RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 HIST1H1EP10412 219 aaKnown RBP19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 HIST1H2BOP23527 126 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 HIST1H2BBP33778 126 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 HIST1H2BDP58876 126 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 HIST1H2BCP62807 126 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 HIST2H2BEQ16778 126 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 FRZBQ92765 325 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 HIST1H2BHQ93079 126 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 LINC00479Q96M42 142 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 TXN2Q99757 166 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 HIST1H2BNQ99877 126 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 HIST1H2BMQ99879 126 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 HIF1ANQ9NWT6 349 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 SH2D7A6NKC9 451 aaPredicted RBP19.33■□□□□ 0.68
DNMT3A-206ENST00000406659 VN1R17PQ8TDU5 208 aa19.33■□□□□ 0.68
DNMT3A-206ENST00000406659 H3BTX0 84 aa19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 GCGP01275 180 aa19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 TYMSP04818 313 aa19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 TRGC1P0CF51 173 aa19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 MGST1P10620 155 aaKnown RBP19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 GNG5P63218 68 aa19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 PIFOQ8TCI5 191 aa19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 Q9H3A6 140 aa19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 IL36BQ9NZH7 164 aa19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 TRAV20A0A0B4J274 112 aa19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 OR2T8A6NH00 312 aa19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 SLC17A3O00476 420 aa19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 IGLV2-8P01709 118 aa19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 BPIFA4PQ86YQ2 179 aa19.32■□□□□ 0.68
DNMT3A-206ENST00000406659 UTP20O75691 2785 aaKnown RBP19.31■□□□□ 0.68
DNMT3A-206ENST00000406659 TRAV34A0A0B4J273 112 aa19.31■□□□□ 0.68
DNMT3A-206ENST00000406659 ZNF320A2RRD8 509 aa19.31■□□□□ 0.68
DNMT3A-206ENST00000406659 LINC01548A6NM66 108 aa19.31■□□□□ 0.68
DNMT3A-206ENST00000406659 FCGR2BP31994 310 aaPredicted RBP19.31■□□□□ 0.68
DNMT3A-206ENST00000406659 C5orf17Q8NAS9 161 aa19.31■□□□□ 0.68
DNMT3A-206ENST00000406659 OSTCQ9NRP0 149 aa19.31■□□□□ 0.68
DNMT3A-206ENST00000406659 ZNF586Q9NXT0 402 aa19.31■□□□□ 0.68
DNMT3A-206ENST00000406659 RNF24Q9Y225 148 aa19.31■□□□□ 0.68
DNMT3A-206ENST00000406659 PHOX2AO14813 284 aa19.3■□□□□ 0.68
DNMT3A-206ENST00000406659 KLK9Q2XQG4 91 aa19.3■□□□□ 0.68
DNMT3A-206ENST00000406659 BAGE2Q86Y30 109 aa19.3■□□□□ 0.68
DNMT3A-206ENST00000406659 OR4F17Q8NGA8 305 aa19.3■□□□□ 0.68
DNMT3A-206ENST00000406659 KLK9Q9UKQ9 250 aa19.3■□□□□ 0.68
DNMT3A-206ENST00000406659 RPH3ALQ9UNE2 315 aa19.3■□□□□ 0.68
DNMT3A-206ENST00000406659 UBR5O95071 2799 aaPredicted RBP19.3■□□□□ 0.68
DNMT3A-206ENST00000406659 GATA3P23771 443 aa19.29■□□□□ 0.68
DNMT3A-206ENST00000406659 UBE2G1P62253 170 aa19.29■□□□□ 0.68
DNMT3A-206ENST00000406659 RHOGP84095 191 aa19.29■□□□□ 0.68
DNMT3A-206ENST00000406659 OTORQ9NRC9 128 aa19.29■□□□□ 0.68
DNMT3A-206ENST00000406659 G3V318 75 aa19.29■□□□□ 0.68
DNMT3A-206ENST00000406659 ISLRO14498 428 aa19.29■□□□□ 0.68
DNMT3A-206ENST00000406659 USF2Q15853 346 aaPredicted RBP19.29■□□□□ 0.68
DNMT3A-206ENST00000406659 TMEM183BQ1AE95 376 aa19.29■□□□□ 0.68
DNMT3A-206ENST00000406659 RPEL1Q2QD12 228 aa19.29■□□□□ 0.68
DNMT3A-206ENST00000406659 C15orf32Q32M92 178 aa19.29■□□□□ 0.68
DNMT3A-206ENST00000406659 LINC00518Q8N0U6 118 aa19.29■□□□□ 0.68
DNMT3A-206ENST00000406659 V9GYV3 84 aa19.29■□□□□ 0.68
DNMT3A-206ENST00000406659 CTSGP08311 255 aa19.28■□□□□ 0.68
DNMT3A-206ENST00000406659 HOXA5P20719 270 aa19.28■□□□□ 0.68
DNMT3A-206ENST00000406659 ATG101Q9BSB4 218 aa19.28■□□□□ 0.68
DNMT3A-206ENST00000406659 RNASE7Q9H1E1 156 aaKnown RBP19.28■□□□□ 0.68
DNMT3A-206ENST00000406659 TRAV9-1A0A075B6T8 112 aa19.27■□□□□ 0.68
DNMT3A-206ENST00000406659 ZNF98A6NK75 572 aa19.27■□□□□ 0.68
DNMT3A-206ENST00000406659 S100A9P06702 114 aaKnown RBP19.27■□□□□ 0.68
DNMT3A-206ENST00000406659 LINC01356Q8N9X3 169 aa19.27■□□□□ 0.68
DNMT3A-206ENST00000406659 NHLRC2Q8NBF2 726 aa19.27■□□□□ 0.68
DNMT3A-206ENST00000406659 SOX21Q9Y651 276 aaPredicted RBP19.27■□□□□ 0.68
DNMT3A-206ENST00000406659 FAM208BQ5VWN6 2430 aa19.27■□□□□ 0.68
DNMT3A-206ENST00000406659 TRBV9A0A0B4J1U6 114 aa19.27■□□□□ 0.67
DNMT3A-206ENST00000406659 ZNF502Q8TBZ5 544 aa19.27■□□□□ 0.67
DNMT3A-206ENST00000406659 KLF12Q9Y4X4 402 aa19.27■□□□□ 0.67
DNMT3A-206ENST00000406659 IBA57Q5T440 356 aaKnown RBP19.26■□□□□ 0.67
DNMT3A-206ENST00000406659 CHRDL1Q9BU40 450 aa19.26■□□□□ 0.67
DNMT3A-206ENST00000406659 TRBV19A0A075B6N1 114 aa19.25■□□□□ 0.67
DNMT3A-206ENST00000406659 AMY1AP04745 511 aa19.25■□□□□ 0.67
DNMT3A-206ENST00000406659 LY6EQ16553 131 aa19.25■□□□□ 0.67
DNMT3A-206ENST00000406659 C9orf152Q5JTZ5 239 aa19.25■□□□□ 0.67
DNMT3A-206ENST00000406659 H3BUX3 64 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 TCRAP04437 139 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 ACTL10Q5JWF8 245 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 BCL6BQ8N143 479 aaPredicted RBP19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 CMTM2Q8TAZ6 248 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 TMEM190Q8WZ59 177 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 FMC1Q96HJ9 113 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 SERTAD4Q9NUC0 356 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 GAR1Q9NY12 217 aaKnown RBP19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 EPG5Q9HCE0 2579 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 TRAV41A0A0B4J266 112 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 AVPP01185 164 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 IGLC2P0DOY2 106 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 GPR183P32249 361 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 ADMP35318 185 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 MS4A10Q96PG2 267 aa19.24■□□□□ 0.67
DNMT3A-206ENST00000406659 A6NDX4 124 aa19.23■□□□□ 0.67
DNMT3A-206ENST00000406659 S100A8P05109 93 aa19.23■□□□□ 0.67
DNMT3A-206ENST00000406659 COL8A1P27658 744 aa19.23■□□□□ 0.67
DNMT3A-206ENST00000406659 EXOC3-AS1Q8N2X6 119 aa19.23■□□□□ 0.67
DNMT3A-206ENST00000406659 EEF1AKMT3Q96AZ1 226 aa19.23■□□□□ 0.67
DNMT3A-206ENST00000406659 A0A096LNT2 108 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms