RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 GFRALQ6UXV0 394 aa8.56□□□□□ -1.04
CLIP4-204ENST00000404424 MRPS16Q9Y3D3 137 aaKnown RBP8.56□□□□□ -1.04
CLIP4-204ENST00000404424 ASPMQ8IZT6 3477 aa8.56□□□□□ -1.04
CLIP4-204ENST00000404424 TRBV6-1A0A0K0K1D8 114 aa8.56□□□□□ -1.04
CLIP4-204ENST00000404424 B9A039 149 aa8.56□□□□□ -1.04
CLIP4-204ENST00000404424 IGLC1P0CG04 106 aa8.56□□□□□ -1.04
CLIP4-204ENST00000404424 CNTFRP26992 372 aa8.56□□□□□ -1.04
CLIP4-204ENST00000404424 RBPJQ06330 500 aa8.56□□□□□ -1.04
CLIP4-204ENST00000404424 GTSF1Q8WW33 167 aa8.56□□□□□ -1.04
CLIP4-204ENST00000404424 C1RLQ9NZP8 487 aa8.56□□□□□ -1.04
CLIP4-204ENST00000404424 RNF24Q9Y225 148 aa8.56□□□□□ -1.04
CLIP4-204ENST00000404424 CRXO43186 299 aaPredicted RBP8.55□□□□□ -1.04
CLIP4-204ENST00000404424 PSG1P11464 419 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 PRSS33Q8NF86 280 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 ABHD17AQ96GS6 310 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 NDFIP1Q9BT67 221 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 TMEM70Q9BUB7 260 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 SLC25A39Q9BZJ4 359 aaPredicted RBP8.55□□□□□ -1.04
CLIP4-204ENST00000404424 ARFGEF3Q5TH69 2177 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 IGHV3-21A0A0B4J1V1 117 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 HOXB4P17483 251 aaPredicted RBP8.55□□□□□ -1.04
CLIP4-204ENST00000404424 TSPOP30536 169 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 LYZP61626 148 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 Q56UQ5 140 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 LCN12Q6JVE5 192 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 Q86TA4 180 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 SRSF12Q8WXF0 261 aaKnown RBP8.55□□□□□ -1.04
CLIP4-204ENST00000404424 URB1-AS1Q96HZ7 61 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 PGLYRP4Q96LB8 373 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 RASL11BQ9BPW5 248 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 SH3BGRL2Q9UJC5 107 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 CUL9Q8IWT3 2517 aa8.55□□□□□ -1.04
CLIP4-204ENST00000404424 I3L2K1 104 aa8.54□□□□□ -1.04
CLIP4-204ENST00000404424 NPSP0C0P6 89 aa8.54□□□□□ -1.04
CLIP4-204ENST00000404424 COL8A1P27658 744 aa8.54□□□□□ -1.04
CLIP4-204ENST00000404424 FOXA3P55318 350 aaPredicted RBP8.54□□□□□ -1.04
CLIP4-204ENST00000404424 LEMD1Q68G75 181 aa8.54□□□□□ -1.04
CLIP4-204ENST00000404424 LHFPL4Q7Z7J7 247 aa8.54□□□□□ -1.04
CLIP4-204ENST00000404424 ATOH7Q8N100 152 aa8.54□□□□□ -1.04
CLIP4-204ENST00000404424 RPEQ96AT9 228 aa8.54□□□□□ -1.04
CLIP4-204ENST00000404424 HAX1O00165 279 aa8.54□□□□□ -1.04
CLIP4-204ENST00000404424 APELAP0DMC3 54 aa8.54□□□□□ -1.04
CLIP4-204ENST00000404424 C16orf54Q6UWD8 224 aa8.54□□□□□ -1.04
CLIP4-204ENST00000404424 EP300Q09472 2414 aaPredicted RBP8.53□□□□□ -1.04
CLIP4-204ENST00000404424 CHEK1O14757 476 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 OR5AL1P0C617 328 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 TFPI2P48307 235 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 LYPD1Q8N2G4 141 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 STPG4Q8N801 248 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 Q8NA96 180 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 SCNM1Q9BWG6 230 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 FBXL15Q9H469 300 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 PLXNB1O43157 2135 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 CNOT1A5YKK6 2376 aaKnown RBP8.53□□□□□ -1.04
CLIP4-204ENST00000404424 PPIAL4CA0A0B4J2A2 164 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 H3BTX0 84 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 IGLV2-11P01706 119 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 CD3EP07766 207 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 PPIAL4GP0DN37 164 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 BPIFA4PQ86YQ2 179 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 TMEM75Q8N9X5 138 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 GSX1Q9H4S2 264 aaPredicted RBP8.53□□□□□ -1.04
CLIP4-204ENST00000404424 PPP1R14DQ9NXH3 145 aa8.53□□□□□ -1.04
CLIP4-204ENST00000404424 LOC102724200A0A096LPH7 203 aaPredicted RBP8.52□□□□□ -1.05
CLIP4-204ENST00000404424 LEPROTL1O95214 131 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 IGLL1P15814 213 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 PLGLAQ15195 96 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 MAJINQ3KP22 176 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 FAM120AOSQ5T036 256 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 GOLT1AQ6ZVE7 132 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 CFAP47Q6ZTR5 3102 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 TRBV19A0A075B6N1 114 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 IGHV1-24A0A0C4DH33 117 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 LY6LH3BQJ8 138 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 K7EQM0 130 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 IGKV1-17P01599 117 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 APOHP02749 345 aaPredicted RBP8.52□□□□□ -1.05
CLIP4-204ENST00000404424 S100A7AQ86SG5 101 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 PRNTQ86SH4 94 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 ZGRF1Q86YA3 2104 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 CIARTQ8N365 385 aaPredicted RBP8.52□□□□□ -1.05
CLIP4-204ENST00000404424 OR4F17Q8NGA8 305 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 SHANK2-AS3Q9BTD1 123 aa8.52□□□□□ -1.05
CLIP4-204ENST00000404424 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.51□□□□□ -1.05
CLIP4-204ENST00000404424 TRAV8-1A0A0A6YYK1 113 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 SYS1-DBNDD2H3BUS1 97 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 LIPFP07098 398 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 EXOC3-AS1Q8N2X6 119 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 ORAOV1Q8WV07 137 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 ST20Q9HBF5 79 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 CLEC5AQ9NY25 188 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 A0A1B0GW15 77 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 OR4C46A6NHA9 309 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 H3BRN7 92 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 NDUFB8O95169 186 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 COX7A1P24310 79 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 KIR3DL3Q8N743 410 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 GATD1Q8NB37 220 aa8.51□□□□□ -1.05
CLIP4-204ENST00000404424 MALRD1Q5VYJ5 2156 aa8.5□□□□□ -1.05
CLIP4-204ENST00000404424 A0A1B0GUT8 65 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms