RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 NHLRC2Q8NBF2 726 aa15.82■□□□□ 0.12
USP39-204ENST00000409766 C10orf105Q8TEF2 133 aa15.82■□□□□ 0.12
USP39-204ENST00000409766 KLF12Q9Y4X4 402 aa15.82■□□□□ 0.12
USP39-204ENST00000409766 GNG7O60262 68 aa15.81■□□□□ 0.12
USP39-204ENST00000409766 HIST1H1BP16401 226 aaKnown RBP15.81■□□□□ 0.12
USP39-204ENST00000409766 YPEL3P61236 119 aaPredicted RBP15.81■□□□□ 0.12
USP39-204ENST00000409766 BAGE2Q86Y30 109 aa15.81■□□□□ 0.12
USP39-204ENST00000409766 TMEM183AQ8IXX5 376 aa15.81■□□□□ 0.12
USP39-204ENST00000409766 SHANK2-AS3Q9BTD1 123 aa15.81■□□□□ 0.12
USP39-204ENST00000409766 WI2-2373I1.2A0A1W2PRP0 233 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 XKRY2A2RUG3 117 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 VWC2LB2RUY7 222 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 ZNF843Q8N446 348 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 RNF125Q96EQ8 232 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 HSPB9Q9BQS6 159 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 Q9H3A6 140 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 THYN1Q9P016 225 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 H3BRN7 92 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 H3BTX0 84 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 NDUFS8O00217 210 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 HIST1H1EP10412 219 aaKnown RBP15.8■□□□□ 0.12
USP39-204ENST00000409766 C5orf17Q8NAS9 161 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 TMEM68Q96MH6 324 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 ZNF586Q9NXT0 402 aa15.8■□□□□ 0.12
USP39-204ENST00000409766 NDUFB8O95169 186 aa15.79■□□□□ 0.12
USP39-204ENST00000409766 IL4P05112 153 aa15.79■□□□□ 0.12
USP39-204ENST00000409766 SPOCK3Q9BQ16 436 aa15.79■□□□□ 0.12
USP39-204ENST00000409766 ATG101Q9BSB4 218 aa15.79■□□□□ 0.12
USP39-204ENST00000409766 C21orf62Q9NYP8 219 aa15.79■□□□□ 0.12
USP39-204ENST00000409766 OR8I2Q8N0Y5 310 aa15.78■□□□□ 0.12
USP39-204ENST00000409766 OR2J3O76001 311 aa15.78■□□□□ 0.12
USP39-204ENST00000409766 ATP5J2P56134 94 aa15.78■□□□□ 0.12
USP39-204ENST00000409766 OR10D4PQ8NGN7 298 aa15.78■□□□□ 0.12
USP39-204ENST00000409766 EPG5Q9HCE0 2579 aa15.78■□□□□ 0.12
USP39-204ENST00000409766 MYO18BQ8IUG5 2567 aa15.78■□□□□ 0.12
USP39-204ENST00000409766 UBE2G1P62253 170 aa15.77■□□□□ 0.12
USP39-204ENST00000409766 CLEC2AQ6UVW9 174 aa15.77■□□□□ 0.12
USP39-204ENST00000409766 FAM231DQ6ZW35 169 aa15.77■□□□□ 0.12
USP39-204ENST00000409766 HIST1H2BLQ99880 126 aa15.77■□□□□ 0.12
USP39-204ENST00000409766 SMIM27A0A1W2PRY6 76 aa15.77■□□□□ 0.11
USP39-204ENST00000409766 TCRAP04437 139 aa15.77■□□□□ 0.11
USP39-204ENST00000409766 FABP4P15090 132 aa15.77■□□□□ 0.11
USP39-204ENST00000409766 Q56UQ5 140 aa15.77■□□□□ 0.11
USP39-204ENST00000409766 BPIFA4PQ86YQ2 179 aa15.77■□□□□ 0.11
USP39-204ENST00000409766 SMIM12Q96EX1 92 aa15.77■□□□□ 0.11
USP39-204ENST00000409766 C7orf69Q9H7B7 122 aa15.77■□□□□ 0.11
USP39-204ENST00000409766 NIT2Q9NQR4 276 aa15.77■□□□□ 0.11
USP39-204ENST00000409766 OTORQ9NRC9 128 aa15.77■□□□□ 0.11
USP39-204ENST00000409766 UTP20O75691 2785 aaKnown RBP15.76■□□□□ 0.11
USP39-204ENST00000409766 CBLN1P23435 193 aa15.76■□□□□ 0.11
USP39-204ENST00000409766 USF2Q15853 346 aaPredicted RBP15.76■□□□□ 0.11
USP39-204ENST00000409766 PYY3Q5JQD4 70 aa15.76■□□□□ 0.11
USP39-204ENST00000409766 FAM110DQ8TAY7 271 aaPredicted RBP15.76■□□□□ 0.11
USP39-204ENST00000409766 RPH3ALQ9UNE2 315 aa15.76■□□□□ 0.11
USP39-204ENST00000409766 ZNF705GA8MUZ8 300 aaPredicted RBP15.75■□□□□ 0.11
USP39-204ENST00000409766 IGLC2P0DOY2 106 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 KLK9Q2XQG4 91 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 CRYBG3Q68DQ2 2970 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 FMC1Q96HJ9 113 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 SGK494Q96LW2 274 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 GPR82Q96P67 336 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 SERTAD4Q9NUC0 356 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 FBXL7Q9UJT9 491 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 KLK9Q9UKQ9 250 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 CELSR1Q9NYQ6 3014 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 ZNF462Q96JM2 2506 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 IGHV4-30-2A0A087WSY4 118 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 IGHV1-69DA0A0B4J2H0 117 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 MRPS12O15235 138 aaKnown RBP15.75■□□□□ 0.11
USP39-204ENST00000409766 ATP6V0E1O15342 81 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 IGHV1-69P01742 117 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 IGHV3-23P01764 117 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 FRMD6-AS1P0C7T7 363 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 FCGR2BP31994 310 aaPredicted RBP15.75■□□□□ 0.11
USP39-204ENST00000409766 ADMP35318 185 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 BCL6BQ8N143 479 aaPredicted RBP15.75■□□□□ 0.11
USP39-204ENST00000409766 MBD6Q96DN6 1003 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 MLST8Q9BVC4 326 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 TMUB1Q9BVT8 246 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 RNF24Q9Y225 148 aa15.75■□□□□ 0.11
USP39-204ENST00000409766 SPG11Q96JI7 2443 aa15.74■□□□□ 0.11
USP39-204ENST00000409766 TRBV19A0A075B6N1 114 aa15.74■□□□□ 0.11
USP39-204ENST00000409766 UNQ5815/PRO19632Q6UWF5 114 aa15.74■□□□□ 0.11
USP39-204ENST00000409766 CELSR2Q9HCU4 2923 aa15.74■□□□□ 0.11
USP39-204ENST00000409766 IGHV3OR16-10A0A075B7F0 116 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 OR2T8A6NH00 312 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 LTAP01374 205 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 CTSGP08311 255 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 IER3P46695 156 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 EXOC3-AS1Q8N2X6 119 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 NUDT10Q8NFP7 164 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 OR4F17Q8NGA8 305 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 NUDT11Q96G61 164 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 TXN2Q99757 166 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 ZFHX3Q15911 3703 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 CA1P00915 261 aaPredicted RBP15.73■□□□□ 0.11
USP39-204ENST00000409766 TCL1AP56279 114 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 ECSCRQ19T08 205 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 S100A7AQ86SG5 101 aa15.73■□□□□ 0.11
USP39-204ENST00000409766 C5orf56Q8N8D9 126 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms