RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 FBLN7Q53RD9 439 aa10.95□□□□□ -0.66
PRAME-202ENST00000398743 RASL11AQ6T310 242 aa10.95□□□□□ -0.66
PRAME-202ENST00000398743 TMEM68Q96MH6 324 aa10.95□□□□□ -0.66
PRAME-202ENST00000398743 ATRXP46100 2492 aa10.95□□□□□ -0.66
PRAME-202ENST00000398743 ABCA4P78363 2273 aa10.95□□□□□ -0.66
PRAME-202ENST00000398743 ZFP36P26651 326 aaKnown RBP10.94□□□□□ -0.66
PRAME-202ENST00000398743 MINOS1Q5TGZ0 78 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 ZNF562Q6V9R5 426 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 ZNF664Q8N3J9 261 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 MLST8Q9BVC4 326 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 OTORQ9NRC9 128 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 MINOS1-NBL1R4GNA1 71 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 NPIPB5A8MRT5 1133 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 SCGB1D1O95968 90 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 LTAP01374 205 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 HOXB4P17483 251 aaPredicted RBP10.94□□□□□ -0.66
PRAME-202ENST00000398743 OR10J3Q5JRS4 329 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 NUP35Q8NFH5 326 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 WIPF2Q8TF74 440 aaPredicted RBP10.94□□□□□ -0.66
PRAME-202ENST00000398743 TSKUQ8WUA8 353 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 ARPC1AQ92747 370 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 UBTD1Q9HAC8 227 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 GNB4Q9HAV0 340 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 ZNF586Q9NXT0 402 aa10.94□□□□□ -0.66
PRAME-202ENST00000398743 A6NNC1 897 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 NCBP2LA6PVI3 153 aaKnown RBP10.93□□□□□ -0.66
PRAME-202ENST00000398743 F2Z2F3 143 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 NDUFS7O75251 213 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 PAX1P15863 534 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 KIAA1644Q3SXP7 199 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 KLF17Q5JT82 389 aaPredicted RBP10.93□□□□□ -0.66
PRAME-202ENST00000398743 BPIFA4PQ86YQ2 179 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 DYNAPQ8N1N2 210 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 NOL4LQ96MY1 436 aaPredicted RBP10.93□□□□□ -0.66
PRAME-202ENST00000398743 SHANK2-AS3Q9BTD1 123 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 BMPR1BO00238 502 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 APCSP02743 223 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 RNF125Q96EQ8 232 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 NEU1Q99519 415 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 SAMD10Q9BYL1 202 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 PRORYQ9H606 182 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 RNF24Q9Y225 148 aa10.93□□□□□ -0.66
PRAME-202ENST00000398743 IGLV11-55A0A075B6I3 123 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 TRAV30A0A087WSZ9 112 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 HIGD1CA8MV81 97 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 H3BRN7 92 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 GNG7O60262 68 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 IL4P05112 153 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 SRIP30626 198 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 BRS3P32247 399 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 Q8N6K4 173 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 ZNF491Q8N8L2 437 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 OR4F17Q8NGA8 305 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 TMEM190Q8WZ59 177 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 C14orf144Q96I85 54 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 NAGKQ9UJ70 344 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 EFNA4P52798 201 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 EBI3Q14213 229 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 EXOC3-AS1Q8N2X6 119 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 FANCD2OSQ96PS1 177 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 SIRPDQ9H106 197 aa10.92□□□□□ -0.66
PRAME-202ENST00000398743 RPP21Q9H633 154 aaKnown RBP10.92□□□□□ -0.66
PRAME-202ENST00000398743 ZNF253O75346 499 aa10.91□□□□□ -0.66
PRAME-202ENST00000398743 TMEM11P17152 192 aa10.91□□□□□ -0.66
PRAME-202ENST00000398743 NDPQ00604 133 aa10.91□□□□□ -0.66
PRAME-202ENST00000398743 SLAQ13239 276 aa10.91□□□□□ -0.66
PRAME-202ENST00000398743 CT83Q5H943 113 aa10.91□□□□□ -0.66
PRAME-202ENST00000398743 Q6ZWC4 215 aa10.91□□□□□ -0.66
PRAME-202ENST00000398743 S100A7AQ86SG5 101 aa10.91□□□□□ -0.66
PRAME-202ENST00000398743 TTC9CQ8N5M4 171 aa10.91□□□□□ -0.66
PRAME-202ENST00000398743 LINC00469Q8N7U9 141 aa10.91□□□□□ -0.66
PRAME-202ENST00000398743 ZNF48Q96MX3 618 aaPredicted RBP10.91□□□□□ -0.66
PRAME-202ENST00000398743 ZNF492Q9P255 531 aa10.91□□□□□ -0.66
PRAME-202ENST00000398743 NBASA2RRP1 2371 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 TRBV19A0A075B6N1 114 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 A8MWP6 167 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 P01737 135 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 MFAP4P55083 255 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 LINC00322Q6ZN03 302 aaPredicted RBP10.9□□□□□ -0.66
PRAME-202ENST00000398743 REC114Q7Z4M0 266 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 ATP5L2Q7Z4Y8 100 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 Q86TA4 180 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 ITLN2Q8WWU7 325 aaPredicted RBP10.9□□□□□ -0.66
PRAME-202ENST00000398743 HSPB9Q9BQS6 159 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 PRSS22Q9GZN4 317 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 THYN1Q9P016 225 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 S4R3C0 116 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 IGHV2-70DA0A0C4DH43 119 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 WI2-2373I1.2A0A1W2PRP0 233 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 C19orf71A6NCJ1 209 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 TOX4O94842 621 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 IGLC2P0DOY2 106 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 UNQ6494/PRO21346Q6UXR6 183 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 DAZAP1Q96EP5 407 aaKnown RBP10.9□□□□□ -0.66
PRAME-202ENST00000398743 KCNS1Q96KK3 526 aa10.9□□□□□ -0.66
PRAME-202ENST00000398743 TBL2Q9Y4P3 447 aaKnown RBP10.9□□□□□ -0.66
PRAME-202ENST00000398743 TRAV8-1A0A0A6YYK1 113 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 A8MWL6 223 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 HLA-DRB1P01911 266 aa10.89□□□□□ -0.67
PRAME-202ENST00000398743 GOLT1AQ6ZVE7 132 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms