RNA–Protein interactions for RNA: ENST00000398225.7

PDE9A-208, Transcript of phosphodiesterase 9A, human

TSL 1 (best) BASIC

Gene PDE9A, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE9A-208	ENST00000398225	IGHG4	P01861	327 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	PF4V1	P10720	104 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	ELL	P55199	621 aa	Predicted RBP	11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	TNFRSF9	Q07011	255 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	SLC38A11	Q08AI6	406 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	BSX	Q3C1V8	233 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	COA6	Q5JTJ3	125 aa	Known RBP	11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	OR5B12	Q96R08	314 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	PLEKHA3	Q9HB20	300 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	HSPB7	Q9UBY9	170 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	ZNF580	Q9UK33	172 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225		A0A1B0GV90	55 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	IGLV1-40	P01703	118 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	RPLP1	P05386	114 aa	Known RBP	11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	SPCS3	P61009	180 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	SPANXN5	Q5MJ07	72 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	TEX38	Q6PEX7	206 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	TTC9C	Q8N5M4	171 aa		11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.45	□□□□□ -0.58
PDE9A-208	ENST00000398225	TMEM250	H0YL14	139 aa		11.44	□□□□□ -0.58
PDE9A-208	ENST00000398225		H7BYZ3	331 aa		11.44	□□□□□ -0.58
PDE9A-208	ENST00000398225	AMBP	P02760	352 aa		11.44	□□□□□ -0.58
PDE9A-208	ENST00000398225	PSMB8	P28062	276 aa		11.44	□□□□□ -0.58
PDE9A-208	ENST00000398225	PSMB3	P49720	205 aa		11.44	□□□□□ -0.58
PDE9A-208	ENST00000398225	MEF2B	Q02080	365 aa	Predicted RBP	11.44	□□□□□ -0.58
PDE9A-208	ENST00000398225	C12orf54	Q6X4T0	127 aa		11.44	□□□□□ -0.58
PDE9A-208	ENST00000398225	OR52E5	Q8NH55	327 aa		11.44	□□□□□ -0.58
PDE9A-208	ENST00000398225	CITED2	Q99967	270 aa	Predicted RBP	11.44	□□□□□ -0.58
PDE9A-208	ENST00000398225	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.44	□□□□□ -0.58
PDE9A-208	ENST00000398225	UBE2L5P	A0A1B0GUS4	154 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	GALR1	P47211	349 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	RPL23	P62829	140 aa	Known RBP	11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	ATP6V1F	Q16864	119 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	LBH	Q53QV2	105 aa	Predicted RBP	11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	TMEM14EP	Q6UXP3	125 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	ACY3	Q96HD9	319 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	TMEM68	Q96MH6	324 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	VWF	P04275	2813 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	CTXND1	A0A1B0GTU2	59 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	NPIPB5	A8MRT5	1133 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	MB	P02144	154 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	CRYGC	P07315	174 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	GZMB	P10144	247 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	DEFA4	P12838	97 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	RAB9A	P51151	201 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	MFAP2	P55001	183 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	TAS2R60	P59551	318 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	KHDC1L	Q5JSQ8	128 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	C18orf65	Q6ZTR6	163 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	RPP25L	Q8N5L8	163 aa	Known RBP	11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	C3orf56	Q8N813	242 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	OR4X2	Q8NGF9	303 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	OR51G1	Q8NGK1	321 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225	ANAPC16	Q96DE5	110 aa		11.43	□□□□□ -0.58
PDE9A-208	ENST00000398225		A0A1W2PRX2	142 aa		11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	XKRY2	A2RUG3	117 aa		11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	PPP5D1	E7EU14	171 aa		11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	GCG	P01275	180 aa		11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	TPPP2	P59282	170 aa		11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	DTD1	Q8TEA8	209 aa		11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	TMEM170A	Q8WVE7	144 aa		11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	RPUSD4	Q96CM3	377 aa	Known RBP	11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	FANCD2OS	Q96PS1	177 aa		11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	SRSF8	Q9BRL6	282 aa	Known RBP	11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	C2orf88	Q9BSF0	95 aa		11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	ENY2	Q9NPA8	101 aa		11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	HEYL	Q9NQ87	328 aa	Predicted RBP	11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	MANBAL	Q9NQG1	85 aa		11.42	□□□□□ -0.58
PDE9A-208	ENST00000398225	OR2J3	O76001	311 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	TRGV3	P03979	118 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	FAM3B	P58499	235 aa	Predicted RBP	11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	ERH	P84090	104 aa	Known RBP	11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	FOXE3	Q13461	319 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	NECAP1	Q8NC96	275 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	RAB24	Q969Q5	203 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	CITED1	Q99966	193 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	TMEM147	Q9BVK8	224 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225		S4R3C0	116 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	WNK1	Q9H4A3	2382 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	TCRBV4S1A1T	A0A5B7	111 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	ELANE	P08246	267 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	OR8G2P	Q6IF36	304 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	ACSM6	Q6P461	480 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	PARL	Q9H300	379 aa		11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	F11R	Q9Y624	299 aa	Known RBP	11.41	□□□□□ -0.58
PDE9A-208	ENST00000398225	CMYA5	Q8N3K9	4069 aa		11.4	□□□□□ -0.58
PDE9A-208	ENST00000398225	IGHV3-21	A0A0B4J1V1	117 aa		11.4	□□□□□ -0.58
PDE9A-208	ENST00000398225	IGHV3-11	P01762	117 aa		11.4	□□□□□ -0.58
PDE9A-208	ENST00000398225	OR10G9	Q8NGN4	311 aa		11.4	□□□□□ -0.58
PDE9A-208	ENST00000398225	OR10G7	Q8NGN6	311 aa		11.4	□□□□□ -0.58
PDE9A-208	ENST00000398225	TRBV9	A0A0B4J1U6	114 aa		11.39	□□□□□ -0.59
PDE9A-208	ENST00000398225		A8MWP6	167 aa		11.39	□□□□□ -0.59
PDE9A-208	ENST00000398225	GGCT	O75223	188 aa	Known RBP	11.39	□□□□□ -0.59
PDE9A-208	ENST00000398225	TYMS	P04818	313 aa		11.39	□□□□□ -0.59
PDE9A-208	ENST00000398225	RNASE2	P10153	161 aa	Known RBP	11.39	□□□□□ -0.59
PDE9A-208	ENST00000398225	RHOG	P84095	191 aa		11.39	□□□□□ -0.59
PDE9A-208	ENST00000398225	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.39	□□□□□ -0.59
PDE9A-208	ENST00000398225	NSUN5P1	Q3KNT7	163 aa		11.39	□□□□□ -0.59
PDE9A-208	ENST00000398225	ACTL10	Q5JWF8	245 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms