142 aaKnown RBP7.4□□□□□ -1.23
PBRM1-208ENST00000410007 GAGE10A6NGK3 116 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 IGLV3-9A0A075B6K5 115 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 RNASE2P10153 161 aaKnown RBP7.39□□□□□ -1.23
PBRM1-208ENST00000410007 ZNF329Q86UD4 541 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 DTX2Q86UW9 622 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 ATOH7Q8N100 152 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 IGHV1-69DA0A0B4J2H0 117 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 IGHV1-69P01742 117 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 ZNF688P0C7X2 276 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 CFHR2P36980 270 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 ZNF138P52744 262 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 LYPD1Q8N2G4 141 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 OR13C6PQ8NH95 151 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 PEF1Q9UBV8 284 aaKnown RBP7.39□□□□□ -1.23
PBRM1-208ENST00000410007 KIAA2026Q5HYC2 2103 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 NPIPB5A8MRT5 1133 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 TOMM40O96008 361 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 IGKV1-16P04430 117 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 SOD3P08294 240 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 LCNL1Q6ZST4 164 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 RPP25LQ8N5L8 163 aaKnown RBP7.39□□□□□ -1.23
PBRM1-208ENST00000410007 LINC00477Q96M19 166 aa7.39□□□□□ -1.23
PBRM1-208ENST00000410007 NOTCH4Q99466 2003 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 IGHV2-70DA0A0C4DH43 119 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 LINC01549A6NIU2 74 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 C15orf62A8K5M9 175 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 CFAP161Q6P656 301 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 ATP5L2Q7Z4Y8 100 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 HS3ST6Q96QI5 342 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 AGMATQ9BSE5 352 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 C1QTNF4Q9BXJ3 329 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 VCX2Q9H322 139 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 SEPSECSQ9HD40 501 aaKnown RBP7.38□□□□□ -1.23
PBRM1-208ENST00000410007 KIAA1671Q9BY89 1806 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 J3QLI3 93 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 TCRAP04437 139 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 TDGF1P13385 188 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 SRSF1Q07955 248 aaKnown RBP eCLIP7.38□□□□□ -1.23
PBRM1-208ENST00000410007 ORMDL2Q53FV1 153 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 SPATA31B1PQ5VZV4 182 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 TTC9CQ8N5M4 171 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 CYTL1Q9NRR1 136 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 CYSLTR1Q9Y271 337 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 ANAPC1Q9H1A4 1944 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 DDTP30046 118 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 TEX36Q5VZQ5 186 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 TOMM7Q9P0U1 55 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 IGKV2-40A0A087WW87 121 aaPredicted RBP7.38□□□□□ -1.23
PBRM1-208ENST00000410007 IGKV2D-40P01614 121 aaPredicted RBP7.38□□□□□ -1.23
PBRM1-208ENST00000410007 PPIFP30405 207 aaKnown RBP7.38□□□□□ -1.23
PBRM1-208ENST00000410007 NTF4P34130 210 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 ERVK11-1P61568 191 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 EXOC3-AS1Q8N2X6 119 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 VOPP1Q96AW1 172 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 SLX1AQ9BQ83 275 aa7.38□□□□□ -1.23
PBRM1-208ENST00000410007 DAZ1Q9NQZ3 744 aaKnown RBP7.38□□□□□ -1.23
PBRM1-208ENST00000410007 LRRK1Q38SD2 2015 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 K7ERU9 68 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 KIR3DL3Q8N743 410 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 TMEM170AQ8WVE7 144 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 Q96MF0 132 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 RHPN1-AS1Q9BWJ2 59 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 RFNGQ9Y644 331 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 FANCMQ8IYD8 2048 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 PGPEP1LA6NFU8 196 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 WISP1O95388 367 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 DNAL4O96015 105 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 LOXP28300 417 aaPredicted RBP7.37□□□□□ -1.23
PBRM1-208ENST00000410007 COTL1Q14019 142 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 IGFL2Q6UWQ7 119 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 FAM110DQ8TAY7 271 aaPredicted RBP7.37□□□□□ -1.23
PBRM1-208ENST00000410007 GNB1LQ9BYB4 327 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 PARD6GQ9BYG4 376 aaPredicted RBP7.37□□□□□ -1.23
PBRM1-208ENST00000410007 IGKV1-6A0A0C4DH72 117 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 A0A1B0GW64 132 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 LINC00205P59089 165 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 SRSF4Q08170 494 aaKnown RBP7.37□□□□□ -1.23
PBRM1-208ENST00000410007 LINC00311Q8N616 119 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 SSBP4Q9BWG4 385 aaPredicted RBP7.37□□□□□ -1.23
PBRM1-208ENST00000410007 MPDZO75970 2070 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 SRRM4A7MD48 611 aaKnown RBP7.37□□□□□ -1.23
PBRM1-208ENST00000410007 HBDP02042 147 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 NDPQ00604 133 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 RUSC1-AS1Q66K80 236 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 C3orf56Q8N813 242 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 NUDT10Q8NFP7 164 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 NUDT11Q96G61 164 aa7.37□□□□□ -1.23
PBRM1-208ENST00000410007 A0A0G2JRQ6 117 aa7.36□□□□□ -1.23
PBRM1-208ENST00000410007 A0A1W2PPI3 338 aa7.36□□□□□ -1.23
PBRM1-208ENST00000410007 CNTFRP26992 372 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms