RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 HPRT1P00492 218 aa9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 OR5AC1P0C628 307 aa9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 NQO2P16083 231 aa9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 RELQ04864 619 aaPredicted RBP9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 FAM222AQ5U5X8 452 aa9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 TBC1D26Q86UD7 250 aa9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 DCANP1Q8TF63 244 aa9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 RBPMSQ93062 196 aaKnown RBP9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 LSM10Q969L4 123 aaKnown RBP9.56□□□□□ -0.88
VCPKMT-201ENST00000395859 CYB5BO43169 146 aa9.55□□□□□ -0.88
VCPKMT-201ENST00000395859 TNFSF12O43508 249 aa9.55□□□□□ -0.88
VCPKMT-201ENST00000395859 SMR3BP02814 79 aaPredicted RBP9.55□□□□□ -0.88
VCPKMT-201ENST00000395859 RLN2P04090 185 aa9.55□□□□□ -0.88
VCPKMT-201ENST00000395859 PI3P19957 117 aa9.55□□□□□ -0.88
VCPKMT-201ENST00000395859 IL15RAQ13261 267 aa9.55□□□□□ -0.88
VCPKMT-201ENST00000395859 OR2F1Q13607 317 aa9.55□□□□□ -0.88
VCPKMT-201ENST00000395859 POU2AF1Q16633 256 aa9.55□□□□□ -0.88
VCPKMT-201ENST00000395859 ACTL10Q5JWF8 245 aa9.55□□□□□ -0.88
VCPKMT-201ENST00000395859 THOC7Q6I9Y2 204 aaKnown RBP9.55□□□□□ -0.88
VCPKMT-201ENST00000395859 SLC25A24Q6NUK1 477 aa9.55□□□□□ -0.88
VCPKMT-201ENST00000395859 LINC00588Q9Y4M8 146 aa9.55□□□□□ -0.88
VCPKMT-201ENST00000395859 F11RQ9Y624 299 aaKnown RBP9.55□□□□□ -0.88
VCPKMT-201ENST00000395859 TEX48A0A1B0GUV7 120 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 SMIM9A6NGZ8 99 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 UPK2O00526 184 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 ST8SIA3O43173 380 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 NUP62P37198 522 aaPredicted RBP9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 KRTAP10-1P60331 282 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 SMCO1Q147U7 214 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 PHLDA2Q53GA4 152 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 Q56UQ5 140 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 C9orf62Q8N4C0 152 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 ZBTB8BQ8NAP8 495 aaPredicted RBP9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 UBAC2Q8NBM4 344 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 PPP1R1CQ8WVI7 109 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 ATG101Q9BSB4 218 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 C1QTNF4Q9BXJ3 329 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 QTRT1Q9BXR0 403 aaKnown RBP9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 COMMD5Q9GZQ3 224 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 PLEKHA2Q9HB19 425 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 PGPEP1Q9NXJ5 209 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 XCL2Q9UBD3 114 aa9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 PAIP2BQ9ULR5 123 aaKnown RBP9.54□□□□□ -0.88
VCPKMT-201ENST00000395859 A0A1B0GU03 582 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 FAM90A26D6RGX4 464 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 G3V3Q6 166 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 YIF1AO95070 293 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 MPC2O95563 127 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 ZNF688P0C7X2 276 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 OR13C7P0DN81 318 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 HTN3P15516 51 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 FUSP35637 526 aaKnown RBP eCLIP9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 EMP1P54849 157 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 PRSS54Q6PEW0 395 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 TOMM20LQ6UXN7 152 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 Q6ZRN7 208 aaPredicted RBP9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 Q6ZSN1 163 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 ACOT7LQ6ZUV0 252 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 HSD17B13Q7Z5P4 300 aaPredicted RBP9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 ZNF546Q86UE3 836 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 SYT8Q8NBV8 401 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 INO80EQ8NBZ0 244 aaPredicted RBP9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 DMBX1Q8NFW5 382 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 RAB40CQ96S21 281 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 GPHA2Q96T91 129 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 RABAC1Q9UI14 185 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 HSPB11Q9Y547 144 aa9.53□□□□□ -0.88
VCPKMT-201ENST00000395859 IGHV3-66A0A0C4DH42 116 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 FAM25EA8MYX2 175 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 L7N2F9 121 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 S100A11P31949 105 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 ERVK-16P61578 105 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 NDUFA5Q16718 116 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 IAH1Q2TAA2 248 aaPredicted RBP9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 TMEM268Q5VZI3 342 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 GGNBP1Q5YKI7 109 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 CDPF1Q6NVV7 123 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 OR51H1Q8NH63 302 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 TP53RKQ96S44 253 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 Q9H3A6 140 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 NDUFA4L2Q9NRX3 87 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 RFNGQ9Y644 331 aa9.52□□□□□ -0.89
VCPKMT-201ENST00000395859 TEX50A0A1B0GTY4 177 aa9.51□□□□□ -0.89
VCPKMT-201ENST00000395859 I3L2K1 104 aa9.51□□□□□ -0.89
VCPKMT-201ENST00000395859 TAAR5O14804 337 aa9.51□□□□□ -0.89
VCPKMT-201ENST00000395859 PVALBP20472 110 aaPredicted RBP9.51□□□□□ -0.89
VCPKMT-201ENST00000395859 EIF5AP63241 154 aaKnown RBP9.51□□□□□ -0.89
VCPKMT-201ENST00000395859 SELENOHQ8IZQ5 122 aaKnown RBP9.51□□□□□ -0.89
VCPKMT-201ENST00000395859 OR11H4Q8NGC9 324 aa9.51□□□□□ -0.89
VCPKMT-201ENST00000395859 RRNAD1Q96FB5 475 aaKnown RBP9.51□□□□□ -0.89
VCPKMT-201ENST00000395859 TXN2Q99757 166 aa9.51□□□□□ -0.89
VCPKMT-201ENST00000395859 GINS3Q9BRX5 216 aa9.51□□□□□ -0.89
VCPKMT-201ENST00000395859 TMEM140Q9NV12 185 aa9.51□□□□□ -0.89
VCPKMT-201ENST00000395859 TNFSF18Q9UNG2 199 aa9.51□□□□□ -0.89
VCPKMT-201ENST00000395859 PLA2G2DQ9UNK4 145 aa9.51□□□□□ -0.89
VCPKMT-201ENST00000395859 E5RGE8 158 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 H3BMM0 161 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 FAM229AH3BQW9 127 aa9.5□□□□□ -0.89
VCPKMT-201ENST00000395859 ADAP1O75689 374 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms