RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 RPLP1P05386 114 aaKnown RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 PSG1P11464 419 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 FCGR2BP31994 310 aaPredicted RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 ZNF672Q499Z4 452 aaPredicted RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 FAM162BQ5T6X4 162 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 ASPHD1Q5U4P2 390 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 GFRALQ6UXV0 394 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 SIGLEC15Q6ZMC9 328 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 OR4F17Q8NGA8 305 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 OR1B1Q8NGR6 318 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 NPFFR1Q9GZQ6 430 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 LPAR2Q9HBW0 351 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 HIGD1AQ9Y241 93 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 MALRD1Q5VYJ5 2156 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 LOC102724200A0A096LPH7 203 aaPredicted RBP3.04□□□□□ -1.92
RTN4-209ENST00000405240 A8MWL6 223 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 M0R1W7 72 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 NDUFB8O95169 186 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 SLC25A5P05141 298 aaKnown RBP3.04□□□□□ -1.92
RTN4-209ENST00000405240 AMTP48728 403 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 SLC35B1P78383 322 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 SRSF2Q01130 221 aaKnown RBP3.04□□□□□ -1.92
RTN4-209ENST00000405240 PAX8Q06710 450 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 SPATA45Q537H7 98 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 ALKBH2Q6NS38 261 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 RBPMS2Q6ZRY4 209 aaKnown RBP3.04□□□□□ -1.92
RTN4-209ENST00000405240 C1orf122Q6ZSJ8 110 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 ZNF491Q8N8L2 437 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 SRSF12Q8WXF0 261 aaKnown RBP3.04□□□□□ -1.92
RTN4-209ENST00000405240 C17orf77Q96MU5 243 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 SAMD10Q9BYL1 202 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 UQCR10Q9UDW1 63 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 RNF24Q9Y225 148 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 CADP27708 2225 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 DMXL1Q9Y485 3027 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 IGLV11-55A0A075B6I3 123 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 TRAV9-2A0A087WT02 112 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 DLEU1O43261 78 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 SPINK4O60575 86 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 PLAUP00749 431 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 LINC00614P0C842 121 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 BTF3P20290 206 aaKnown RBP3.04□□□□□ -1.92
RTN4-209ENST00000405240 CRIP1P50238 77 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 FBLN7Q53RD9 439 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 TTC9CQ8N5M4 171 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 KIR3DL3Q8N743 410 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 TMEM208Q9BTX3 173 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 ZFP30Q9Y2G7 519 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 NAV3Q8IVL0 2385 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 NBEAQ8NFP9 2946 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 ZGRF1Q86YA3 2104 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 A0A1B0GW15 77 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 IGHV3-48P01763 117 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 CD3EP07766 207 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 PMCHP20382 165 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 UBE2G1P62253 170 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 PDE6HQ13956 83 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 PRR30Q53SZ7 412 aaPredicted RBP3.04□□□□□ -1.92
RTN4-209ENST00000405240 Q71RC1 249 aaPredicted RBP3.04□□□□□ -1.92
RTN4-209ENST00000405240 FAM19A2Q8N3H0 131 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 AJUBAQ96IF1 538 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 FANCD2OSQ96PS1 177 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 PAM16Q9Y3D7 125 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 INSIG2Q9Y5U4 225 aa3.04□□□□□ -1.92
RTN4-209ENST00000405240 PPIAL4CA0A0B4J2A2 164 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 IGHV1-24A0A0C4DH33 117 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.03□□□□□ -1.92
RTN4-209ENST00000405240 PPIAL4GP0DN37 164 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 ORM2P19652 201 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 KRTDAPP60985 99 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 TCF24Q7RTU0 167 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 MUC15Q8N387 334 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 C22orf15Q8WYQ4 148 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 FAM103A1Q9BTL3 118 aaKnown RBP3.03□□□□□ -1.92
RTN4-209ENST00000405240 WNT10AQ9GZT5 417 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 SERTAD4Q9NUC0 356 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 AKAP13Q12802 2813 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 SERTM2A0A1B0GWG4 89 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 P01737 135 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 OR5AL1P0C617 328 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 EGR2P11161 476 aaPredicted RBP3.03□□□□□ -1.92
RTN4-209ENST00000405240 TSPOP30536 169 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 PSG3Q16557 428 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 ZNF705AQ6ZN79 300 aaPredicted RBP3.03□□□□□ -1.92
RTN4-209ENST00000405240 ZC2HC1AQ96GY0 325 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 SSBP4Q9BWG4 385 aaPredicted RBP3.03□□□□□ -1.92
RTN4-209ENST00000405240 FBXL15Q9H469 300 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 GSX1Q9H4S2 264 aaPredicted RBP3.03□□□□□ -1.92
RTN4-209ENST00000405240 ZNF292O60281 2723 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 TRAV30A0A087WSZ9 112 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 IGHV3-72A0A0B4J1Y9 119 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 SH2D7A6NKC9 451 aaPredicted RBP3.03□□□□□ -1.92
RTN4-209ENST00000405240 OOSP1A8MZH6 123 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 NBR2O15453 112 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 IGHG4P01861 327 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 LIPFP07098 398 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 GPR6P46095 362 aaPredicted RBP3.03□□□□□ -1.92
RTN4-209ENST00000405240 KLHDC1Q8N7A1 406 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 BLNKQ8WV28 456 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 SCNM1Q9BWG6 230 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms