RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 GATA4P43694 442 aa12.13□□□□□ -0.47
ATG4B-206ENST00000405546 GSX1Q9H4S2 264 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-206ENST00000405546 SSUH2Q9Y2M2 353 aa12.13□□□□□ -0.47
ATG4B-206ENST00000405546 VWC2LB2RUY7 222 aa12.13□□□□□ -0.47
ATG4B-206ENST00000405546 COX7A1P24310 79 aa12.13□□□□□ -0.47
ATG4B-206ENST00000405546 PGLYRP4Q96LB8 373 aa12.13□□□□□ -0.47
ATG4B-206ENST00000405546 IZUMO1RA6ND01 250 aa12.13□□□□□ -0.47
ATG4B-206ENST00000405546 TMPRSS3P57727 454 aa12.13□□□□□ -0.47
ATG4B-206ENST00000405546 SSBP2P81877 361 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-206ENST00000405546 IGFL3Q6UXB1 125 aa12.13□□□□□ -0.47
ATG4B-206ENST00000405546 LRBAP50851 2863 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 HSBP1L1C9JCN9 74 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 ISLRO14498 428 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 LEPROTL1O95214 131 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 PLGLAQ15195 96 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 MOSP00540 346 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 URB1-AS1Q96HZ7 61 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 TXNDC17Q9BRA2 123 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 OSTCQ9NRP0 149 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 NCOR2Q9Y618 2525 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 GAGE10A6NGK3 116 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 RNASE2P10153 161 aaKnown RBP12.12□□□□□ -0.47
ATG4B-206ENST00000405546 OR4C13Q8NGP0 309 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 OR1B1Q8NGR6 318 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 FAM222BQ8WU58 562 aa12.12□□□□□ -0.47
ATG4B-206ENST00000405546 TRAV9-1A0A075B6T8 112 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 K7ERU9 68 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 GNG7O60262 68 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 PPBPP02775 128 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 C8orf88P0DMB2 117 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 CD69Q07108 199 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 TPPP3Q9BW30 176 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 FAM231BA6NCW3 169 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 AREGP15514 252 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 PRR20EP86478 221 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 PRR20CP86479 221 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 PRR20DP86480 221 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 PRR20BP86481 221 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 PRR20AP86496 221 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 ZNF430Q9H8G1 570 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-206ENST00000405546 TPSG1Q9NRR2 321 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 SPTBN4Q9H254 2564 aa12.11□□□□□ -0.47
ATG4B-206ENST00000405546 A0A1W2PRD5 423 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 A0A1W2PRF3 423 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 A0A1W2PRM7 423 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 C7orf71A4D174 169 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 H3BUT2 72 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 SUB1P53999 127 aaKnown RBP eCLIP12.1□□□□□ -0.47
ATG4B-206ENST00000405546 OSR1Q8TAX0 266 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-206ENST00000405546 C11orf52Q96A22 123 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 SMIM27A0A1W2PRY6 76 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 FAM90A27PA6NNH2 459 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 C10orf113Q5VZT2 155 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 Q71RC1 249 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-206ENST00000405546 LINC01560Q8TB33 94 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 RITA1Q96K30 269 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 RALYQ9UKM9 306 aaKnown RBP12.1□□□□□ -0.47
ATG4B-206ENST00000405546 ARHGAP32A7KAX9 2087 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 IGHV1-24A0A0C4DH33 117 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 TMEM178BH3BS89 294 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 SYS1-DBNDD2H3BUS1 97 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 DLL1O00548 723 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 TBR1Q16650 682 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 PNKDQ8N490 385 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 AP1S3Q96PC3 154 aa12.1□□□□□ -0.47
ATG4B-206ENST00000405546 CHD8Q9HCK8 2581 aa12.09□□□□□ -0.47
ATG4B-206ENST00000405546 FAM87AP0C7U9 286 aa12.09□□□□□ -0.47
ATG4B-206ENST00000405546 VMA21Q3ZAQ7 101 aa12.09□□□□□ -0.47
ATG4B-206ENST00000405546 ZNF257Q9Y2Q1 563 aa12.09□□□□□ -0.47
ATG4B-206ENST00000405546 AMMECR1Q9Y4X0 333 aaPredicted RBP12.09□□□□□ -0.47
ATG4B-206ENST00000405546 WT1-ASQ06250 92 aa12.09□□□□□ -0.47
ATG4B-206ENST00000405546 PRSS57Q6UWY2 283 aa12.09□□□□□ -0.47
ATG4B-206ENST00000405546 OR1N2Q8NGR9 330 aa12.09□□□□□ -0.47
ATG4B-206ENST00000405546 RNASE6Q93091 150 aaKnown RBP12.09□□□□□ -0.47
ATG4B-206ENST00000405546 PAXXQ9BUH6 204 aa12.09□□□□□ -0.47
ATG4B-206ENST00000405546 A0A1W2PRE2 83 aa12.08□□□□□ -0.47
ATG4B-206ENST00000405546 K7EMI3 77 aa12.08□□□□□ -0.47
ATG4B-206ENST00000405546 SLC25A33Q9BSK2 321 aa12.08□□□□□ -0.47
ATG4B-206ENST00000405546 NGBQ9NPG2 151 aa12.08□□□□□ -0.47
ATG4B-206ENST00000405546 THBDP07204 575 aa12.08□□□□□ -0.48
ATG4B-206ENST00000405546 C2orf83Q53S99 150 aa12.08□□□□□ -0.48
ATG4B-206ENST00000405546 WFDC3Q8IUB2 231 aa12.08□□□□□ -0.48
ATG4B-206ENST00000405546 DEFB125Q8N687 156 aa12.08□□□□□ -0.48
ATG4B-206ENST00000405546 RPL24P83731 157 aaKnown RBP12.08□□□□□ -0.48
ATG4B-206ENST00000405546 VSTM2AQ8TAG5 236 aa12.08□□□□□ -0.48
ATG4B-206ENST00000405546 INSIG2Q9Y5U4 225 aa12.08□□□□□ -0.48
ATG4B-206ENST00000405546 ARF6P62330 175 aa12.07□□□□□ -0.48
ATG4B-206ENST00000405546 IGFBPL1Q8WX77 278 aa12.07□□□□□ -0.48
ATG4B-206ENST00000405546 PTPRBP23467 1997 aa12.07□□□□□ -0.48
ATG4B-206ENST00000405546 LY6HO94772 140 aa12.07□□□□□ -0.48
ATG4B-206ENST00000405546 CNTFRP26992 372 aa12.07□□□□□ -0.48
ATG4B-206ENST00000405546 LINC00322Q6ZN03 302 aaPredicted RBP12.07□□□□□ -0.48
ATG4B-206ENST00000405546 LINC00305Q7Z4B0 112 aa12.07□□□□□ -0.48
ATG4B-206ENST00000405546 CTSZQ9UBR2 303 aa12.07□□□□□ -0.48
ATG4B-206ENST00000405546 F11RQ9Y624 299 aaKnown RBP12.07□□□□□ -0.48
ATG4B-206ENST00000405546 CNIH1O95406 144 aa12.06□□□□□ -0.48
ATG4B-206ENST00000405546 SLC25A5P05141 298 aaKnown RBP12.06□□□□□ -0.48
ATG4B-206ENST00000405546 RHOGP84095 191 aa12.06□□□□□ -0.48
ATG4B-206ENST00000405546 MEF2CQ06413 473 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-206ENST00000405546 TEX36Q5VZQ5 186 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms