RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 LYPD6BQ8NI32 183 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 WIPF2Q8TF74 440 aaPredicted RBP10.2□□□□□ -0.78
SEC13-209ENST00000397117 PFDN5Q99471 154 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 CHRDL1Q9BU40 450 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 DNAJC4Q9NNZ3 241 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 DOK5Q9P104 306 aa10.2□□□□□ -0.78
SEC13-209ENST00000397117 KRBOX1C9JBD0 128 aa10.19□□□□□ -0.78
SEC13-209ENST00000397117 PPP5D1E7EU14 171 aa10.19□□□□□ -0.78
SEC13-209ENST00000397117 TEX46H3BTG2 121 aa10.19□□□□□ -0.78
SEC13-209ENST00000397117 HYPMO75409 117 aa10.19□□□□□ -0.78
SEC13-209ENST00000397117 H2AFB1P0C5Y9 115 aa10.19□□□□□ -0.78
SEC13-209ENST00000397117 CD28P10747 220 aa10.19□□□□□ -0.78
SEC13-209ENST00000397117 ADMP35318 185 aa10.19□□□□□ -0.78
SEC13-209ENST00000397117 CDC34P49427 236 aaPredicted RBP10.19□□□□□ -0.78
SEC13-209ENST00000397117 RHOBP62745 196 aa10.19□□□□□ -0.78
SEC13-209ENST00000397117 RELQ04864 619 aaPredicted RBP10.19□□□□□ -0.78
SEC13-209ENST00000397117 C10orf113Q5VZT2 155 aa10.19□□□□□ -0.78
SEC13-209ENST00000397117 SFT2D1Q8WV19 159 aa10.19□□□□□ -0.78
SEC13-209ENST00000397117 RCC1LQ96I51 464 aaKnown RBP10.19□□□□□ -0.78
SEC13-209ENST00000397117 PBDC1Q9BVG4 233 aa10.19□□□□□ -0.78
SEC13-209ENST00000397117 SLC25A22Q9H936 323 aa10.19□□□□□ -0.78
SEC13-209ENST00000397117 ELOA3CA0A087WX78 387 aaPredicted RBP10.18□□□□□ -0.78
SEC13-209ENST00000397117 CTXND1A0A1B0GTU2 59 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 IL4P05112 153 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 OR5G3P0C626 314 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 KHDC1LQ5JSQ8 128 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 ZNF600Q6ZNG1 722 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 NDUFA11Q86Y39 141 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 GATAD1Q8WUU5 269 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 UBE2E2Q96LR5 201 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 OR5B12Q96R08 314 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 RNF2Q99496 336 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 HRH4Q9H3N8 390 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 IGHV3-35A0A0C4DH35 117 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 SEC14L6B5MCN3 397 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 KIAA0141Q14154 515 aaPredicted RBP10.18□□□□□ -0.78
SEC13-209ENST00000397117 FAM78BQ5VT40 261 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 LCN15Q6UWW0 184 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 S100A7AQ86SG5 101 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 WFDC9Q8NEX5 89 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 SUN5Q8TC36 379 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 MYOZ3Q8TDC0 251 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 RAB24Q969Q5 203 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 RNF125Q96EQ8 232 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 LINC00052Q96N35 136 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 PEF1Q9UBV8 284 aaKnown RBP10.18□□□□□ -0.78
SEC13-209ENST00000397117 PUS1Q9Y606 427 aaKnown RBP eCLIP10.18□□□□□ -0.78
SEC13-209ENST00000397117 DNAH9Q9NYC9 4486 aa10.18□□□□□ -0.78
SEC13-209ENST00000397117 A0A1B0GV50 99 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 MAP1LC3B2A6NCE7 125 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 NUDT19A8MXV4 375 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 OR2C1O95371 312 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 TRBV12-3P01733 135 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 HBE1P02100 147 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 LGALS1P09382 135 aaKnown RBP10.17□□□□□ -0.78
SEC13-209ENST00000397117 PLP1P60201 277 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 ZNF726P1Q15940 193 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 OR4F17Q8NGA8 305 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 TMEM37Q8WXS4 190 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 OR4F4Q96R69 305 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 MRPL32Q9BYC8 188 aaKnown RBP10.17□□□□□ -0.78
SEC13-209ENST00000397117 MAP1LC3BQ9GZQ8 125 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 SEPSECSQ9HD40 501 aaKnown RBP10.17□□□□□ -0.78
SEC13-209ENST00000397117 FUT9Q9Y231 359 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 HIGD1AQ9Y241 93 aa10.17□□□□□ -0.78
SEC13-209ENST00000397117 WI2-2373I1.2A0A1W2PRP0 233 aa10.16□□□□□ -0.78
SEC13-209ENST00000397117 K7EIL1 84 aa10.16□□□□□ -0.78
SEC13-209ENST00000397117 BMPR1BO00238 502 aa10.16□□□□□ -0.78
SEC13-209ENST00000397117 HMGB3O15347 200 aaKnown RBP10.16□□□□□ -0.78
SEC13-209ENST00000397117 GGCTO75223 188 aaKnown RBP10.16□□□□□ -0.78
SEC13-209ENST00000397117 TAS2R45P59539 299 aa10.16□□□□□ -0.78
SEC13-209ENST00000397117 IL34Q6ZMJ4 242 aa10.16□□□□□ -0.78
SEC13-209ENST00000397117 LINC00305Q7Z4B0 112 aa10.16□□□□□ -0.78
SEC13-209ENST00000397117 MBD3L1Q8WWY6 194 aa10.16□□□□□ -0.78
SEC13-209ENST00000397117 CITED2Q99967 270 aaPredicted RBP10.16□□□□□ -0.78
SEC13-209ENST00000397117 RAB19A4D1S5 217 aa10.15□□□□□ -0.78
SEC13-209ENST00000397117 EIF3GO75821 320 aaKnown RBP eCLIP10.15□□□□□ -0.78
SEC13-209ENST00000397117 S100A7P31151 101 aa10.15□□□□□ -0.78
SEC13-209ENST00000397117 CDX1P47902 265 aaPredicted RBP10.15□□□□□ -0.78
SEC13-209ENST00000397117 FGF8P55075 233 aaPredicted RBP10.15□□□□□ -0.78
SEC13-209ENST00000397117 TCTEX1D4Q5JR98 221 aa10.15□□□□□ -0.78
SEC13-209ENST00000397117 TOMM20LQ6UXN7 152 aa10.15□□□□□ -0.78
SEC13-209ENST00000397117 PATE2Q6UY27 113 aa10.15□□□□□ -0.78
SEC13-209ENST00000397117 SSX7Q7RTT5 188 aa10.15□□□□□ -0.78
SEC13-209ENST00000397117 MARC2Q969Z3 335 aa10.15□□□□□ -0.78
SEC13-209ENST00000397117 UHRF2Q96PU4 802 aa10.15□□□□□ -0.78
SEC13-209ENST00000397117 TECRQ9NZ01 308 aaKnown RBP10.15□□□□□ -0.78
SEC13-209ENST00000397117 TRAV1-1A0A0B4J248 108 aa10.15□□□□□ -0.79
SEC13-209ENST00000397117 IGLL1P15814 213 aa10.15□□□□□ -0.79
SEC13-209ENST00000397117 SPATA31B1PQ5VZV4 182 aa10.15□□□□□ -0.79
SEC13-209ENST00000397117 MIR17HGQ75NE6 70 aa10.15□□□□□ -0.79
SEC13-209ENST00000397117 IQCF2Q8IXL9 164 aa10.15□□□□□ -0.79
SEC13-209ENST00000397117 C4orf3Q8WVX3 66 aa10.15□□□□□ -0.79
SEC13-209ENST00000397117 RABAC1Q9UI14 185 aa10.15□□□□□ -0.79
SEC13-209ENST00000397117 IGHV3OR16-8A0A075B7F1 116 aa10.14□□□□□ -0.79
SEC13-209ENST00000397117 NDUFA4O00483 81 aa10.14□□□□□ -0.79
SEC13-209ENST00000397117 SCO1O75880 301 aa10.14□□□□□ -0.79
SEC13-209ENST00000397117 CXorf1O96002 111 aa10.14□□□□□ -0.79
SEC13-209ENST00000397117 C8orf88P0DMB2 117 aa10.14□□□□□ -0.79
SEC13-209ENST00000397117 USF2Q15853 346 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms