RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ZNF705AQ6ZN79 300 aaPredicted RBP7.82□□□□□ -1.16
MSH2-202ENST00000406134 VPS25Q9BRG1 176 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 ALKBH7Q9BT30 221 aaPredicted RBP7.82□□□□□ -1.16
MSH2-202ENST00000406134 TNFRSF19Q9NS68 423 aa7.82□□□□□ -1.16
MSH2-202ENST00000406134 IGHV1-69-2A0A0G2JMI3 117 aa7.81□□□□□ -1.16
MSH2-202ENST00000406134 ZNF705FA8MVS1 300 aaPredicted RBP7.81□□□□□ -1.16
MSH2-202ENST00000406134 NPIPB6E9PJ23 425 aa7.81□□□□□ -1.16
MSH2-202ENST00000406134 IGLC1P0CG04 106 aa7.81□□□□□ -1.16
MSH2-202ENST00000406134 ZNF705DP0CH99 300 aaPredicted RBP7.81□□□□□ -1.16
MSH2-202ENST00000406134 ZNF705BP0CI00 300 aaPredicted RBP7.81□□□□□ -1.16
MSH2-202ENST00000406134 CD24P25063 80 aa7.81□□□□□ -1.16
MSH2-202ENST00000406134 HIGD1CA8MV81 97 aa7.81□□□□□ -1.16
MSH2-202ENST00000406134 HSBP1L1C9JCN9 74 aa7.81□□□□□ -1.16
MSH2-202ENST00000406134 H3BTX0 84 aa7.81□□□□□ -1.16
MSH2-202ENST00000406134 PRRG2O14669 202 aa7.81□□□□□ -1.16
MSH2-202ENST00000406134 APCSP02743 223 aa7.81□□□□□ -1.16
MSH2-202ENST00000406134 GPR6P46095 362 aaPredicted RBP7.81□□□□□ -1.16
MSH2-202ENST00000406134 EBLN2Q6P2I7 272 aa7.81□□□□□ -1.16
MSH2-202ENST00000406134 ASCL5Q7RTU5 278 aa7.81□□□□□ -1.16
MSH2-202ENST00000406134 ZNF414Q96IQ9 312 aa7.81□□□□□ -1.16
MSH2-202ENST00000406134 ZNF586Q9NXT0 402 aa7.81□□□□□ -1.16
MSH2-202ENST00000406134 F11RQ9Y624 299 aaKnown RBP7.81□□□□□ -1.16
MSH2-202ENST00000406134 TNXAQ16473 311 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 OR1B1Q8NGR6 318 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 PSMG3-AS1Q96PY0 264 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 MRPL27Q9P0M9 148 aaKnown RBP7.8□□□□□ -1.16
MSH2-202ENST00000406134 C2orf70A6NJV1 201 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 MRPS12O15235 138 aaKnown RBP7.8□□□□□ -1.16
MSH2-202ENST00000406134 ORM2P19652 201 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 MC5RP33032 325 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 LGALS7P47929 136 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 BCL6BQ8N143 479 aaPredicted RBP7.8□□□□□ -1.16
MSH2-202ENST00000406134 BLNKQ8WV28 456 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 ZNF253O75346 499 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 TOMM40O96008 361 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 VMA21Q3ZAQ7 101 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 GFRALQ6UXV0 394 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 TCF24Q7RTU0 167 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 SMIM15Q7Z3B0 74 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 S100A7AQ86SG5 101 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 C8orf46Q8TAG6 207 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 SERTAD4Q9NUC0 356 aa7.8□□□□□ -1.16
MSH2-202ENST00000406134 IGKV1-17P01599 117 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 PMCHP20382 165 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 GAGE1Q13065 139 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 MRPL52Q86TS9 123 aaKnown RBP7.79□□□□□ -1.16
MSH2-202ENST00000406134 SMIM12Q96EX1 92 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 ITPR1Q14643 2758 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.79□□□□□ -1.16
MSH2-202ENST00000406134 RPL27AP46776 148 aaKnown RBP7.79□□□□□ -1.16
MSH2-202ENST00000406134 AMTP48728 403 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 PRRX1P54821 245 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 COX19Q49B96 90 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 CFHR4Q92496 578 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 TRAV8-1A0A0A6YYK1 113 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 PGPA6NDG6 321 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 DIRC3C9JPN6 131 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 K7EIM0 57 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 TCRAP04437 139 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 NBEAP1P0C6P0 100 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 PSG1P11464 419 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 NBL1P41271 181 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 KRTDAPP60985 99 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 LCN12Q6JVE5 192 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 PRR27Q6MZM9 219 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 PPP1R27Q86WC6 154 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 SIGLECL1Q8N7X8 197 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 LY6G5BQ8NDX9 201 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 TNFRSF14Q92956 283 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 PERPQ96FX8 193 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 C17orf77Q96MU5 243 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 CLEC7AQ9BXN2 247 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 SAMD10Q9BYL1 202 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 Q9H3A6 140 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 RNF24Q9Y225 148 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 CEP295Q9C0D2 2601 aa7.79□□□□□ -1.16
MSH2-202ENST00000406134 F8W735 103 aaPredicted RBP7.78□□□□□ -1.16
MSH2-202ENST00000406134 SUB1P53999 127 aaKnown RBP eCLIP7.78□□□□□ -1.162e-9■■■■■ 27.7
MSH2-202ENST00000406134 CSMD2Q7Z408 3487 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 TLN1Q9Y490 2541 aaKnown RBP7.78□□□□□ -1.16
MSH2-202ENST00000406134 ENSAO43768 121 aaKnown RBP7.78□□□□□ -1.16
MSH2-202ENST00000406134 HYPMO75409 117 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 PRB4P10163 310 aaPredicted RBP7.78□□□□□ -1.16
MSH2-202ENST00000406134 APOBEC3AP31941 199 aaPredicted RBP7.78□□□□□ -1.16
MSH2-202ENST00000406134 MMDQ15546 238 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 Q86TA4 180 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 ZNF575Q86XF7 245 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 GPR82Q96P67 336 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 VAMP8Q9BV40 100 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 FBXL15Q9H469 300 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 ZNF492Q9P255 531 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 SPTBN1Q01082 2364 aaKnown RBP7.78□□□□□ -1.16
MSH2-202ENST00000406134 MUC6Q6W4X9 2439 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 SH2D7A6NKC9 451 aaPredicted RBP7.78□□□□□ -1.16
MSH2-202ENST00000406134 M0QZ24 198 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 IGLC2P0DOY2 106 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 IGLC3P0DOY3 106 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 PTTG1IPP53801 180 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 OR8B3Q8NGG8 313 aa7.78□□□□□ -1.16
MSH2-202ENST00000406134 OR8B2Q96RD0 313 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms