RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 C20orf24Q9BUV8 137 aa11.9□□□□□ -0.5
VAMP1-202ENST00000396308 TSSC4Q9Y5U2 329 aaPredicted RBP11.9□□□□□ -0.5
VAMP1-202ENST00000396308 FN1P02751 2386 aaKnown RBP11.9□□□□□ -0.51
VAMP1-202ENST00000396308 IGHV3-35A0A0C4DH35 117 aa11.89□□□□□ -0.51
VAMP1-202ENST00000396308 A0A1B0GV50 99 aa11.89□□□□□ -0.51
VAMP1-202ENST00000396308 OR7C2O60412 319 aa11.89□□□□□ -0.51
VAMP1-202ENST00000396308 HSPB1P04792 205 aaKnown RBP11.89□□□□□ -0.51
VAMP1-202ENST00000396308 BMI1P35226 326 aa11.89□□□□□ -0.51
VAMP1-202ENST00000396308 PROK1P58294 105 aa11.89□□□□□ -0.51
VAMP1-202ENST00000396308 KIAA0141Q14154 515 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-202ENST00000396308 ZNF726P1Q15940 193 aa11.89□□□□□ -0.51
VAMP1-202ENST00000396308 TOMM20LQ6UXN7 152 aa11.89□□□□□ -0.51
VAMP1-202ENST00000396308 TMEM37Q8WXS4 190 aa11.89□□□□□ -0.51
VAMP1-202ENST00000396308 SEPSECSQ9HD40 501 aaKnown RBP11.89□□□□□ -0.51
VAMP1-202ENST00000396308 HMGB3O15347 200 aaKnown RBP11.88□□□□□ -0.51
VAMP1-202ENST00000396308 TRBV12-3P01733 135 aa11.88□□□□□ -0.51
VAMP1-202ENST00000396308 STAG3L2P0CL84 134 aa11.88□□□□□ -0.51
VAMP1-202ENST00000396308 STAG3L3P0CL85 134 aa11.88□□□□□ -0.51
VAMP1-202ENST00000396308 ARL14EPLP0DKL9 152 aa11.88□□□□□ -0.51
VAMP1-202ENST00000396308 PSMB3P49720 205 aa11.88□□□□□ -0.51
VAMP1-202ENST00000396308 SRSF2Q01130 221 aaKnown RBP11.88□□□□□ -0.51
VAMP1-202ENST00000396308 MIR17HGQ75NE6 70 aa11.88□□□□□ -0.51
VAMP1-202ENST00000396308 COMMD7Q86VX2 200 aa11.88□□□□□ -0.51
VAMP1-202ENST00000396308 WIPF2Q8TF74 440 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-202ENST00000396308 GRAMD2BQ96HH9 432 aa11.88□□□□□ -0.51
VAMP1-202ENST00000396308 UHRF2Q96PU4 802 aa11.88□□□□□ -0.51
VAMP1-202ENST00000396308 SLC25A39Q9BZJ4 359 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-202ENST00000396308 ZFAND3Q9H8U3 227 aa11.88□□□□□ -0.51
VAMP1-202ENST00000396308 MED9Q9NWA0 146 aa11.88□□□□□ -0.51
VAMP1-202ENST00000396308 MRPL27Q9P0M9 148 aaKnown RBP11.88□□□□□ -0.51
VAMP1-202ENST00000396308 UFC1Q9Y3C8 167 aa11.88□□□□□ -0.51
VAMP1-202ENST00000396308 FBN3Q75N90 2809 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 ZNF320A2RRD8 509 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 LINC00862A6NCI5 91 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 H3BRN7 92 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 CD28P10747 220 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 NPPCP23582 126 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 TAGLN2P37802 199 aaKnown RBP11.87□□□□□ -0.51
VAMP1-202ENST00000396308 FGF8P55075 233 aaPredicted RBP11.87□□□□□ -0.51
VAMP1-202ENST00000396308 USF2Q15853 346 aaPredicted RBP11.87□□□□□ -0.51
VAMP1-202ENST00000396308 PATE2Q6UY27 113 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.87□□□□□ -0.51
VAMP1-202ENST00000396308 LYPD6BQ8NI32 183 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 TMEM190Q8WZ59 177 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 SHANK2-AS3Q9BTD1 123 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 TMEM231Q9H6L2 316 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 MANBALQ9NQG1 85 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 TMEM167BQ9NRX6 74 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 SVEP1Q4LDE5 3571 aa11.87□□□□□ -0.51
VAMP1-202ENST00000396308 LINC01619G3V211 115 aa11.86□□□□□ -0.51
VAMP1-202ENST00000396308 I3L521 148 aa11.86□□□□□ -0.51
VAMP1-202ENST00000396308 UBE2L3P68036 154 aaKnown RBP11.86□□□□□ -0.51
VAMP1-202ENST00000396308 TCTEX1D4Q5JR98 221 aa11.86□□□□□ -0.51
VAMP1-202ENST00000396308 SPATA31B1PQ5VZV4 182 aa11.86□□□□□ -0.51
VAMP1-202ENST00000396308 SSX7Q7RTT5 188 aa11.86□□□□□ -0.51
VAMP1-202ENST00000396308 BPIFA4PQ86YQ2 179 aa11.86□□□□□ -0.51
VAMP1-202ENST00000396308 GPHB5Q86YW7 130 aa11.86□□□□□ -0.51
VAMP1-202ENST00000396308 C11orf44Q8N8P7 122 aa11.86□□□□□ -0.51
VAMP1-202ENST00000396308 MARC2Q969Z3 335 aa11.86□□□□□ -0.51
VAMP1-202ENST00000396308 GPR82Q96P67 336 aa11.86□□□□□ -0.51
VAMP1-202ENST00000396308 PAXXQ9BUH6 204 aa11.86□□□□□ -0.51
VAMP1-202ENST00000396308 IGHV4OR15-8A0A075B7B6 117 aa11.85□□□□□ -0.51
VAMP1-202ENST00000396308 A0A087WW49 117 aa11.85□□□□□ -0.51
VAMP1-202ENST00000396308 A0A1W2PRX2 142 aa11.85□□□□□ -0.51
VAMP1-202ENST00000396308 A0A1W2PS18 150 aa11.85□□□□□ -0.51
VAMP1-202ENST00000396308 GCHFRP30047 84 aa11.85□□□□□ -0.51
VAMP1-202ENST00000396308 C1QL4Q86Z23 238 aa11.85□□□□□ -0.51
VAMP1-202ENST00000396308 OR4F17Q8NGA8 305 aa11.85□□□□□ -0.51
VAMP1-202ENST00000396308 OR1N2Q8NGR9 330 aa11.85□□□□□ -0.51
VAMP1-202ENST00000396308 OR4F4Q96R69 305 aa11.85□□□□□ -0.51
VAMP1-202ENST00000396308 CITED2Q99967 270 aaPredicted RBP11.85□□□□□ -0.51
VAMP1-202ENST00000396308 SCRT1Q9BWW7 348 aa11.85□□□□□ -0.51
VAMP1-202ENST00000396308 SLC25A2Q9BXI2 301 aa11.85□□□□□ -0.51
VAMP1-202ENST00000396308 OR51M1Q9H341 326 aa11.85□□□□□ -0.51
VAMP1-202ENST00000396308 DAZ1Q9NQZ3 744 aaKnown RBP11.85□□□□□ -0.51
VAMP1-202ENST00000396308 GNG13Q9P2W3 67 aa11.85□□□□□ -0.51
VAMP1-202ENST00000396308 IGHV3OR16-8A0A075B7F1 116 aa11.84□□□□□ -0.51
VAMP1-202ENST00000396308 RAB19A4D1S5 217 aa11.84□□□□□ -0.51
VAMP1-202ENST00000396308 ZNF98A6NK75 572 aa11.84□□□□□ -0.51
VAMP1-202ENST00000396308 M0QZ24 198 aa11.84□□□□□ -0.51
VAMP1-202ENST00000396308 RPL7P18124 248 aaKnown RBP11.84□□□□□ -0.51
VAMP1-202ENST00000396308 HOXD3P31249 432 aaPredicted RBP11.84□□□□□ -0.51
VAMP1-202ENST00000396308 REC114Q7Z4M0 266 aa11.84□□□□□ -0.51
VAMP1-202ENST00000396308 NDUFA11Q86Y39 141 aa11.84□□□□□ -0.51
VAMP1-202ENST00000396308 OR8I2Q8N0Y5 310 aa11.84□□□□□ -0.51
VAMP1-202ENST00000396308 OR11H1Q8NG94 326 aa11.84□□□□□ -0.51
VAMP1-202ENST00000396308 ELOVL1Q9BW60 279 aa11.84□□□□□ -0.51
VAMP1-202ENST00000396308 EIF5A2Q9GZV4 153 aaKnown RBP11.84□□□□□ -0.51
VAMP1-202ENST00000396308 K7EMT4 169 aa11.83□□□□□ -0.52
VAMP1-202ENST00000396308 LGALS9O00182 355 aa11.83□□□□□ -0.52
VAMP1-202ENST00000396308 ATF4P18848 351 aaPredicted RBP11.83□□□□□ -0.52
VAMP1-202ENST00000396308 PEA15Q15121 130 aa11.83□□□□□ -0.52
VAMP1-202ENST00000396308 C1orf194Q5T5A4 169 aa11.83□□□□□ -0.52
VAMP1-202ENST00000396308 C8orf86Q6ZUL3 223 aa11.83□□□□□ -0.52
VAMP1-202ENST00000396308 FAM210AQ96ND0 272 aa11.83□□□□□ -0.52
VAMP1-202ENST00000396308 TMEM14CQ9P0S9 112 aa11.83□□□□□ -0.52
VAMP1-202ENST00000396308 PEMTQ9UBM1 199 aa11.83□□□□□ -0.52
VAMP1-202ENST00000396308 TRAV5A0A0B4J249 113 aa11.82□□□□□ -0.52
VAMP1-202ENST00000396308 RBFOX3A6NFN3 312 aa11.82□□□□□ -0.52
VAMP1-202ENST00000396308 ZNF207O43670 478 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms