RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TBC1D24Q9ULP9 559 aa13.96□□□□□ -0.17
SMARCB1-204ENST00000407422 ELOA3CA0A087WX78 387 aaPredicted RBP13.95□□□□□ -0.18
SMARCB1-204ENST00000407422 A0A1B0GVG6 124 aa13.95□□□□□ -0.18
SMARCB1-204ENST00000407422 SOCS3O14543 225 aa13.95□□□□□ -0.18
SMARCB1-204ENST00000407422 HLA-DRB4P13762 266 aa13.95□□□□□ -0.18
SMARCB1-204ENST00000407422 GATA2P23769 480 aaPredicted RBP13.95□□□□□ -0.18
SMARCB1-204ENST00000407422 NKX2-1P43699 371 aaPredicted RBP13.95□□□□□ -0.18
SMARCB1-204ENST00000407422 HLA-DRB4X5D2U9 266 aa13.95□□□□□ -0.18
SMARCB1-204ENST00000407422 ACOT7LQ6ZUV0 252 aa13.94□□□□□ -0.18
SMARCB1-204ENST00000407422 OR8I2Q8N0Y5 310 aa13.94□□□□□ -0.18
SMARCB1-204ENST00000407422 COQ8AQ8NI60 647 aa13.94□□□□□ -0.18
SMARCB1-204ENST00000407422 HRH4Q9H3N8 390 aa13.94□□□□□ -0.18
SMARCB1-204ENST00000407422 STRAPQ9Y3F4 350 aaKnown RBP13.94□□□□□ -0.18
SMARCB1-204ENST00000407422 IGKV3-20P01619 116 aa13.93□□□□□ -0.18
SMARCB1-204ENST00000407422 IL7P13232 177 aa13.93□□□□□ -0.18
SMARCB1-204ENST00000407422 NUTF2P61970 127 aaKnown RBP13.93□□□□□ -0.18
SMARCB1-204ENST00000407422 C4orf46Q504U0 113 aa13.93□□□□□ -0.18
SMARCB1-204ENST00000407422 RPP25LQ8N5L8 163 aaKnown RBP13.93□□□□□ -0.18
SMARCB1-204ENST00000407422 OR4D5Q8NGN0 318 aa13.93□□□□□ -0.18
SMARCB1-204ENST00000407422 DNAH10Q8IVF4 4471 aa13.93□□□□□ -0.18
SMARCB1-204ENST00000407422 ATP6V1G1O75348 118 aa13.93□□□□□ -0.18
SMARCB1-204ENST00000407422 HLA-DMBP28068 263 aa13.93□□□□□ -0.18
SMARCB1-204ENST00000407422 AKR1C1Q04828 323 aa13.93□□□□□ -0.18
SMARCB1-204ENST00000407422 C2CD4CQ8TF44 421 aa13.93□□□□□ -0.18
SMARCB1-204ENST00000407422 CENPXA8MT69 81 aa13.92□□□□□ -0.18
SMARCB1-204ENST00000407422 SSSCA1O60232 199 aa13.92□□□□□ -0.18
SMARCB1-204ENST00000407422 DEDDO75618 318 aa13.92□□□□□ -0.18
SMARCB1-204ENST00000407422 ORM2P19652 201 aa13.92□□□□□ -0.18
SMARCB1-204ENST00000407422 ID1P41134 155 aa13.92□□□□□ -0.18
SMARCB1-204ENST00000407422 PSMB3P49720 205 aa13.92□□□□□ -0.18
SMARCB1-204ENST00000407422 FXYD7P58549 80 aa13.92□□□□□ -0.18
SMARCB1-204ENST00000407422 C17orf77Q96MU5 243 aa13.92□□□□□ -0.18
SMARCB1-204ENST00000407422 C1QTNF4Q9BXJ3 329 aa13.92□□□□□ -0.18
SMARCB1-204ENST00000407422 SLC25A32Q9H2D1 315 aa13.92□□□□□ -0.18
SMARCB1-204ENST00000407422 SAV1Q9H4B6 383 aaPredicted RBP13.92□□□□□ -0.18
SMARCB1-204ENST00000407422 SLC25A22Q9H936 323 aa13.92□□□□□ -0.18
SMARCB1-204ENST00000407422 PSENENQ9NZ42 101 aa13.92□□□□□ -0.18
SMARCB1-204ENST00000407422 CFDP00746 253 aaPredicted RBP13.91□□□□□ -0.18
SMARCB1-204ENST00000407422 IFNA21P01568 189 aa13.91□□□□□ -0.18
SMARCB1-204ENST00000407422 LGALS9CQ6DKI2 356 aa13.91□□□□□ -0.18
SMARCB1-204ENST00000407422 Q6ZTC4 211 aa13.91□□□□□ -0.18
SMARCB1-204ENST00000407422 BPIFCQ8NFQ6 507 aa13.91□□□□□ -0.18
SMARCB1-204ENST00000407422 CELA1Q9UNI1 258 aa13.91□□□□□ -0.18
SMARCB1-204ENST00000407422 DNAH6Q9C0G6 4158 aa13.91□□□□□ -0.18
SMARCB1-204ENST00000407422 ZNF98A6NK75 572 aa13.9□□□□□ -0.18
SMARCB1-204ENST00000407422 PMS2P5A8MQ11 134 aa13.9□□□□□ -0.18
SMARCB1-204ENST00000407422 F6UB75 175 aa13.9□□□□□ -0.18
SMARCB1-204ENST00000407422 CCNKO75909 580 aa13.9□□□□□ -0.18
SMARCB1-204ENST00000407422 PAX9P55771 341 aa13.9□□□□□ -0.18
SMARCB1-204ENST00000407422 FOXI2Q6ZQN5 318 aa13.9□□□□□ -0.18
SMARCB1-204ENST00000407422 TMEM144Q7Z5S9 345 aa13.9□□□□□ -0.18
SMARCB1-204ENST00000407422 C7orf50Q9BRJ6 194 aaKnown RBP13.9□□□□□ -0.18
SMARCB1-204ENST00000407422 SMCO3A2RU48 225 aa13.9□□□□□ -0.19
SMARCB1-204ENST00000407422 IGLL5B9A064 214 aa13.9□□□□□ -0.19
SMARCB1-204ENST00000407422 ISLRO14498 428 aa13.9□□□□□ -0.19
SMARCB1-204ENST00000407422 PLA2G10O15496 165 aa13.9□□□□□ -0.19
SMARCB1-204ENST00000407422 OR1B1Q8NGR6 318 aa13.9□□□□□ -0.19
SMARCB1-204ENST00000407422 SMIM8Q96KF7 97 aa13.9□□□□□ -0.19
SMARCB1-204ENST00000407422 C20orf173Q96LM9 149 aa13.9□□□□□ -0.19
SMARCB1-204ENST00000407422 RSG1Q9BU20 258 aa13.9□□□□□ -0.19
SMARCB1-204ENST00000407422 SLC45A2Q9UMX9 530 aa13.9□□□□□ -0.19
SMARCB1-204ENST00000407422 SCGB1D2O95969 90 aa13.89□□□□□ -0.19
SMARCB1-204ENST00000407422 IAH1Q2TAA2 248 aaPredicted RBP13.89□□□□□ -0.19
SMARCB1-204ENST00000407422 ZNF709Q8N972 641 aa13.89□□□□□ -0.19
SMARCB1-204ENST00000407422 ZBTB8BQ8NAP8 495 aaPredicted RBP13.89□□□□□ -0.19
SMARCB1-204ENST00000407422 OR4B1Q8NGF8 309 aa13.89□□□□□ -0.19
SMARCB1-204ENST00000407422 NDUFA13Q9P0J0 144 aa13.89□□□□□ -0.19
SMARCB1-204ENST00000407422 C11orf94C9JXX5 98 aa13.88□□□□□ -0.19
SMARCB1-204ENST00000407422 GALR1P47211 349 aa13.88□□□□□ -0.19
SMARCB1-204ENST00000407422 CNPY1Q3B7I2 92 aa13.88□□□□□ -0.19
SMARCB1-204ENST00000407422 ZNF705AQ6ZN79 300 aaPredicted RBP13.88□□□□□ -0.19
SMARCB1-204ENST00000407422 ZNF767PQ75MW2 155 aa13.88□□□□□ -0.19
SMARCB1-204ENST00000407422 MITD1Q8WV92 249 aa13.88□□□□□ -0.19
SMARCB1-204ENST00000407422 C16orf92Q96LL3 132 aa13.88□□□□□ -0.19
SMARCB1-204ENST00000407422 TMEM147Q9BVK8 224 aa13.88□□□□□ -0.19
SMARCB1-204ENST00000407422 DOK5Q9P104 306 aa13.88□□□□□ -0.19
SMARCB1-204ENST00000407422 APLNQ9ULZ1 77 aa13.88□□□□□ -0.19
SMARCB1-204ENST00000407422 METTL15P1P0C7V9 234 aa13.87□□□□□ -0.19
SMARCB1-204ENST00000407422 RRAS2P62070 204 aaPredicted RBP13.87□□□□□ -0.19
SMARCB1-204ENST00000407422 PRR20EP86478 221 aa13.87□□□□□ -0.19
SMARCB1-204ENST00000407422 PRR20CP86479 221 aa13.87□□□□□ -0.19
SMARCB1-204ENST00000407422 PRR20DP86480 221 aa13.87□□□□□ -0.19
SMARCB1-204ENST00000407422 PRR20BP86481 221 aa13.87□□□□□ -0.19
SMARCB1-204ENST00000407422 PRR20AP86496 221 aa13.87□□□□□ -0.19
SMARCB1-204ENST00000407422 TMEM14EPQ6UXP3 125 aa13.87□□□□□ -0.19
SMARCB1-204ENST00000407422 CYP2G1PQ6ZSU1 146 aa13.87□□□□□ -0.19
SMARCB1-204ENST00000407422 SCRT1Q9BWW7 348 aa13.87□□□□□ -0.19
SMARCB1-204ENST00000407422 SLC35B3Q9H1N7 401 aa13.87□□□□□ -0.19
SMARCB1-204ENST00000407422 C20orf85Q9H1P6 137 aa13.87□□□□□ -0.19
SMARCB1-204ENST00000407422 GSKIPQ9P0R6 139 aa13.87□□□□□ -0.19
SMARCB1-204ENST00000407422 IL5P05113 134 aa13.86□□□□□ -0.19
SMARCB1-204ENST00000407422 C12orf74Q32Q52 190 aa13.86□□□□□ -0.19
SMARCB1-204ENST00000407422 FAM78BQ5VT40 261 aa13.86□□□□□ -0.19
SMARCB1-204ENST00000407422 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.86□□□□□ -0.19
SMARCB1-204ENST00000407422 RCL1Q9Y2P8 373 aaKnown RBP13.86□□□□□ -0.19
SMARCB1-204ENST00000407422 IGHV3OR16-12A0A075B7B8 117 aa13.86□□□□□ -0.19
SMARCB1-204ENST00000407422 A0A0J9YX75 114 aa13.86□□□□□ -0.19
SMARCB1-204ENST00000407422 ZNF705FA8MVS1 300 aaPredicted RBP13.86□□□□□ -0.19
SMARCB1-204ENST00000407422 LYRM1O43325 122 aa13.86□□□□□ -0.19
SMARCB1-204ENST00000407422 ZNF705DP0CH99 300 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms