RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 OR5AL1P0C617 328 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 CCL3L1P16619 93 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 HTR1DP28221 377 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 TNFAIP6P98066 277 aaPredicted RBP11.22□□□□□ -0.61
APOB-202ENST00000399256 HCP5Q6MZN7 132 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 Q9H3A6 140 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 TCRAP04437 139 aa11.21□□□□□ -0.61
APOB-202ENST00000399256 COL8A1P27658 744 aa11.21□□□□□ -0.61
APOB-202ENST00000399256 SUB1P53999 127 aaKnown RBP eCLIP11.21□□□□□ -0.61
APOB-202ENST00000399256 CT83Q5H943 113 aa11.21□□□□□ -0.61
APOB-202ENST00000399256 SMIM12Q96EX1 92 aa11.21□□□□□ -0.61
APOB-202ENST00000399256 NDFIP1Q9BT67 221 aa11.21□□□□□ -0.61
APOB-202ENST00000399256 TPSG1Q9NRR2 321 aa11.21□□□□□ -0.61
APOB-202ENST00000399256 HSPB8Q9UJY1 196 aa11.21□□□□□ -0.61
APOB-202ENST00000399256 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.21□□□□□ -0.62
APOB-202ENST00000399256 hADV38S2A0JD32 116 aa11.21□□□□□ -0.62
APOB-202ENST00000399256 UQCRFS1P47985 274 aa11.21□□□□□ -0.62
APOB-202ENST00000399256 CCL11P51671 97 aa11.21□□□□□ -0.62
APOB-202ENST00000399256 C5orf17Q8NAS9 161 aa11.21□□□□□ -0.62
APOB-202ENST00000399256 ASCL2Q99929 193 aa11.21□□□□□ -0.62
APOB-202ENST00000399256 ZNF492Q9P255 531 aa11.21□□□□□ -0.62
APOB-202ENST00000399256 PPIAL4DF5H284 164 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 NCR2O95944 276 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 ZNF788Q6ZQV5 615 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 C2orf91Q6ZV80 131 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 STXBP6Q8NFX7 210 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 TMEM167AQ8TBQ9 72 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 MS4A6AQ9H2W1 248 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 DYSFO75923 2080 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 C7orf71A4D174 169 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 TCTAP57738 103 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 PEF1Q9UBV8 284 aaKnown RBP11.2□□□□□ -0.62
APOB-202ENST00000399256 PLXNB1O43157 2135 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 A0A1W2PPI3 338 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 APOHP02749 345 aaPredicted RBP11.2□□□□□ -0.62
APOB-202ENST00000399256 LINC01545Q5VT33 79 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 PRNTQ86SH4 94 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 ZCCHC24Q8N2G6 241 aaKnown RBP11.2□□□□□ -0.62
APOB-202ENST00000399256 OR5AN1Q8NGI8 311 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 LINC00574Q9H8X3 128 aa11.2□□□□□ -0.62
APOB-202ENST00000399256 CEP250Q9BV73 2442 aa11.19□□□□□ -0.62
APOB-202ENST00000399256 KLK10O43240 276 aa11.19□□□□□ -0.62
APOB-202ENST00000399256 SLC25A17O43808 307 aa11.19□□□□□ -0.62
APOB-202ENST00000399256 IGHV1-46P01743 117 aa11.19□□□□□ -0.62
APOB-202ENST00000399256 GP9P14770 177 aa11.19□□□□□ -0.62
APOB-202ENST00000399256 GLRXP35754 106 aa11.19□□□□□ -0.62
APOB-202ENST00000399256 BPIFA4PQ86YQ2 179 aa11.19□□□□□ -0.62
APOB-202ENST00000399256 GFRA4Q9GZZ7 299 aa11.19□□□□□ -0.62
APOB-202ENST00000399256 SAP30O75446 220 aa11.19□□□□□ -0.62
APOB-202ENST00000399256 COX8AP10176 69 aa11.19□□□□□ -0.62
APOB-202ENST00000399256 Q86TA4 180 aa11.19□□□□□ -0.62
APOB-202ENST00000399256 NEU4Q8WWR8 484 aaPredicted RBP11.19□□□□□ -0.62
APOB-202ENST00000399256 SARAFQ96BY9 339 aa11.19□□□□□ -0.62
APOB-202ENST00000399256 INS-IGF2F8WCM5 200 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 WT1P19544 449 aaPredicted RBP11.18□□□□□ -0.62
APOB-202ENST00000399256 FAM71F2Q6NXP2 309 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 OR4C13Q8NGP0 309 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 RITA1Q96K30 269 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 NHLH1Q02575 133 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 GOLT1AQ6ZVE7 132 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 EXOC3-AS1Q8N2X6 119 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 OR10X1Q8NGY0 326 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 NAA38Q9BRA0 125 aaKnown RBP11.18□□□□□ -0.62
APOB-202ENST00000399256 MEGF9Q9H1U4 602 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 DKK4Q9UBT3 224 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 CACNA1GO43497 2377 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 FAM231BA6NCW3 169 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 K7ERU9 68 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 HAX1O00165 279 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 ARMS2P0C7Q2 107 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 IGLC1P0CG04 106 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 GATA4P43694 442 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 SRSF6Q13247 344 aaKnown RBP11.18□□□□□ -0.62
APOB-202ENST00000399256 FDCSPQ8NFU4 85 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 CSTL1Q9H114 145 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 AP5S1Q9NUS5 200 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 LINC00312Q9Y6C7 94 aa11.18□□□□□ -0.62
APOB-202ENST00000399256 IGLV2-23P01705 113 aa11.17□□□□□ -0.62
APOB-202ENST00000399256 RIPPLY3P57055 190 aa11.17□□□□□ -0.62
APOB-202ENST00000399256 VSTM2AQ8TAG5 236 aa11.17□□□□□ -0.62
APOB-202ENST00000399256 GAGE10A6NGK3 116 aa11.17□□□□□ -0.62
APOB-202ENST00000399256 NPIPB6E9PJ23 425 aa11.17□□□□□ -0.62
APOB-202ENST00000399256 TMEM97Q5BJF2 176 aa11.17□□□□□ -0.62
APOB-202ENST00000399256 SRSF12Q8WXF0 261 aaKnown RBP11.17□□□□□ -0.62
APOB-202ENST00000399256 ZNF747Q9BV97 191 aa11.17□□□□□ -0.62
APOB-202ENST00000399256 TPPP3Q9BW30 176 aa11.17□□□□□ -0.62
APOB-202ENST00000399256 SMG1Q96Q15 3661 aaKnown RBP11.16□□□□□ -0.62
APOB-202ENST00000399256 IGLV3-9A0A075B6K5 115 aa11.16□□□□□ -0.62
APOB-202ENST00000399256 IGHV3-72A0A0B4J1Y9 119 aa11.16□□□□□ -0.62
APOB-202ENST00000399256 FAM106CPP0CH98 169 aa11.16□□□□□ -0.62
APOB-202ENST00000399256 FAM106AQ4KMX7 169 aa11.16□□□□□ -0.62
APOB-202ENST00000399256 IGF2-ASQ6U949 168 aa11.16□□□□□ -0.62
APOB-202ENST00000399256 OR8A1Q8NGG7 326 aa11.16□□□□□ -0.62
APOB-202ENST00000399256 NKX2-8O15522 239 aa11.16□□□□□ -0.62
APOB-202ENST00000399256 ENSAO43768 121 aaKnown RBP11.16□□□□□ -0.62
APOB-202ENST00000399256 CCL8P80075 99 aa11.16□□□□□ -0.62
APOB-202ENST00000399256 TMEM30BQ3MIR4 351 aa11.16□□□□□ -0.62
APOB-202ENST00000399256 FA2HQ7L5A8 372 aa11.16□□□□□ -0.62
APOB-202ENST00000399256 TMEM116Q8NCL8 245 aa11.16□□□□□ -0.62
APOB-202ENST00000399256 PRSS3P2Q8NHM4 247 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms