RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 IGKV3-20P01619 116 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 TAS2R60P59551 318 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 RPP25LQ8N5L8 163 aaKnown RBP6.58□□□□□ -1.36
PTPRD-204ENST00000397606 NAV3Q8IVL0 2385 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 IGLC7A0M8Q6 106 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 ISLRO14498 428 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 RPL35P42766 123 aaKnown RBP6.58□□□□□ -1.36
PTPRD-204ENST00000397606 ATP5G3P48201 142 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 ST6GALNAC6Q969X2 333 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 ATG101Q9BSB4 218 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 SCRT1Q9BWW7 348 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 VSIRQ9H7M9 311 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 IGHV3OR16-12A0A075B7B8 117 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 TRAV1-1A0A0B4J248 108 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 FAM159AQ6UWV7 190 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 SYT8Q8NBV8 401 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 SEPSECSQ9HD40 501 aaKnown RBP6.58□□□□□ -1.36
PTPRD-204ENST00000397606 FASNP49327 2511 aaKnown RBP6.58□□□□□ -1.36
PTPRD-204ENST00000397606 ODF3BA8MYP8 253 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 MFAP2P55001 183 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 RPL15P61313 204 aaKnown RBP6.57□□□□□ -1.36
PTPRD-204ENST00000397606 IL15RAQ13261 267 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 IGHV7-81A0A0B4J1V7 117 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 PMS2P5A8MQ11 134 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 ZNF705FA8MVS1 300 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-204ENST00000397606 ZNF705DP0CH99 300 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-204ENST00000397606 ZNF705BP0CI00 300 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-204ENST00000397606 FA2HQ7L5A8 372 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 Q8N9W7 124 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 NHLRC2Q8NBF2 726 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 OR1N2Q8NGR9 330 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 TRAV5A0A0B4J249 113 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 LINC01619G3V211 115 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 SYNJ2BPP57105 145 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 RRN3P1Q2M238 152 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 AARDQ4LEZ3 155 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 MRPL54Q6P161 138 aaKnown RBP6.57□□□□□ -1.36
PTPRD-204ENST00000397606 RHPN1-AS1Q9BWJ2 59 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 EPDR1Q9UM22 224 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 A0A1B0GUS0 222 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 SCO2A0A1W2PP80 73 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 OVOL1O14753 267 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 SRP19P09132 144 aaKnown RBP6.57□□□□□ -1.36
PTPRD-204ENST00000397606 RNF212Q495C1 297 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 C9orf139Q6ZV77 190 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 GTSCR1Q86UQ5 136 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 TMEM86BQ8N661 226 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 TMEM37Q8WXS4 190 aa6.57□□□□□ -1.36
PTPRD-204ENST00000397606 TRAV34A0A0B4J273 112 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 IGLV2-14P01704 120 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 PRDM13Q9H4Q3 707 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 CD5LO43866 347 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 HSBP1O75506 76 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 RAB5AP20339 215 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 Q6ZPA2 131 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 STHQ8IWL8 128 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 C5orf56Q8N8D9 126 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 ISOC2Q96AB3 205 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 GPR61Q9BZJ8 451 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 NDUFA4O00483 81 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 NDUFA3O95167 84 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 BLCAPP62952 87 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 SHANK2-AS3Q9BTD1 123 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 PHLDA3Q9Y5J5 127 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 DOCK11Q5JSL3 2073 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 NTF3P20783 257 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 CIARTQ8N365 385 aaPredicted RBP6.56□□□□□ -1.36
PTPRD-204ENST00000397606 PCSK5Q92824 1860 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 MBD6Q96DN6 1003 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 C5orf30Q96GV9 206 aa6.56□□□□□ -1.36
PTPRD-204ENST00000397606 A0A1W2PPR1 153 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 CD33P20138 364 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 CCL20P78556 96 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 NDPQ00604 133 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 SPATA31B1PQ5VZV4 182 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 LYPD1Q8N2G4 141 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 PRSS3P2Q8NHM4 247 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 IGFBPL1Q8WX77 278 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 ZNF292O60281 2723 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 SRD5A3Q9H8P0 318 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 ZFP30Q9Y2G7 519 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 PSMG4Q5JS54 123 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 TOMM20LQ6UXN7 152 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 ZNF114Q8NC26 417 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 SFRP2Q96HF1 295 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 RITA1Q96K30 269 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 MEGF9Q9H1U4 602 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 FOXE3Q13461 319 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 TWIST1Q15672 202 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 C1orf194Q5T5A4 169 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 CBLN2Q8IUK8 224 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 ASCL2Q99929 193 aa6.55□□□□□ -1.36
PTPRD-204ENST00000397606 DOPEY1Q5JWR5 2465 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 IGLV2-23P01705 113 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 MGPP08493 103 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 IGLC1P0CG04 106 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 LEPP41159 167 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 IER3P46695 156 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 FOXL1Q12952 345 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 OR11H1Q8NG94 326 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms