RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 SLC35B1P78383 322 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 ZNF506Q5JVG8 444 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 CST9LP1Q5W188 147 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 USMG5Q96IX5 58 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 FAM167A-AS1Q96KT0 104 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 SLC25A39Q9BZJ4 359 aaPredicted RBP9.64□□□□□ -0.87
CHMP3-204ENST00000409727 GAR1Q9NY12 217 aaKnown RBP9.64□□□□□ -0.87
CHMP3-204ENST00000409727 ZNF580Q9UK33 172 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 MTORP42345 2549 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 WI2-2373I1.2A0A1W2PRP0 233 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 RPLP1P05386 114 aaKnown RBP9.64□□□□□ -0.87
CHMP3-204ENST00000409727 ADCYAP1P18509 176 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 ARL3P36405 182 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 TEX38Q6PEX7 206 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 Q6ZSV7 163 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 Q8N2B8 174 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 OR4X2Q8NGF9 303 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 MANBALQ9NQG1 85 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 SERTAD4Q9NUC0 356 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
CHMP3-204ENST00000409727 BAHCC1Q9P281 2608 aa9.63□□□□□ -0.87
CHMP3-204ENST00000409727 A0A0G2JLM5 398 aa9.63□□□□□ -0.87
CHMP3-204ENST00000409727 BRI3O95415 125 aa9.63□□□□□ -0.87
CHMP3-204ENST00000409727 APOC3P02656 99 aa9.63□□□□□ -0.87
CHMP3-204ENST00000409727 FOSL1P15407 271 aa9.63□□□□□ -0.87
CHMP3-204ENST00000409727 UBE2L3P68036 154 aaKnown RBP9.63□□□□□ -0.87
CHMP3-204ENST00000409727 ZNF600Q6ZNG1 722 aa9.63□□□□□ -0.87
CHMP3-204ENST00000409727 PQLC2Q6ZP29 291 aa9.63□□□□□ -0.87
CHMP3-204ENST00000409727 PAXXQ9BUH6 204 aa9.63□□□□□ -0.87
CHMP3-204ENST00000409727 MRPL27Q9P0M9 148 aaKnown RBP9.63□□□□□ -0.87
CHMP3-204ENST00000409727 CLDN34H7C241 214 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 ZNF207O43670 478 aaKnown RBP9.62□□□□□ -0.87
CHMP3-204ENST00000409727 OR2C1O95371 312 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 ATP5G3P48201 142 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 HILS1P60008 231 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 MEF2BQ02080 365 aaPredicted RBP9.62□□□□□ -0.87
CHMP3-204ENST00000409727 TOMM20LQ6UXN7 152 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 CYB561D1Q8N8Q1 229 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 OR4F5Q8NH21 305 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 ZNF414Q96IQ9 312 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 OR4F4Q96R69 305 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 C20orf24Q9BUV8 137 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 SLC35B3Q9H1N7 401 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 OR51M1Q9H341 326 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 YTHDF2Q9Y5A9 579 aaKnown RBP9.62□□□□□ -0.87
CHMP3-204ENST00000409727 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.62□□□□□ -0.87
CHMP3-204ENST00000409727 CYSRT1A8MQ03 144 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 C11orf94C9JXX5 98 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 H3BTX0 84 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 RNASE1P07998 156 aaKnown RBP9.62□□□□□ -0.87
CHMP3-204ENST00000409727 SRP19P09132 144 aaKnown RBP9.62□□□□□ -0.87
CHMP3-204ENST00000409727 CD81P60033 236 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 SRSF2Q01130 221 aaKnown RBP9.62□□□□□ -0.87
CHMP3-204ENST00000409727 HIST2H2BDQ6DRA6 164 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 KLHDC1Q8N7A1 406 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 BLNKQ8WV28 456 aa9.62□□□□□ -0.87
CHMP3-204ENST00000409727 BMPR1BO00238 502 aa9.61□□□□□ -0.87
CHMP3-204ENST00000409727 RELQ04864 619 aaPredicted RBP9.61□□□□□ -0.87
CHMP3-204ENST00000409727 FOXE3Q13461 319 aa9.61□□□□□ -0.87
CHMP3-204ENST00000409727 ZNF343Q6P1L6 599 aa9.61□□□□□ -0.87
CHMP3-204ENST00000409727 SHANK2-AS3Q9BTD1 123 aa9.61□□□□□ -0.87
CHMP3-204ENST00000409727 TMEM167BQ9NRX6 74 aa9.61□□□□□ -0.87
CHMP3-204ENST00000409727 RABAC1Q9UI14 185 aa9.61□□□□□ -0.87
CHMP3-204ENST00000409727 IGHV3-49A0A0A0MS15 119 aa9.6□□□□□ -0.87
CHMP3-204ENST00000409727 H3BRN7 92 aa9.6□□□□□ -0.87
CHMP3-204ENST00000409727 PMS2P11Q13670 270 aa9.6□□□□□ -0.87
CHMP3-204ENST00000409727 FXYD5Q96DB9 178 aa9.6□□□□□ -0.87
CHMP3-204ENST00000409727 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
CHMP3-204ENST00000409727 HIVEP1P15822 2718 aa9.6□□□□□ -0.87
CHMP3-204ENST00000409727 IGHV3OR16-13A0A075B7E8 117 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 IGHV3-74A0A0B4J1X5 117 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 IGHV3-66A0A0C4DH42 116 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 ZNF98A6NK75 572 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 FAM74A7A6NL05 159 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 ELANEP08246 267 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 RPL15P61313 204 aaKnown RBP9.59□□□□□ -0.87
CHMP3-204ENST00000409727 GUCA2BQ16661 112 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 KHDC1LQ5JSQ8 128 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 SOHLH1Q5JUK2 328 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 SEC11CQ9BY50 192 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 SMDT1Q9H4I9 107 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 PEF1Q9UBV8 284 aaKnown RBP9.59□□□□□ -0.87
CHMP3-204ENST00000409727 ZNF320A2RRD8 509 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 TMEM89A2RUT3 159 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 GP9P14770 177 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 ZNF674Q2M3X9 581 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 UNQ9165/PRO28630Q6UXU0 137 aa9.59□□□□□ -0.87
CHMP3-204ENST00000409727 ANK3Q12955 4377 aaKnown RBP9.58□□□□□ -0.88
CHMP3-204ENST00000409727 TAGLN2P37802 199 aaKnown RBP9.58□□□□□ -0.88
CHMP3-204ENST00000409727 C18orf65Q6ZTR6 163 aa9.58□□□□□ -0.88
CHMP3-204ENST00000409727 C11orf44Q8N8P7 122 aa9.58□□□□□ -0.88
CHMP3-204ENST00000409727 STXBP6Q8NFX7 210 aa9.58□□□□□ -0.88
CHMP3-204ENST00000409727 RPUSD4Q96CM3 377 aaKnown RBP9.58□□□□□ -0.88
CHMP3-204ENST00000409727 ATP6V0BQ99437 205 aa9.58□□□□□ -0.88
CHMP3-204ENST00000409727 CLPSL1A2RUU4 121 aa9.57□□□□□ -0.88
CHMP3-204ENST00000409727 H3BQ15 152 aa9.57□□□□□ -0.88
CHMP3-204ENST00000409727 GGCTO75223 188 aaKnown RBP9.57□□□□□ -0.88
CHMP3-204ENST00000409727 SCO1O75880 301 aa9.57□□□□□ -0.88
CHMP3-204ENST00000409727 APOHP02749 345 aaPredicted RBP9.57□□□□□ -0.88
CHMP3-204ENST00000409727 NBEAP1P0C6P0 100 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms