RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TMEM229BQ8NBD8 167 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 SLC24A4Q8NFF2 622 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 OR13C8Q8NGS7 320 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 OR52I2Q8NH67 350 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 MARCH1Q8TCQ1 289 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 TMEM170AQ8WVE7 144 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 RBPMSQ93062 196 aaKnown RBP6.21□□□□□ -1.42
CAPN3-208ENST00000397204 GPR146Q96CH1 333 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 ACY3Q96HD9 319 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 LINC00052Q96N35 136 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 KRTAP4-5Q9BYR2 181 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 SAV1Q9H4B6 383 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-208ENST00000397204 GOLT1BQ9Y3E0 138 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 U3KQ87 197 aa6.21□□□□□ -1.42
CAPN3-208ENST00000397204 A0A087WXM4 84 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 CDK2AP2O75956 126 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 RAB3DO95716 219 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 HBE1P02100 147 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 PSMB3P49720 205 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 PAX9P55771 341 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 ATP5IP56385 69 aaPredicted RBP6.2□□□□□ -1.42
CAPN3-208ENST00000397204 FXYD7P58549 80 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 TAS2R19P59542 299 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 ZNF79Q15937 498 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 NMSQ5H8A3 153 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 GDF5OSQ5U4N7 250 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 STEAP1BQ6NZ63 245 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 ZNF575Q86XF7 245 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 ZNF709Q8N972 641 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 C15orf53Q8NAA6 179 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 OR4B1Q8NGF8 309 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 RNF125Q96EQ8 232 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 RTBDNQ9BSG5 229 aaPredicted RBP6.2□□□□□ -1.42
CAPN3-208ENST00000397204 CACNG5Q9UF02 275 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 C14orf166Q9Y224 244 aaKnown RBP6.2□□□□□ -1.42
CAPN3-208ENST00000397204 TMED3Q9Y3Q3 217 aa6.2□□□□□ -1.42
CAPN3-208ENST00000397204 APOBP04114 4563 aaKnown RBP6.2□□□□□ -1.42
CAPN3-208ENST00000397204 LOC102723971A0A1B0GUV8 181 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 SNRPGP15A8MWD9 76 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 FAM25AB3EWG3 89 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 FAM25CB3EWG5 89 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 FAM25GB3EWG6 89 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 ISLRO14498 428 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 TNFAIP8O95379 198 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 FABP1P07148 127 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 OR5AC1P0C628 307 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 HTN3P15516 51 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 GPX4P36969 197 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-208ENST00000397204 VBP1P61758 197 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 DAD1P61803 113 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 SUMO1P63165 101 aaKnown RBP6.19□□□□□ -1.42
CAPN3-208ENST00000397204 SSBP1Q04837 148 aaKnown RBP6.19□□□□□ -1.42
CAPN3-208ENST00000397204 SURF2Q15527 256 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-208ENST00000397204 RRN3P1Q2M238 152 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 SCGB2B2Q4G0G5 96 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 FAM78BQ5VT40 261 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 SAMD13Q5VXD3 122 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 EBLN2Q6P2I7 272 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 GSG1LQ6UXU4 331 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 C1orf158Q8N1D5 194 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 OR4D10Q8NGI6 311 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 COQ8AQ8NI60 647 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 LHFPL5Q8TAF8 219 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 C7orf50Q9BRJ6 194 aaKnown RBP6.19□□□□□ -1.42
CAPN3-208ENST00000397204 PBDC1Q9BVG4 233 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 WDR12Q9GZL7 423 aaKnown RBP6.19□□□□□ -1.42
CAPN3-208ENST00000397204 NAA60Q9H7X0 242 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 KCNIP3Q9Y2W7 256 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 YTHDF2Q9Y5A9 579 aaKnown RBP6.19□□□□□ -1.42
CAPN3-208ENST00000397204 TMEM56-RWDD3S4R434 201 aa6.19□□□□□ -1.42
CAPN3-208ENST00000397204 HERC1Q15751 4861 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 A0A0J9YX75 114 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 SOCS3O14543 225 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 SULT1A3P0DMM9 295 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 SULT1A4P0DMN0 295 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 ALDH3B2P48448 385 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 DEFB1P60022 68 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 NCS1P62166 190 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 SUPT4H1P63272 117 aaKnown RBP6.18□□□□□ -1.42
CAPN3-208ENST00000397204 GAMTQ14353 236 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 MEF2DQ14814 521 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 RNASE12Q5GAN4 147 aaKnown RBP6.18□□□□□ -1.42
CAPN3-208ENST00000397204 GPR107Q5VW38 600 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 TMEM268Q5VZI3 342 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 TMEM88Q6PEY1 159 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 LGI3Q8N145 548 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 AP3S1Q92572 193 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 IL22RA2Q969J5 263 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 ATG101Q9BSB4 218 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 FUNDC2Q9BWH2 189 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 MAGT1Q9H0U3 335 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 SLC35B3Q9H1N7 401 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 RPRMQ9NS64 109 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 EXTL2Q9UBQ6 330 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 GPR132Q9UNW8 380 aa6.18□□□□□ -1.42
CAPN3-208ENST00000397204 CRYM-AS1A6NIL9 109 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 ZFP92A6NM28 416 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 LYRM9A8MSI8 78 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 C16orf90A8MZG2 172 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 DISC1C4P0D8 188 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms