RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 PATE2Q6UY27 113 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 ZNF600Q6ZNG1 722 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 SLC51BQ86UW2 128 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 NDUFA11Q86Y39 141 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 BAP18Q8IXM2 172 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 STPG3Q8N7X2 389 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 ZNF709Q8N972 641 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 OR1B1Q8NGR6 318 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 MRAPQ8TCY5 172 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 TMED6Q8WW62 240 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 DLX4Q92988 240 aaPredicted RBP6.38□□□□□ -1.39
GPC3-203ENST00000406757 ARV1Q9H2C2 271 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 SLC39A9Q9NUM3 307 aa6.38□□□□□ -1.39
GPC3-203ENST00000406757 RYR3Q15413 4870 aa6.37□□□□□ -1.39
GPC3-203ENST00000406757 TRAV5A0A0B4J249 113 aa6.37□□□□□ -1.39
GPC3-203ENST00000406757 WI2-2373I1.2A0A1W2PRP0 233 aa6.37□□□□□ -1.39
GPC3-203ENST00000406757 C17orf112F2Z3M2 114 aa6.37□□□□□ -1.39
GPC3-203ENST00000406757 APOHP02749 345 aaPredicted RBP6.37□□□□□ -1.39
GPC3-203ENST00000406757 OR5G3P0C626 314 aa6.37□□□□□ -1.39
GPC3-203ENST00000406757 TPT1P13693 172 aaKnown RBP6.37□□□□□ -1.39
GPC3-203ENST00000406757 RPL29P47914 159 aaKnown RBP6.37□□□□□ -1.39
GPC3-203ENST00000406757 RAB2AP61019 212 aa6.37□□□□□ -1.39
GPC3-203ENST00000406757 USF2Q15853 346 aaPredicted RBP6.37□□□□□ -1.39
GPC3-203ENST00000406757 TM4SF20Q53R12 229 aa6.37□□□□□ -1.39
GPC3-203ENST00000406757 FAM74A1Q5RGS3 127 aa6.37□□□□□ -1.39
GPC3-203ENST00000406757 SPATA31B1PQ5VZV4 182 aa6.37□□□□□ -1.39
GPC3-203ENST00000406757 SPSB3Q6PJ21 355 aa6.37□□□□□ -1.39
GPC3-203ENST00000406757 ALKAL2Q6UX46 152 aa6.37□□□□□ -1.39
GPC3-203ENST00000406757 REC114Q7Z4M0 266 aa6.37□□□□□ -1.39
GPC3-203ENST00000406757 PCNPQ8WW12 178 aaKnown RBP6.37□□□□□ -1.39
GPC3-203ENST00000406757 UHRF2Q96PU4 802 aa6.37□□□□□ -1.39
GPC3-203ENST00000406757 PARD6GQ9BYG4 376 aaPredicted RBP6.37□□□□□ -1.39
GPC3-203ENST00000406757 GAR1Q9NY12 217 aaKnown RBP6.37□□□□□ -1.39
GPC3-203ENST00000406757 NDUFA4O00483 81 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 HMGB3O15347 200 aaKnown RBP6.36□□□□□ -1.39
GPC3-203ENST00000406757 MPDU1O75352 247 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 SCGB2A1O75556 95 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 SNRPCP09234 159 aaKnown RBP6.36□□□□□ -1.39
GPC3-203ENST00000406757 SPP1P10451 314 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 C4BPBP20851 252 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 FHITP49789 147 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 RELQ04864 619 aaPredicted RBP6.36□□□□□ -1.39
GPC3-203ENST00000406757 KLF5Q13887 457 aaPredicted RBP6.36□□□□□ -1.39
GPC3-203ENST00000406757 FAM106AQ4KMX7 169 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 FAM209BQ5JX69 171 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 MORN5Q5VZ52 161 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 LEMD1Q68G75 181 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 FAM122CQ6P4D5 195 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 GPHB5Q86YW7 130 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 STOML3Q8TAV4 291 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 TMEM37Q8WXS4 190 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 RNF125Q96EQ8 232 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 AURKAIP1Q9NWT8 199 aaPredicted RBP6.36□□□□□ -1.39
GPC3-203ENST00000406757 TIMM9Q9Y5J7 89 aa6.36□□□□□ -1.39
GPC3-203ENST00000406757 DNAH9Q9NYC9 4486 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 A0A1B0GV50 99 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 COX7A2P2O60397 106 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 HYPMO75409 117 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 PF4P02776 101 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 FABP1P07148 127 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 ZP3P21754 424 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 MYCNOSP40205 109 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 SELENOTP62341 195 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 EIF5AP63241 154 aaKnown RBP6.35□□□□□ -1.39
GPC3-203ENST00000406757 IFITM2Q01629 132 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 C10orf113Q5VZT2 155 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 Q6ZRG5 221 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 MIR17HGQ75NE6 70 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 SSX7Q7RTT5 188 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 OR10G4Q8NGN3 311 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 OR10G9Q8NGN4 311 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 OR10G7Q8NGN6 311 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 TMEM190Q8WZ59 177 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 GNPNAT1Q96EK6 184 aaPredicted RBP6.35□□□□□ -1.39
GPC3-203ENST00000406757 ATP6V0BQ99437 205 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 PSMG3Q9BT73 122 aaPredicted RBP6.35□□□□□ -1.39
GPC3-203ENST00000406757 DNAJC4Q9NNZ3 241 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 RPRMQ9NS64 109 aa6.35□□□□□ -1.39
GPC3-203ENST00000406757 MRPL27Q9P0M9 148 aaKnown RBP6.35□□□□□ -1.39
GPC3-203ENST00000406757 SEC11BP0C7V7 166 aa6.34□□□□□ -1.39
GPC3-203ENST00000406757 FHL3Q13643 280 aa6.34□□□□□ -1.39
GPC3-203ENST00000406757 ACOT6Q3I5F7 207 aaPredicted RBP6.34□□□□□ -1.39
GPC3-203ENST00000406757 AKR1C8PQ5T2L2 129 aa6.34□□□□□ -1.39
GPC3-203ENST00000406757 FAM78BQ5VT40 261 aa6.34□□□□□ -1.39
GPC3-203ENST00000406757 ADAMTSL5Q6ZMM2 481 aa6.34□□□□□ -1.39
GPC3-203ENST00000406757 LINC00305Q7Z4B0 112 aa6.34□□□□□ -1.39
GPC3-203ENST00000406757 FAM213BQ8TBF2 198 aa6.34□□□□□ -1.39
GPC3-203ENST00000406757 SCRT1Q9BWW7 348 aa6.34□□□□□ -1.39
GPC3-203ENST00000406757 KRTAP9-9Q9BYP9 154 aa6.34□□□□□ -1.39
GPC3-203ENST00000406757 KRTAP9-4Q9BYQ2 154 aa6.34□□□□□ -1.39
GPC3-203ENST00000406757 SLC25A22Q9H936 323 aa6.34□□□□□ -1.39
GPC3-203ENST00000406757 SEPSECSQ9HD40 501 aaKnown RBP6.34□□□□□ -1.39
GPC3-203ENST00000406757 RABAC1Q9UI14 185 aa6.34□□□□□ -1.39
GPC3-203ENST00000406757 HIGD1AQ9Y241 93 aa6.34□□□□□ -1.39
GPC3-203ENST00000406757 IGKV3-7A0A075B6H7 116 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 TMEM213A2RRL7 107 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 C2orf70A6NJV1 201 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 H3BTX0 84 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 OVOL1O14753 267 aa6.33□□□□□ -1.4
GPC3-203ENST00000406757 CSN3P07498 182 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms