RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 HBDP02042 147 aa11.97□□□□□ -0.49
RPRD1A-202ENST00000399022 MGPP08493 103 aa11.97□□□□□ -0.49
RPRD1A-202ENST00000399022 ASCL5Q7RTU5 278 aa11.97□□□□□ -0.49
RPRD1A-202ENST00000399022 APOMO95445 188 aa11.97□□□□□ -0.49
RPRD1A-202ENST00000399022 SPACA3Q8IXA5 215 aa11.97□□□□□ -0.49
RPRD1A-202ENST00000399022 OR4C13Q8NGP0 309 aa11.97□□□□□ -0.49
RPRD1A-202ENST00000399022 TRBV20OR9-2A0A075B6H5 130 aa11.96□□□□□ -0.49
RPRD1A-202ENST00000399022 BSPH1Q075Z2 132 aa11.96□□□□□ -0.49
RPRD1A-202ENST00000399022 PSG3Q16557 428 aa11.96□□□□□ -0.49
RPRD1A-202ENST00000399022 SAA2-SAA4A0A096LPE2 208 aa11.96□□□□□ -0.5
RPRD1A-202ENST00000399022 SAA2P0DJI9 122 aaPredicted RBP11.96□□□□□ -0.5
RPRD1A-202ENST00000399022 MLANAQ16655 118 aa11.96□□□□□ -0.5
RPRD1A-202ENST00000399022 FAM71F2Q6NXP2 309 aa11.96□□□□□ -0.5
RPRD1A-202ENST00000399022 GAGE13Q4V321 117 aa11.95□□□□□ -0.5
RPRD1A-202ENST00000399022 CSTL1Q9H114 145 aa11.95□□□□□ -0.5
RPRD1A-202ENST00000399022 UPK2O00526 184 aa11.95□□□□□ -0.5
RPRD1A-202ENST00000399022 DKK1O94907 266 aa11.95□□□□□ -0.5
RPRD1A-202ENST00000399022 K7EN84 100 aa11.95□□□□□ -0.5
RPRD1A-202ENST00000399022 SAP30O75446 220 aa11.95□□□□□ -0.5
RPRD1A-202ENST00000399022 IGLV3-1P01715 115 aa11.95□□□□□ -0.5
RPRD1A-202ENST00000399022 SAA1P0DJI8 122 aaPredicted RBP11.95□□□□□ -0.5
RPRD1A-202ENST00000399022 DTX1Q86Y01 620 aa11.95□□□□□ -0.5
RPRD1A-202ENST00000399022 LAMA2P24043 3122 aaKnown RBP11.95□□□□□ -0.5
RPRD1A-202ENST00000399022 SSC4DQ8WTU2 575 aa11.95□□□□□ -0.5
RPRD1A-202ENST00000399022 COQ2Q96H96 371 aa11.95□□□□□ -0.5
RPRD1A-202ENST00000399022 CGB1A6NKQ9 187 aa11.94□□□□□ -0.5
RPRD1A-202ENST00000399022 PLA2G5P39877 138 aa11.94□□□□□ -0.5
RPRD1A-202ENST00000399022 ADAMTSL5Q6ZMM2 481 aa11.94□□□□□ -0.5
RPRD1A-202ENST00000399022 CD177Q8N6Q3 437 aa11.94□□□□□ -0.5
RPRD1A-202ENST00000399022 ANAPC13Q9BS18 74 aa11.94□□□□□ -0.5
RPRD1A-202ENST00000399022 MRPL20Q9BYC9 149 aaKnown RBP11.94□□□□□ -0.5
RPRD1A-202ENST00000399022 NPIPB11E5RHQ5 1161 aa11.94□□□□□ -0.5
RPRD1A-202ENST00000399022 MC5RP33032 325 aa11.94□□□□□ -0.5
RPRD1A-202ENST00000399022 VWC2Q2TAL6 325 aa11.94□□□□□ -0.5
RPRD1A-202ENST00000399022 UBTD1Q9HAC8 227 aa11.94□□□□□ -0.5
RPRD1A-202ENST00000399022 RANBP2P49792 3224 aaKnown RBP11.94□□□□□ -0.5
RPRD1A-202ENST00000399022 RNF138Q8WVD3 245 aa11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 CUL9Q8IWT3 2517 aa11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 GOSR1O95249 250 aa11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 FRMD6-AS1P0C7T7 363 aa11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 PRCDQ00LT1 54 aa11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 OR5AN1Q8NGI8 311 aa11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 OSR1Q8TAX0 266 aaPredicted RBP11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 PIEZO2Q9H5I5 2752 aa11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 MALRD1Q5VYJ5 2156 aa11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 SRRM5B3KS81 715 aa11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 LEPP41159 167 aa11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 CIARTQ8N365 385 aaPredicted RBP11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 SNCGO76070 127 aa11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 NDUFA3O95167 84 aa11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 EBLN2Q6P2I7 272 aa11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 TSSC4Q9Y5U2 329 aaPredicted RBP11.93□□□□□ -0.5
RPRD1A-202ENST00000399022 TRAV8-1A0A0A6YYK1 113 aa11.92□□□□□ -0.5
RPRD1A-202ENST00000399022 ERVK11-1P61568 191 aa11.92□□□□□ -0.5
RPRD1A-202ENST00000399022 FAM57AQ8TBR7 257 aa11.92□□□□□ -0.5
RPRD1A-202ENST00000399022 FAM90A9PA6NNJ1 464 aa11.92□□□□□ -0.5
RPRD1A-202ENST00000399022 LYNX1G3V0Z9 82 aa11.92□□□□□ -0.5
RPRD1A-202ENST00000399022 LYNX1P0DP58 116 aa11.92□□□□□ -0.5
RPRD1A-202ENST00000399022 BEX4Q9NWD9 120 aaPredicted RBP11.92□□□□□ -0.5
RPRD1A-202ENST00000399022 C9orf118A6NHY6 69 aa11.92□□□□□ -0.5
RPRD1A-202ENST00000399022 PLSCR4Q9NRQ2 329 aa11.92□□□□□ -0.5
RPRD1A-202ENST00000399022 IGHV3-35A0A0C4DH35 117 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 TCRBV4S1A1TA0A5B7 111 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 C17orf100A8MU93 164 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 GGTLC3B5MD39 225 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 RPS20P60866 119 aaKnown RBP11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 DEFB125Q8N687 156 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 CHD7Q9P2D1 2997 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 A0A1B0GW15 77 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 C10orf55Q5SWW7 151 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 GTSCR1Q86UQ5 136 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 FAM90A1Q86YD7 464 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 ETDBQ3ZM63 59 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 Q6AWC8 147 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 WDR86Q86TI4 376 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 TEX45Q8NA69 505 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 ZC2HC1AQ96GY0 325 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 S4R3C0 116 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 D6R8Y8 96 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 H3BRM9 83 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 ATP5LO75964 103 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 IGHV1-46P01743 117 aa11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 CENPVQ7Z7K6 275 aaPredicted RBP11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.91□□□□□ -0.5
RPRD1A-202ENST00000399022 IGKV3-7A0A075B6H7 116 aa11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 LOXL3P58215 753 aa11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 SMAD7O15105 426 aaKnown RBP11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 PRSS2P07478 247 aa11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 ECSCRQ19T08 205 aa11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 PSMG4Q5JS54 123 aa11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 RPRMLQ8N4K4 120 aa11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 OR4A5Q8NH83 315 aa11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 PTPRSQ13332 1948 aa11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 IGHV1-24A0A0C4DH33 117 aa11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 TEX29Q8N6K0 151 aa11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 MBNL3Q9NUK0 354 aaKnown RBP11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 RABAC1Q9UI14 185 aa11.9□□□□□ -0.5
RPRD1A-202ENST00000399022 NCR2O95944 276 aa11.89□□□□□ -0.51
RPRD1A-202ENST00000399022 EMP1P54849 157 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms