RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 C1orf194Q5T5A4 169 aa8.09□□□□□ -1.11
POLR1A-203ENST00000409681 DOCK10Q96BY6 2186 aa8.09□□□□□ -1.11
POLR1A-203ENST00000409681 CD81P60033 236 aa8.09□□□□□ -1.11
POLR1A-203ENST00000409681 TTC9CQ8N5M4 171 aa8.09□□□□□ -1.11
POLR1A-203ENST00000409681 TMEM101Q96IK0 257 aa8.09□□□□□ -1.11
POLR1A-203ENST00000409681 NRN1Q9NPD7 142 aa8.09□□□□□ -1.11
POLR1A-203ENST00000409681 LINC00205P59089 165 aa8.09□□□□□ -1.11
POLR1A-203ENST00000409681 M0R381 172 aa8.09□□□□□ -1.12
POLR1A-203ENST00000409681 RPL35AP18077 110 aaKnown RBP8.09□□□□□ -1.12
POLR1A-203ENST00000409681 ZNF134P52741 427 aa8.09□□□□□ -1.12
POLR1A-203ENST00000409681 MST1LQ2TV78 715 aa8.09□□□□□ -1.12
POLR1A-203ENST00000409681 Q5BKY6 102 aa8.09□□□□□ -1.12
POLR1A-203ENST00000409681 HSPB8Q9UJY1 196 aa8.09□□□□□ -1.12
POLR1A-203ENST00000409681 SOX21Q9Y651 276 aaPredicted RBP8.09□□□□□ -1.12
POLR1A-203ENST00000409681 CLPSL1A2RUU4 121 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 TMEM262E9PQX1 116 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 FAM3BP58499 235 aaPredicted RBP8.08□□□□□ -1.12
POLR1A-203ENST00000409681 CD300CQ08708 224 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 ACTL10Q5JWF8 245 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 PSG8Q9UQ74 426 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 IGF2RP11717 2491 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.08□□□□□ -1.121e-6■■■■■ 30.4
POLR1A-203ENST00000409681 TRAV34A0A0B4J273 112 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 TRGV4A0A0C4DH28 118 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 NMBP08949 121 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 FABP4P15090 132 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 C9orf66Q5T8R8 295 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 RNF222A6NCQ9 220 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 NDPQ00604 133 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 WFDC11Q8NEX6 87 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 RFNGQ9Y644 331 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 M0R2Z0 102 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 LGALS1P09382 135 aaKnown RBP8.08□□□□□ -1.12
POLR1A-203ENST00000409681 ZFP36P26651 326 aaKnown RBP8.08□□□□□ -1.12
POLR1A-203ENST00000409681 UBE2DNLQ8IWF7 75 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 SIRPDQ9H106 197 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 LIME1Q9H400 295 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 MALRD1Q5VYJ5 2156 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 PYYP10082 97 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 LMO4P61968 165 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 NPBQ8NG41 125 aa8.08□□□□□ -1.12
POLR1A-203ENST00000409681 WNK2Q9Y3S1 2297 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 C15orf62A8K5M9 175 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 PMS2P5A8MQ11 134 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 IGHV4-31P0DP07 118 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 SCRT1Q9BWW7 348 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 CACNG7P62955 275 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 ZNF705AQ6ZN79 300 aaPredicted RBP8.07□□□□□ -1.12
POLR1A-203ENST00000409681 PDZD11Q5EBL8 140 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 TCTEX1D4Q5JR98 221 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 FER1L6-AS1Q8NA97 138 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 FGF23Q9GZV9 251 aaPredicted RBP8.07□□□□□ -1.12
POLR1A-203ENST00000409681 TMEM89A2RUT3 159 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 TNFRSF13BO14836 293 aaPredicted RBP8.07□□□□□ -1.12
POLR1A-203ENST00000409681 FHITP49789 147 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 CCL24O00175 119 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 EIF3GO75821 320 aaKnown RBP eCLIP8.07□□□□□ -1.12
POLR1A-203ENST00000409681 PDE6HQ13956 83 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 SHANK2-AS3Q9BTD1 123 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 MAP1LC3CQ9BXW4 147 aa8.07□□□□□ -1.12
POLR1A-203ENST00000409681 RPP21Q9H633 154 aaKnown RBP8.07□□□□□ -1.12
POLR1A-203ENST00000409681 NUP210LQ5VU65 1888 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 ZNF138P52744 262 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 ZNF415Q09FC8 603 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 PUSL1Q8N0Z8 303 aaKnown RBP8.06□□□□□ -1.12
POLR1A-203ENST00000409681 SFRP2Q96HF1 295 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 PACRGQ96M98 296 aaPredicted RBP8.06□□□□□ -1.12
POLR1A-203ENST00000409681 ZMAT4Q9H898 229 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 BATFQ16520 125 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 TMEM97Q5BJF2 176 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 MGST2Q99735 147 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 PARD6GQ9BYG4 376 aaPredicted RBP8.06□□□□□ -1.12
POLR1A-203ENST00000409681 H0YIZ8 118 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 DEFB131AP59861 70 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 MSMPQ1L6U9 139 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 TRBV9A0A0B4J1U6 114 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 SPATA31B1PQ5VZV4 182 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 RARRES2Q99969 163 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 TMEM191AQ9H0A3 160 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 STAG3L2P0CL84 134 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 STAG3L3P0CL85 134 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 HBBP68871 147 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 CCL20P78556 96 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 MUC21Q5SSG8 566 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 C11orf71Q6IPW1 123 aa8.06□□□□□ -1.12
POLR1A-203ENST00000409681 FCN3O75636 299 aa8.05□□□□□ -1.12
POLR1A-203ENST00000409681 DIAPH2-AS1Q14236 149 aa8.05□□□□□ -1.12
POLR1A-203ENST00000409681 PSG3Q16557 428 aa8.05□□□□□ -1.12
POLR1A-203ENST00000409681 LRP4O75096 1905 aa8.05□□□□□ -1.12
POLR1A-203ENST00000409681 SCO2A0A1W2PP80 73 aa8.05□□□□□ -1.12
POLR1A-203ENST00000409681 PRADC1Q9BSG0 188 aa8.05□□□□□ -1.12
POLR1A-203ENST00000409681 TRBV20OR9-2A0A075B6H5 130 aa8.05□□□□□ -1.12
POLR1A-203ENST00000409681 A0A1B0GUT8 65 aa8.05□□□□□ -1.12
POLR1A-203ENST00000409681 NUDT3O95989 172 aa8.05□□□□□ -1.12
POLR1A-203ENST00000409681 GSX1Q9H4S2 264 aaPredicted RBP8.05□□□□□ -1.12
POLR1A-203ENST00000409681 HIVEP2P31629 2446 aa8.05□□□□□ -1.12
POLR1A-203ENST00000409681 ATP5G3P48201 142 aa8.05□□□□□ -1.12
POLR1A-203ENST00000409681 C2CD4CQ8TF44 421 aa8.05□□□□□ -1.12
POLR1A-203ENST00000409681 MBD3L1Q8WWY6 194 aa8.05□□□□□ -1.12
POLR1A-203ENST00000409681 TOMM20LQ6UXN7 152 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms