RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 Q9H3A6 140 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 NPIPB11E5RHQ5 1161 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 PRRG2O14669 202 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 APOHP02749 345 aaPredicted RBP6.73□□□□□ -1.33
SNX13-201ENST00000409076 IL4P05112 153 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 CX3CL1P78423 397 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 FOXC1Q12948 553 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 SRSF7Q16629 238 aaKnown RBP eCLIP6.73□□□□□ -1.33
SNX13-201ENST00000409076 TMEM200BQ69YZ2 307 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 TMEM108Q6UXF1 575 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 SPACA3Q8IXA5 215 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 TMUB1Q9BVT8 246 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 SLC25A2Q9BXI2 301 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 SLC25A15Q9Y619 301 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 A0A1W2PPI3 338 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 FAM181BA6NEQ2 426 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 ORM1P02763 201 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 PRCDQ00LT1 54 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 AMMECR1LQ6DCA0 310 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 ARL6IP6Q8N6S5 226 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 RASL11BQ9BPW5 248 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 TTTY13Q9BZ97 58 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 GAL3ST2Q9H3Q3 398 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 HIST1H1EP10412 219 aaKnown RBP6.72□□□□□ -1.33
SNX13-201ENST00000409076 PSG1P11464 419 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 ECSCRQ19T08 205 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 UFC1Q9Y3C8 167 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 IZUMO1RA6ND01 250 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 CCL25O15444 150 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 IGLC2P0DOY2 106 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 IGLC3P0DOY3 106 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 TNFRSF1AP19438 455 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 SPATA12Q7Z6I5 190 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 MRPS18CQ9Y3D5 142 aaKnown RBP6.72□□□□□ -1.33
SNX13-201ENST00000409076 MYO18BQ8IUG5 2567 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 A0A1W2PRE2 83 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 TYMSP04818 313 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 TSPOP30536 169 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 GLRXP35754 106 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 CFHR2P36980 270 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 RPL24P83731 157 aaKnown RBP6.72□□□□□ -1.33
SNX13-201ENST00000409076 DNLZQ5SXM8 178 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 MBNL2Q5VZF2 373 aaKnown RBP6.72□□□□□ -1.33
SNX13-201ENST00000409076 BCL6BQ8N143 479 aaPredicted RBP6.72□□□□□ -1.33
SNX13-201ENST00000409076 ZNF738Q8NE65 137 aa6.72□□□□□ -1.33
SNX13-201ENST00000409076 IGKV2-40A0A087WW87 121 aaPredicted RBP6.71□□□□□ -1.33
SNX13-201ENST00000409076 IGKV2D-40P01614 121 aaPredicted RBP6.71□□□□□ -1.33
SNX13-201ENST00000409076 ARMS2P0C7Q2 107 aa6.71□□□□□ -1.33
SNX13-201ENST00000409076 CT45A10P0DMU9 189 aa6.71□□□□□ -1.33
SNX13-201ENST00000409076 HLA-DMBP28068 263 aa6.71□□□□□ -1.33
SNX13-201ENST00000409076 PATE2Q6UY27 113 aa6.71□□□□□ -1.33
SNX13-201ENST00000409076 SEM1Q6ZVN7 128 aa6.71□□□□□ -1.33
SNX13-201ENST00000409076 ALKBH7Q9BT30 221 aaPredicted RBP6.71□□□□□ -1.33
SNX13-201ENST00000409076 KIR2DL5BA0A0G2JN68 375 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 KIR2DL5BA0A0G2JPC4 375 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 TMEM213A2RRL7 107 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 P0C879 139 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 PAX1P15863 534 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 KIR2DL5AQ8N109 375 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 PERPQ96FX8 193 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 TMEM70Q9BUB7 260 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 TMEM14BQ9NUH8 114 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 DKK4Q9UBT3 224 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 HIVEP3Q5T1R4 2406 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 C16orf97H3BN30 126 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 GNG7O60262 68 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 KIR2DS2P43631 304 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 COTL1Q14019 142 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 ZNF329Q86UD4 541 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 C5orf17Q8NAS9 161 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 OR4C13Q8NGP0 309 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 EPDR1Q9UM22 224 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 HIGD1AQ9Y241 93 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 ZNF257Q9Y2Q1 563 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 DCHS2Q6V1P9 2916 aa6.71□□□□□ -1.34
SNX13-201ENST00000409076 M0QZK8 103 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 GOSR1O95249 250 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 FAM106CPP0CH98 169 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 GRNP28799 593 aaKnown RBP6.7□□□□□ -1.34
SNX13-201ENST00000409076 YPEL3P61236 119 aaPredicted RBP6.7□□□□□ -1.34
SNX13-201ENST00000409076 HBBP68871 147 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 FAM106AQ4KMX7 169 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 C8orf49Q96NF6 230 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 GNB1LQ9BYB4 327 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 THYN1Q9P016 225 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 CELSR1Q9NYQ6 3014 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 H0YJW9 148 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 TGFAP01135 160 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 PRRX1P54821 245 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 PRR20EP86478 221 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 PRR20CP86479 221 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 PRR20DP86480 221 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 PRR20BP86481 221 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 PRR20AP86496 221 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 TWIST1Q15672 202 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.7□□□□□ -1.34
SNX13-201ENST00000409076 NPIPB5A8MRT5 1133 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 PRSS1P07477 247 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 C1orf185Q5T7R7 199 aa6.7□□□□□ -1.34
SNX13-201ENST00000409076 TEX43Q6ZNM6 134 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms