RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 CHRDL1Q9BU40 450 aa12.44□□□□□ -0.42
ATG4B-205ENST00000404914 ZNF785A8K8V0 405 aa12.44□□□□□ -0.42
ATG4B-205ENST00000404914 A8MWL6 223 aa12.44□□□□□ -0.42
ATG4B-205ENST00000404914 HSBP1L1C9JCN9 74 aa12.44□□□□□ -0.42
ATG4B-205ENST00000404914 APOHP02749 345 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-205ENST00000404914 ERHP84090 104 aaKnown RBP12.44□□□□□ -0.42
ATG4B-205ENST00000404914 OR1L4Q8NGR5 311 aa12.44□□□□□ -0.42
ATG4B-205ENST00000404914 RITA1Q96K30 269 aa12.44□□□□□ -0.42
ATG4B-205ENST00000404914 MAP1LC3CQ9BXW4 147 aa12.44□□□□□ -0.42
ATG4B-205ENST00000404914 APC2O95996 2303 aa12.43□□□□□ -0.42
ATG4B-205ENST00000404914 ATMQ13315 3056 aa12.43□□□□□ -0.42
ATG4B-205ENST00000404914 TMEM238LA0A1B0GVL6 79 aa12.43□□□□□ -0.42
ATG4B-205ENST00000404914 NBEAP1P0C6P0 100 aa12.43□□□□□ -0.42
ATG4B-205ENST00000404914 CCL3L1P16619 93 aa12.43□□□□□ -0.42
ATG4B-205ENST00000404914 PIP4P2Q8N4L2 257 aa12.43□□□□□ -0.42
ATG4B-205ENST00000404914 NEU4Q8WWR8 484 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-205ENST00000404914 JMJD8Q96S16 334 aa12.43□□□□□ -0.42
ATG4B-205ENST00000404914 CSTL1Q9H114 145 aa12.43□□□□□ -0.42
ATG4B-205ENST00000404914 LTAP01374 205 aa12.43□□□□□ -0.42
ATG4B-205ENST00000404914 IGLC1P0CG04 106 aa12.43□□□□□ -0.42
ATG4B-205ENST00000404914 HIST1H1AQ02539 215 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-205ENST00000404914 FOXC1Q12948 553 aa12.43□□□□□ -0.42
ATG4B-205ENST00000404914 SRSF6Q13247 344 aaKnown RBP12.43□□□□□ -0.42
ATG4B-205ENST00000404914 RBPMS2Q6ZRY4 209 aaKnown RBP12.43□□□□□ -0.42
ATG4B-205ENST00000404914 MEGF9Q9H1U4 602 aa12.43□□□□□ -0.42
ATG4B-205ENST00000404914 C7orf71A4D174 169 aa12.42□□□□□ -0.42
ATG4B-205ENST00000404914 M0R1B8 84 aa12.42□□□□□ -0.42
ATG4B-205ENST00000404914 CHEK1O14757 476 aa12.42□□□□□ -0.42
ATG4B-205ENST00000404914 LIPFP07098 398 aa12.42□□□□□ -0.42
ATG4B-205ENST00000404914 HCP5Q6MZN7 132 aa12.42□□□□□ -0.42
ATG4B-205ENST00000404914 ZNF71Q9NQZ8 489 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-205ENST00000404914 CHD8Q9HCK8 2581 aa12.42□□□□□ -0.42
ATG4B-205ENST00000404914 FAM231BA6NCW3 169 aa12.42□□□□□ -0.42
ATG4B-205ENST00000404914 FCN3O75636 299 aa12.42□□□□□ -0.42
ATG4B-205ENST00000404914 LOXL1Q08397 574 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-205ENST00000404914 TMEM164Q5U3C3 297 aa12.42□□□□□ -0.42
ATG4B-205ENST00000404914 LINC01545Q5VT33 79 aa12.42□□□□□ -0.42
ATG4B-205ENST00000404914 PET117Q6UWS5 81 aa12.42□□□□□ -0.42
ATG4B-205ENST00000404914 TMEM116Q8NCL8 245 aa12.42□□□□□ -0.42
ATG4B-205ENST00000404914 IGF2RP11717 2491 aa12.42□□□□□ -0.42
ATG4B-205ENST00000404914 TCRAP04437 139 aa12.41□□□□□ -0.42
ATG4B-205ENST00000404914 RPS20P60866 119 aaKnown RBP12.41□□□□□ -0.42
ATG4B-205ENST00000404914 ZNF833PQ6ZTB9 187 aa12.41□□□□□ -0.42
ATG4B-205ENST00000404914 SMIM15Q7Z3B0 74 aa12.41□□□□□ -0.42
ATG4B-205ENST00000404914 THAP8Q8NA92 274 aa12.41□□□□□ -0.42
ATG4B-205ENST00000404914 FAM222BQ8WU58 562 aa12.41□□□□□ -0.42
ATG4B-205ENST00000404914 Q9H3A6 140 aa12.41□□□□□ -0.42
ATG4B-205ENST00000404914 SLC25A15Q9Y619 301 aa12.41□□□□□ -0.42
ATG4B-205ENST00000404914 ACACAQ13085 2346 aa12.41□□□□□ -0.42
ATG4B-205ENST00000404914 HLA-DRB1P01911 266 aa12.41□□□□□ -0.42
ATG4B-205ENST00000404914 FAM71F2Q6NXP2 309 aa12.41□□□□□ -0.42
ATG4B-205ENST00000404914 C16orf54Q6UWD8 224 aa12.41□□□□□ -0.42
ATG4B-205ENST00000404914 FLYWCH2Q96CP2 140 aaKnown RBP12.41□□□□□ -0.42
ATG4B-205ENST00000404914 NDFIP1Q9BT67 221 aa12.41□□□□□ -0.42
ATG4B-205ENST00000404914 A0A1W2PPI3 338 aa12.4□□□□□ -0.42
ATG4B-205ENST00000404914 ARMS2P0C7Q2 107 aa12.4□□□□□ -0.42
ATG4B-205ENST00000404914 COX8AP10176 69 aa12.4□□□□□ -0.42
ATG4B-205ENST00000404914 GP9P14770 177 aa12.4□□□□□ -0.42
ATG4B-205ENST00000404914 ATP5IP56385 69 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-205ENST00000404914 FXYD7P58549 80 aa12.4□□□□□ -0.42
ATG4B-205ENST00000404914 MZT1Q08AG7 82 aa12.4□□□□□ -0.42
ATG4B-205ENST00000404914 C1orf162Q8NEQ5 155 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-205ENST00000404914 CSMD1Q96PZ7 3565 aa12.4□□□□□ -0.42
ATG4B-205ENST00000404914 hADV38S2A0JD32 116 aa12.4□□□□□ -0.42
ATG4B-205ENST00000404914 BHLHA15Q7RTS1 189 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-205ENST00000404914 EXOC3-AS1Q8N2X6 119 aa12.4□□□□□ -0.42
ATG4B-205ENST00000404914 OSR1Q8TAX0 266 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-205ENST00000404914 SCNM1Q9BWG6 230 aa12.4□□□□□ -0.42
ATG4B-205ENST00000404914 HILPDAQ9Y5L2 63 aa12.4□□□□□ -0.42
ATG4B-205ENST00000404914 APOA2P02652 100 aa12.4□□□□□ -0.43
ATG4B-205ENST00000404914 WFDC8Q8IUA0 241 aa12.4□□□□□ -0.43
ATG4B-205ENST00000404914 TMEM178AQ8NBL3 297 aa12.4□□□□□ -0.43
ATG4B-205ENST00000404914 FER1L6-AS2Q96M78 137 aa12.4□□□□□ -0.43
ATG4B-205ENST00000404914 ZNF747Q9BV97 191 aa12.4□□□□□ -0.43
ATG4B-205ENST00000404914 IGLV2-23P01705 113 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 OR5AL1P0C617 328 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 FGF6P10767 208 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 MRGPRG-AS1Q2M3A8 158 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 FAM162BQ5T6X4 162 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 ZNF788Q6ZQV5 615 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 ZNF492Q9P255 531 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 RNF7Q9UBF6 113 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 PEF1Q9UBV8 284 aaKnown RBP12.39□□□□□ -0.43
ATG4B-205ENST00000404914 IGLV2-11P01706 119 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 COL8A1P27658 744 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 HTR1DP28221 377 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 CT83Q5H943 113 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 C22orf34Q6ZV56 151 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 PRNTQ86SH4 94 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 ZCCHC24Q8N2G6 241 aaKnown RBP12.39□□□□□ -0.43
ATG4B-205ENST00000404914 C5orf17Q8NAS9 161 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 OR5AN1Q8NGI8 311 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 DAZAP1Q96EP5 407 aaKnown RBP12.39□□□□□ -0.43
ATG4B-205ENST00000404914 PERPQ96FX8 193 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 NCOR1P1Q9H4R4 102 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 DKK4Q9UBT3 224 aa12.39□□□□□ -0.43
ATG4B-205ENST00000404914 PKDREJQ9NTG1 2253 aa12.38□□□□□ -0.43
ATG4B-205ENST00000404914 A0A096LNJ9 63 aa12.38□□□□□ -0.43
ATG4B-205ENST00000404914 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.38□□□□□ -0.43
ATG4B-205ENST00000404914 SLC25A17O43808 307 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms