RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 TSC2P49815 1807 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 LILRA1O75019 489 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 IGHV3-11P01762 117 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 SRSF2Q01130 221 aaKnown RBP6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 ZFAND6Q6FIF0 208 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 DLX4Q92988 240 aaPredicted RBP6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 IGKV2-40A0A087WW87 121 aaPredicted RBP6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 B4DSR2 109 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 LEPROTO15243 131 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 IGKV2D-40P01614 121 aaPredicted RBP6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 C15orf32Q32M92 178 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 SPACA3Q8IXA5 215 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 TRAV5A0A0B4J249 113 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 EVI2AP22794 236 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 TMEM95Q3KNT9 176 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 TRPT1Q86TN4 253 aaKnown RBP6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 CKS1BP61024 79 aa6.84□□□□□ -1.32
SPTLC3-201ENST00000399002 SYS1-DBNDD2H3BUS1 97 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 SCRT1Q9BWW7 348 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 ERCC8Q13216 396 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 SIGLEC9Q9Y336 463 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 MUC21A0A0G2JKD1 596 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 MUC21A0A140T8X8 626 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 C15orf62A8K5M9 175 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 PRSS46E5RG02 174 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 RNASE2P10153 161 aaKnown RBP6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 YPEL3P61236 119 aaPredicted RBP6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 ZNF474Q6S9Z5 364 aaPredicted RBP6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 GLRX5Q86SX6 157 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 ZCCHC24Q8N2G6 241 aaKnown RBP6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 FAM110DQ8TAY7 271 aaPredicted RBP6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 SCN8AQ9UQD0 1980 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 THSD7BQ9C0I4 1608 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 GAGE2EQ4V326 116 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 LCN12Q6JVE5 192 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 GAGE2DQ9UEU5 116 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 TMEM8BA6NDV4 472 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 PMS2P5A8MQ11 134 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 CD5LO43866 347 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 ESDP10768 282 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 GATA4P43694 442 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 TMEM14CQ9P0S9 112 aa6.83□□□□□ -1.32
SPTLC3-201ENST00000399002 TRAV40A0A0B4J280 105 aa6.82□□□□□ -1.32
SPTLC3-201ENST00000399002 ZNF562Q6V9R5 426 aa6.82□□□□□ -1.32
SPTLC3-201ENST00000399002 ZNF833PQ6ZTB9 187 aa6.82□□□□□ -1.32
SPTLC3-201ENST00000399002 LINC01356Q8N9X3 169 aa6.82□□□□□ -1.32
SPTLC3-201ENST00000399002 SCN3AQ9NY46 2000 aa6.82□□□□□ -1.32
SPTLC3-201ENST00000399002 LMO1P25800 156 aa6.82□□□□□ -1.32
SPTLC3-201ENST00000399002 LINC00158P58513 81 aa6.82□□□□□ -1.32
SPTLC3-201ENST00000399002 Q0VFX4 171 aa6.82□□□□□ -1.32
SPTLC3-201ENST00000399002 RPP25LQ8N5L8 163 aaKnown RBP6.82□□□□□ -1.32
SPTLC3-201ENST00000399002 CHAC1Q9BUX1 264 aa6.82□□□□□ -1.32
SPTLC3-201ENST00000399002 GLMPQ8WWB7 406 aa6.82□□□□□ -1.32
SPTLC3-201ENST00000399002 A0A087WV48 116 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 RHODO00212 210 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 NTF4P34130 210 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 CHCHD5Q9BSY4 110 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 GOLGA4Q13439 2230 aaKnown RBP6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 SBF1O95248 1867 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 DLEU1O43261 78 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 IL17RELQ6ZVW7 336 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 OR11H6Q8NGC7 330 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 SPANXCQ9NY87 97 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 IGKV1D-17A0A075B6S4 117 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 NPIPB5A8MRT5 1133 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 PSPNO60542 156 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 MMP23AO75900 390 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 TDGF1P3P51864 188 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 FAM231DQ6ZW35 169 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 LINC00311Q8N616 119 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 GUSBP1Q15486 140 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 BCL6BQ8N143 479 aaPredicted RBP6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 SS18Q15532 418 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 CSTL1Q9H114 145 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 MEGF9Q9H1U4 602 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 TMEM14BQ9NUH8 114 aa6.81□□□□□ -1.32
SPTLC3-201ENST00000399002 A0A0G2JNJ9 132 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 A0A1W2PRX2 142 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 CD300EQ496F6 205 aaPredicted RBP6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 C10orf91Q5T1B1 145 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 Q8N8P6 123 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 Q9UFV3 132 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 E9PQ18 207 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 GAGE2BQ13066 116 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 EXOC3-AS1Q8N2X6 119 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 LY6G5BQ8NDX9 201 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 DAZ1Q9NQZ3 744 aaKnown RBP6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 LINC00473A8K010 186 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 UBE2V1Q13404 147 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 BMPERQ8N8U9 685 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 C20orf144Q9BQM9 153 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 TIMM21Q9BVV7 248 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 PRDM6Q9NQX0 595 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 KLF12Q9Y4X4 402 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 C3orf79P0CE67 100 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 HAPLN4Q86UW8 402 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 C8orf31Q8N9H6 132 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 PRTN3P24158 256 aa6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 RPL15P61313 204 aaKnown RBP6.8□□□□□ -1.32
SPTLC3-201ENST00000399002 ZNF124Q15973 351 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms