RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 PLXNB2O15031 1838 aa8.06□□□□□ -1.12
HERC3-202ENST00000402738 PATJQ8NI35 1801 aa8.06□□□□□ -1.12
HERC3-202ENST00000402738 RBBP6Q7Z6E9 1792 aaKnown RBP8.06□□□□□ -1.12
HERC3-202ENST00000402738 GFRA3O60609 400 aa8.06□□□□□ -1.12
HERC3-202ENST00000402738 CNTFRP26992 372 aa8.06□□□□□ -1.12
HERC3-202ENST00000402738 IGHV1-24A0A0C4DH33 117 aa8.06□□□□□ -1.12
HERC3-202ENST00000402738 LINC00473A8K010 186 aa8.06□□□□□ -1.12
HERC3-202ENST00000402738 C5orf67F2Z3F1 127 aa8.06□□□□□ -1.12
HERC3-202ENST00000402738 H3BMG7 143 aa8.06□□□□□ -1.12
HERC3-202ENST00000402738 K7ERJ3 54 aa8.06□□□□□ -1.12
HERC3-202ENST00000402738 HIST1H4AP62805 103 aaKnown RBP8.06□□□□□ -1.12
HERC3-202ENST00000402738 PRB3Q04118 309 aaPredicted RBP8.06□□□□□ -1.12
HERC3-202ENST00000402738 VWC2Q2TAL6 325 aa8.06□□□□□ -1.12
HERC3-202ENST00000402738 C11orf68Q9H3H3 251 aaKnown RBP8.06□□□□□ -1.12
HERC3-202ENST00000402738 V9GYV3 84 aa8.06□□□□□ -1.12
HERC3-202ENST00000402738 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.05□□□□□ -1.12
HERC3-202ENST00000402738 TRAV40A0A0B4J280 105 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 Q6ZT83 130 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 PPDPFLQ8WWR9 84 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 YAE1D1Q9NRH1 226 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 TRAV21A0A0B4J279 112 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 B5MCH6 92 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 PSPNO60542 156 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 COA6Q5JTJ3 125 aaKnown RBP8.05□□□□□ -1.12
HERC3-202ENST00000402738 RNF115Q9Y4L5 304 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 PTPRDP23468 1912 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 ARMS2P0C7Q2 107 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 PVRIGQ6DKI7 326 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 AMTNQ6UX39 209 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 ZNF329Q86UD4 541 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 NUPR1O60356 82 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 DOCK8Q8NF50 2099 aa8.05□□□□□ -1.12
HERC3-202ENST00000402738 LOC102723996A0A087X1L8 192 aa8.04□□□□□ -1.12
HERC3-202ENST00000402738 C20orf204Q6ZNR8 217 aa8.04□□□□□ -1.12
HERC3-202ENST00000402738 ZIC4Q8N9L1 334 aa8.04□□□□□ -1.12
HERC3-202ENST00000402738 DEFB124Q8NES8 71 aa8.04□□□□□ -1.12
HERC3-202ENST00000402738 GLMPQ8WWB7 406 aa8.04□□□□□ -1.12
HERC3-202ENST00000402738 ANAPC10Q9UM13 185 aa8.04□□□□□ -1.12
HERC3-202ENST00000402738 PARP14Q460N5 1801 aa8.04□□□□□ -1.12
HERC3-202ENST00000402738 CHD3Q12873 2000 aaKnown RBP8.04□□□□□ -1.12
HERC3-202ENST00000402738 RPL15P61313 204 aaKnown RBP8.04□□□□□ -1.12
HERC3-202ENST00000402738 TRAV8-3A0A0A6YYJ7 113 aa8.04□□□□□ -1.12
HERC3-202ENST00000402738 AHRRA9YTQ3 701 aa8.04□□□□□ -1.12
HERC3-202ENST00000402738 MLANAQ16655 118 aa8.04□□□□□ -1.12
HERC3-202ENST00000402738 ZNF562Q6V9R5 426 aa8.04□□□□□ -1.12
HERC3-202ENST00000402738 CASP8AP2Q9UKL3 1982 aa8.04□□□□□ -1.12
HERC3-202ENST00000402738 SP7Q8TDD2 431 aaPredicted RBP8.04□□□□□ -1.12
HERC3-202ENST00000402738 LINC00312Q9Y6C7 94 aa8.04□□□□□ -1.12
HERC3-202ENST00000402738 TMEM8BA6NDV4 472 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 SH2D1AO60880 128 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 GLRXP35754 106 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 CFHR2P36980 270 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 IL15RAQ13261 267 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 FAM106AQ4KMX7 169 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 ASPHD1Q5U4P2 390 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 C1orf53Q5VUE5 145 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 CLEC19AQ6UXS0 136 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 PPP1R27Q86WC6 154 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 MAFAQ8NHW3 353 aaPredicted RBP8.03□□□□□ -1.12
HERC3-202ENST00000402738 IFITM1P13164 125 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 RRN3P1Q2M238 152 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 PPP1R32Q7Z5V6 425 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 SPACA3Q8IXA5 215 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 DEFB125Q8N687 156 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 C1orf147Q96MC9 270 aaPredicted RBP8.03□□□□□ -1.12
HERC3-202ENST00000402738 HEATR1Q9H583 2144 aaKnown RBP8.03□□□□□ -1.12
HERC3-202ENST00000402738 POLR2AP24928 1970 aaKnown RBP8.03□□□□□ -1.12
HERC3-202ENST00000402738 IGKV1-6A0A0C4DH72 117 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 GGTLC3B5MD39 225 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 E9PLN8 166 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 TOMM40O96008 361 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 CD28P10747 220 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 ANXA2RQ3ZCQ2 193 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 SLC25A39Q9BZJ4 359 aaPredicted RBP8.03□□□□□ -1.12
HERC3-202ENST00000402738 PHF3Q92576 2039 aaKnown RBP8.03□□□□□ -1.12
HERC3-202ENST00000402738 ABCA1O95477 2261 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 TEX48A0A1B0GUV7 120 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 FOXG1P55316 489 aaPredicted RBP8.03□□□□□ -1.12
HERC3-202ENST00000402738 TRIP6Q15654 476 aaKnown RBP8.03□□□□□ -1.12
HERC3-202ENST00000402738 FAM90A1Q86YD7 464 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 Q8TAT8 98 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 TMEM101Q96IK0 257 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 SPANXA1Q9NS26 97 aa8.03□□□□□ -1.12
HERC3-202ENST00000402738 RBMY1BA6NDE4 496 aaKnown RBP8.02□□□□□ -1.12
HERC3-202ENST00000402738 RBMY1EA6NEQ0 496 aaKnown RBP8.02□□□□□ -1.12
HERC3-202ENST00000402738 LINC01549A6NIU2 74 aa8.02□□□□□ -1.12
HERC3-202ENST00000402738 RBMY1DP0C7P1 496 aaKnown RBP8.02□□□□□ -1.12
HERC3-202ENST00000402738 RBMY1A1P0DJD3 496 aaKnown RBP8.02□□□□□ -1.12
HERC3-202ENST00000402738 RBMY1CP0DJD4 496 aa8.02□□□□□ -1.12
HERC3-202ENST00000402738 IGHV1-2P23083 117 aa8.02□□□□□ -1.12
HERC3-202ENST00000402738 Q6ZS49 121 aa8.02□□□□□ -1.12
HERC3-202ENST00000402738 ABHD17AQ96GS6 310 aa8.02□□□□□ -1.12
HERC3-202ENST00000402738 PLA2G2EQ9NZK7 142 aa8.02□□□□□ -1.12
HERC3-202ENST00000402738 NKX2-8O15522 239 aa8.02□□□□□ -1.13
HERC3-202ENST00000402738 CD7P09564 240 aa8.02□□□□□ -1.13
HERC3-202ENST00000402738 TMEM42Q69YG0 159 aa8.02□□□□□ -1.13
HERC3-202ENST00000402738 IGLV3-32A0A0A0MS00 114 aa8.02□□□□□ -1.13
HERC3-202ENST00000402738 TRGV3P03979 118 aa8.02□□□□□ -1.13
HERC3-202ENST00000402738 SNRPD3P62318 126 aaKnown RBP8.02□□□□□ -1.13
HERC3-202ENST00000402738 MRPS18CQ9Y3D5 142 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms