RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 IGKV1D-39P04432 117 aa11.57□□□□□ -0.56
PCDHGA11-201ENST00000398587 BEND2Q8NDZ0 799 aa11.57□□□□□ -0.56
PCDHGA11-201ENST00000398587 NRN1Q9NPD7 142 aa11.57□□□□□ -0.56
PCDHGA11-201ENST00000398587 TMEM14BQ9NUH8 114 aa11.57□□□□□ -0.56
PCDHGA11-201ENST00000398587 NPFFO15130 113 aa11.57□□□□□ -0.56
PCDHGA11-201ENST00000398587 PF4P02776 101 aa11.57□□□□□ -0.56
PCDHGA11-201ENST00000398587 IGFL2Q6UWQ7 119 aa11.57□□□□□ -0.56
PCDHGA11-201ENST00000398587 SSBP4Q9BWG4 385 aaPredicted RBP11.57□□□□□ -0.56
PCDHGA11-201ENST00000398587 NUDT10Q8NFP7 164 aa11.57□□□□□ -0.56
PCDHGA11-201ENST00000398587 NUDT11Q96G61 164 aa11.57□□□□□ -0.56
PCDHGA11-201ENST00000398587 PRDM13Q9H4Q3 707 aa11.57□□□□□ -0.56
PCDHGA11-201ENST00000398587 ATP5L2Q7Z4Y8 100 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 GSN-AS1Q9NRJ2 163 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 PEMTQ9UBM1 199 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 TCRAP04437 139 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 WT1P19544 449 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 C19orf54Q5BKX5 351 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 TEX36Q5VZQ5 186 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 TMEM219Q86XT9 240 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 C18orf15Q96N68 181 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 BPESC1Q9GZL8 116 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 CA1P00915 261 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 ADCYAP1P18509 176 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 VDAC2P45880 294 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 C17orf58Q2M2W7 97 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 ZMAT5Q9UDW3 170 aaKnown RBP11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 PTPRQQ9UMZ3 2332 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 GCSHP23434 173 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 UQCRFS1P47985 274 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 MLANAQ16655 118 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 FAM90A2PQ658T7 463 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 Q6ZSR3 168 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 PRSS33Q8NF86 280 aa11.56□□□□□ -0.56
PCDHGA11-201ENST00000398587 A0A1W2PPI3 338 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 C15orf65H3BRN8 121 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 PSMG4Q5JS54 123 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 ZNRD1Q9P1U0 126 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 OBSL1O75147 1896 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 TRAV21A0A0B4J279 112 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 RNASE4P34096 147 aaKnown RBP11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 CYB5R2Q6BCY4 276 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 ERASQ7Z444 233 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 CACNA1AO00555 2505 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 OR11H12B2RN74 326 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 UBE2L6O14933 153 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 IGF2-ASQ6U949 168 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 EXOC3-AS1Q8N2X6 119 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 OR11H1Q8NG94 326 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 OR5AN1Q8NGI8 311 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 OR11H2Q8NH07 326 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 SSC4DQ8WTU2 575 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 H3BUX3 64 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 PPBPP02775 128 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 LOXP28300 417 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 YAE1D1Q9NRH1 226 aa11.55□□□□□ -0.56
PCDHGA11-201ENST00000398587 COL4A3Q01955 1670 aa11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 ANKHD1Q8IWZ3 2542 aaKnown RBP11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 LHFPL4Q7Z7J7 247 aa11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 IL15RAQ13261 267 aa11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 LYPD6Q86Y78 171 aa11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 LINC00311Q8N616 119 aa11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 ITLN2Q8WWU7 325 aaPredicted RBP11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 HIST1H4GQ99525 98 aa11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 MIEN1Q9BRT3 115 aa11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 FREM1Q5H8C1 2179 aa11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 MED13Q9UHV7 2174 aa11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 OVOL1O14753 267 aa11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 DUSP14O95147 198 aaKnown RBP11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 SPRY4Q9C004 299 aa11.54□□□□□ -0.56
PCDHGA11-201ENST00000398587 OR10J3Q5JRS4 329 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 DUX4L9Q6RFH8 374 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 BRD3OSQ6XYD6 125 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 ZNF833PQ6ZTB9 187 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 KIR3DL3Q8N743 410 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 C9JQL5 133 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 HIST1H2BLQ99880 126 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 COL4A4P53420 1690 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 ZNF106Q9H2Y7 1883 aaKnown RBP11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 LGALS3P17931 250 aaKnown RBP11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 RPL15P61313 204 aaKnown RBP11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 CTAG1AP78358 180 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 ZNF562Q6V9R5 426 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 SIGLEC15Q6ZMC9 328 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 LYPD1Q8N2G4 141 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 NDUFA4L2Q9NRX3 87 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 TMEM160Q9NX00 188 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 JOSD1Q15040 202 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 DUX3Q96PT4 197 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 TNFRSF18Q9Y5U5 241 aa11.53□□□□□ -0.56
PCDHGA11-201ENST00000398587 GAGE10A6NGK3 116 aa11.52□□□□□ -0.56
PCDHGA11-201ENST00000398587 F2Z2F3 143 aa11.52□□□□□ -0.56
PCDHGA11-201ENST00000398587 SAA4P35542 130 aa11.52□□□□□ -0.56
PCDHGA11-201ENST00000398587 HIST3H2BBQ8N257 126 aa11.52□□□□□ -0.56
PCDHGA11-201ENST00000398587 NCOA6Q14686 2063 aaPredicted RBP11.52□□□□□ -0.56
PCDHGA11-201ENST00000398587 NPIPB5A8MRT5 1133 aa11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 LINC00614P0C842 121 aa11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 FABP2P12104 132 aa11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 DNLZQ5SXM8 178 aa11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 GLMPQ8WWB7 406 aa11.52□□□□□ -0.57
PCDHGA11-201ENST00000398587 RAB37Q96AX2 223 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms