RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TMEM189A5PLL7 270 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 FNDC10F2Z333 226 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 H3BMM0 161 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 IL7P13232 177 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 C4BPBP20851 252 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 TAS2R30P59541 319 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 RAP2BP61225 183 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 EWSR1Q01844 656 aaKnown RBP eCLIP6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 OR2F1Q13607 317 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 EBLN2Q6P2I7 272 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 LINC00299Q6ZSB3 139 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 ACOT7LQ6ZUV0 252 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 TMEM144Q7Z5S9 345 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 Q8NAQ8 132 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 OR1B1Q8NGR6 318 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 C2CD4CQ8TF44 421 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 SMIM8Q96KF7 97 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 RPRMQ9NS64 109 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 PSENENQ9NZ42 101 aa6.62□□□□□ -1.35
SNORD88A-201ENST00000408314 IGHV4-28A0A0C4DH34 117 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 LINC00854A0A1B0GVQ3 168 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 SMIM9A6NGZ8 99 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 PRSS46E5RG02 174 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 H3BP45 60 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 SSSCA1O60232 199 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 TSC22D2O75157 780 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 ADAP1O75689 374 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 IL5P05113 134 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 NANOS2P60321 138 aaKnown RBP6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 POLR2GP62487 172 aaKnown RBP eCLIP6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 DLK1P80370 383 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 IAH1Q2TAA2 248 aaPredicted RBP6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 PXDC1Q5TGL8 231 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 LGALS9CQ6DKI2 356 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 OR10P1Q8NGE3 313 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 MITD1Q8WV92 249 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 C16orf92Q96LL3 132 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 LINC00052Q96N35 136 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 CCDC32Q9BV29 185 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 C20orf85Q9H1P6 137 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 SAV1Q9H4B6 383 aaPredicted RBP6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 SLC25A22Q9H936 323 aa6.61□□□□□ -1.35
SNORD88A-201ENST00000408314 TRAV10A0A0B4J240 114 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 ZNF98A6NK75 572 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 L7N2F9 121 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 LYRM1O43325 122 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 SCGB1D2O95969 90 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 AMBPP02760 352 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 GIG44P09565 113 aaPredicted RBP6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 RPL7P18124 248 aaKnown RBP6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 ORM2P19652 201 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 ANXA7P20073 488 aaKnown RBP6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 PVALBP20472 110 aaPredicted RBP6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 PAX9P55771 341 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 VAMP2P63027 116 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 CYP2G1PQ6ZSU1 146 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 ZNF546Q86UE3 836 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 NEU1Q99519 415 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 GGACTQ9BVM4 153 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 NPVFQ9HCQ7 196 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 XCL2Q9UBD3 114 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 HIGD1AQ9Y241 93 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 GOLT1BQ9Y3E0 138 aa6.6□□□□□ -1.35
SNORD88A-201ENST00000408314 IGKV1OR2-108A0A075B7D4 117 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 SOCS3O14543 225 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 DEFB4AO15263 64 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 HYPMO75409 117 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 DUSP14O95147 198 aaKnown RBP6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 BTCP35070 178 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 PSG9Q00887 426 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 MZT2BQ6NZ67 158 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 TEPPQ6URK8 271 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 TMEM14EPQ6UXP3 125 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 ZBTB8BQ8NAP8 495 aaPredicted RBP6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 CSNK1G2-AS1Q8NCQ2 148 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 OR4B1Q8NGF8 309 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 S100ZQ8WXG8 99 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 SDHCQ99643 169 aaPredicted RBP6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 SLC25A32Q9H2D1 315 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 CLEC5AQ9NY25 188 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 GSKIPQ9P0R6 139 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 DOK5Q9P104 306 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 FLVCR2Q9UPI3 526 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 RFNGQ9Y644 331 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 X6R8D5 127 aa6.59□□□□□ -1.35
SNORD88A-201ENST00000408314 H3BRN7 92 aa6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 K7EPK0 472 aa6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 TCRBP04435 133 aa6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 OR5G3P0C626 314 aa6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 LINC00869P0C866 280 aa6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 HLA-DMBP28068 263 aa6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 PLP1P60201 277 aa6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 RAB31Q13636 194 aa6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 ZNF705AQ6ZN79 300 aaPredicted RBP6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 SHANK2-AS3Q9BTD1 123 aa6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 RSG1Q9BU20 258 aa6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 WDR12Q9GZL7 423 aaKnown RBP6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 NUDT15Q9NV35 164 aa6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 BIRC6Q9NR09 4857 aa6.58□□□□□ -1.36
SNORD88A-201ENST00000408314 AGRNO00468 2067 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms