RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ZNF702PQ9H963 129 aa16.33■□□□□ 0.2
TPM1-208ENST00000404484 A0A0G2JLM5 398 aa16.32■□□□□ 0.2
TPM1-208ENST00000404484 F8W036 122 aa16.32■□□□□ 0.2
TPM1-208ENST00000404484 IGHV3-23P01764 117 aa16.32■□□□□ 0.2
TPM1-208ENST00000404484 PF4V1P10720 104 aa16.32■□□□□ 0.2
TPM1-208ENST00000404484 S100A7P31151 101 aa16.32■□□□□ 0.2
TPM1-208ENST00000404484 SLC35B1P78383 322 aa16.32■□□□□ 0.2
TPM1-208ENST00000404484 RXFP4Q8TDU9 374 aa16.32■□□□□ 0.2
TPM1-208ENST00000404484 RNF125Q96EQ8 232 aa16.32■□□□□ 0.2
TPM1-208ENST00000404484 OR7C2O60412 319 aa16.31■□□□□ 0.2
TPM1-208ENST00000404484 IGHG4P01861 327 aa16.31■□□□□ 0.2
TPM1-208ENST00000404484 CTSGP08311 255 aa16.31■□□□□ 0.2
TPM1-208ENST00000404484 GPR183P32249 361 aa16.31■□□□□ 0.2
TPM1-208ENST00000404484 Q8N2B8 174 aa16.31■□□□□ 0.2
TPM1-208ENST00000404484 TXNDC17Q9BRA2 123 aa16.31■□□□□ 0.2
TPM1-208ENST00000404484 ARL2-SNX15V9GYD0 113 aa16.31■□□□□ 0.2
TPM1-208ENST00000404484 WI2-2373I1.2A0A1W2PRP0 233 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 C9JQL5 133 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 CLDN34H7C241 214 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 MEF2BQ02080 365 aaPredicted RBP16.3■□□□□ 0.2
TPM1-208ENST00000404484 FAM209BQ5JX69 171 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 ZNF600Q6ZNG1 722 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 CCDC140Q96MF4 163 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 RNF24Q9Y225 148 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 TGOLN2O43493 480 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 IL4P05112 153 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 CLEC3BP05452 202 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 TMEM95Q3KNT9 176 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 C10orf91Q5T1B1 145 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 ZNF491Q8N8L2 437 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 OR5AU1Q8NGC0 362 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 UHRF2Q96PU4 802 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 SLC25A2Q9BXI2 301 aa16.3■□□□□ 0.2
TPM1-208ENST00000404484 MRPL27Q9P0M9 148 aaKnown RBP16.3■□□□□ 0.2
TPM1-208ENST00000404484 CARHSP1Q9Y2V2 147 aaKnown RBP16.3■□□□□ 0.2
TPM1-208ENST00000404484 SRP19P09132 144 aaKnown RBP16.29■□□□□ 0.2
TPM1-208ENST00000404484 RELQ04864 619 aaPredicted RBP16.29■□□□□ 0.2
TPM1-208ENST00000404484 CLEC19AQ6UXS0 136 aa16.29■□□□□ 0.2
TPM1-208ENST00000404484 FAM167A-AS1Q96KT0 104 aa16.29■□□□□ 0.2
TPM1-208ENST00000404484 PAGE4O60829 102 aa16.28■□□□□ 0.2
TPM1-208ENST00000404484 RNASE1P07998 156 aaKnown RBP16.28■□□□□ 0.2
TPM1-208ENST00000404484 RAB9AP51151 201 aa16.28■□□□□ 0.2
TPM1-208ENST00000404484 RPL15P61313 204 aaKnown RBP16.28■□□□□ 0.2
TPM1-208ENST00000404484 SUN5Q8TC36 379 aa16.28■□□□□ 0.2
TPM1-208ENST00000404484 CHRDL1Q9BU40 450 aa16.28■□□□□ 0.2
TPM1-208ENST00000404484 APOC3P02656 99 aa16.27■□□□□ 0.2
TPM1-208ENST00000404484 ADMP35318 185 aa16.27■□□□□ 0.2
TPM1-208ENST00000404484 SOHLH1Q5JUK2 328 aa16.27■□□□□ 0.2
TPM1-208ENST00000404484 PAXXQ9BUH6 204 aa16.27■□□□□ 0.2
TPM1-208ENST00000404484 SLC25A39Q9BZJ4 359 aaPredicted RBP16.27■□□□□ 0.2
TPM1-208ENST00000404484 GNB4Q9HAV0 340 aa16.27■□□□□ 0.2
TPM1-208ENST00000404484 BMPR1BO00238 502 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 ADCYAP1P18509 176 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 PSMB8P28062 276 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 UBE2L3P68036 154 aaKnown RBP16.26■□□□□ 0.19
TPM1-208ENST00000404484 MORN5Q5VZ52 161 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 TEX38Q6PEX7 206 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 OR51M1Q9H341 326 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 PUS1Q9Y606 427 aaKnown RBP eCLIP16.26■□□□□ 0.19
TPM1-208ENST00000404484 TENM1Q9UKZ4 2725 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 TRAV5A0A0B4J249 113 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 C11orf94C9JXX5 98 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 TMEM250H0YL14 139 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 PDE6DO43924 150 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 ELANEP08246 267 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 FOXE3Q13461 319 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 CST9LP1Q5W188 147 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 SVBPQ8N300 66 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 ZNF503Q96F45 646 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 SHANK2-AS3Q9BTD1 123 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 KLK15Q9H2R5 256 aa16.26■□□□□ 0.19
TPM1-208ENST00000404484 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.25■□□□□ 0.19
TPM1-208ENST00000404484 H3BRN7 92 aa16.25■□□□□ 0.19
TPM1-208ENST00000404484 CD81P60033 236 aa16.25■□□□□ 0.19
TPM1-208ENST00000404484 UBE2G2P60604 165 aa16.25■□□□□ 0.19
TPM1-208ENST00000404484 ZNF329Q86UD4 541 aa16.25■□□□□ 0.19
TPM1-208ENST00000404484 CCDC28AQ8IWP9 274 aa16.25■□□□□ 0.19
TPM1-208ENST00000404484 CYB561D1Q8N8Q1 229 aa16.25■□□□□ 0.19
TPM1-208ENST00000404484 F6UZH7 168 aa16.24■□□□□ 0.19
TPM1-208ENST00000404484 USF2Q15853 346 aaPredicted RBP16.24■□□□□ 0.19
TPM1-208ENST00000404484 ZNF343Q6P1L6 599 aa16.24■□□□□ 0.19
TPM1-208ENST00000404484 OR4F5Q8NH21 305 aa16.24■□□□□ 0.19
TPM1-208ENST00000404484 OR4F4Q96R69 305 aa16.24■□□□□ 0.19
TPM1-208ENST00000404484 TMEM14CQ9P0S9 112 aa16.24■□□□□ 0.19
TPM1-208ENST00000404484 RABAC1Q9UI14 185 aa16.24■□□□□ 0.19
TPM1-208ENST00000404484 FAM181BA6NEQ2 426 aa16.23■□□□□ 0.19
TPM1-208ENST00000404484 FAM74A7A6NL05 159 aa16.23■□□□□ 0.19
TPM1-208ENST00000404484 ARL3P36405 182 aa16.23■□□□□ 0.19
TPM1-208ENST00000404484 NKX6-2Q9C056 277 aaPredicted RBP16.23■□□□□ 0.19
TPM1-208ENST00000404484 A0A1W2PRE2 83 aa16.22■□□□□ 0.19
TPM1-208ENST00000404484 CRYBA1P05813 215 aa16.22■□□□□ 0.19
TPM1-208ENST00000404484 OR10J4P0C629 311 aa16.22■□□□□ 0.19
TPM1-208ENST00000404484 CEBPGP53567 150 aa16.22■□□□□ 0.19
TPM1-208ENST00000404484 TOMM20LQ6UXN7 152 aa16.22■□□□□ 0.19
TPM1-208ENST00000404484 OR4X2Q8NGF9 303 aa16.22■□□□□ 0.19
TPM1-208ENST00000404484 ANK2Q01484 3957 aa16.22■□□□□ 0.19
TPM1-208ENST00000404484 BPIFA4PQ86YQ2 179 aa16.21■□□□□ 0.19
TPM1-208ENST00000404484 FXYD5Q96DB9 178 aa16.21■□□□□ 0.19
TPM1-208ENST00000404484 SERTAD4Q9NUC0 356 aa16.21■□□□□ 0.19
TPM1-208ENST00000404484 SNAPINO95295 136 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms