RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 STAG3L3P0CL85 134 aa8.27□□□□□ -1.09
HIF1A-203ENST00000394997 RPL15P61313 204 aaKnown RBP8.27□□□□□ -1.09
HIF1A-203ENST00000394997 SCGB2A2Q13296 93 aa8.27□□□□□ -1.09
HIF1A-203ENST00000394997 LY6DQ14210 128 aa8.27□□□□□ -1.09
HIF1A-203ENST00000394997 COX19Q49B96 90 aa8.27□□□□□ -1.09
HIF1A-203ENST00000394997 MOB3BQ86TA1 216 aa8.27□□□□□ -1.09
HIF1A-203ENST00000394997 SETD2Q9BYW2 2564 aaPredicted RBP8.26□□□□□ -1.09
HIF1A-203ENST00000394997 LOC389332A0A1B0GUA5 103 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 GAGE12BA1L429 117 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 APELAP0DMC3 54 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 TP73-AS1Q9UF72 201 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 RALYQ9UKM9 306 aaKnown RBP8.26□□□□□ -1.09
HIF1A-203ENST00000394997 LINC00312Q9Y6C7 94 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 CFAP46Q8IYW2 2715 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 UTP20O75691 2785 aaKnown RBP8.26□□□□□ -1.09
HIF1A-203ENST00000394997 FOXH1O75593 365 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 PDLIM4P50479 330 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 TMEM108Q6UXF1 575 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 FLYWCH2Q96CP2 140 aaKnown RBP8.26□□□□□ -1.09
HIF1A-203ENST00000394997 PGLYRP4Q96LB8 373 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 CCL13Q99616 98 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 NDUFA4L2Q9NRX3 87 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 TCF19Q9Y242 345 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 ZNF257Q9Y2Q1 563 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 YTHDF2Q9Y5A9 579 aaKnown RBP8.26□□□□□ -1.09
HIF1A-203ENST00000394997 H0YJW9 148 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 LY6LH3BQJ8 138 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 GOSR1O95249 250 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 IGFBP2P18065 325 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 EFNB3Q15768 340 aa8.26□□□□□ -1.09
HIF1A-203ENST00000394997 SMAGPQ0VAQ4 97 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 COMMD5Q9GZQ3 224 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 MRPL36Q9P0J6 103 aaKnown RBP8.25□□□□□ -1.09
HIF1A-203ENST00000394997 PEF1Q9UBV8 284 aaKnown RBP8.25□□□□□ -1.09
HIF1A-203ENST00000394997 K7EN84 100 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 HIST1H1EP10412 219 aaKnown RBP8.25□□□□□ -1.09
HIF1A-203ENST00000394997 ARL3P36405 182 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 LINC00310P59036 64 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 CDC42EP3Q9UKI2 254 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 TRBV9A0A0B4J1U6 114 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 TEX50A0A1B0GTY4 177 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 ENSAO43768 121 aaKnown RBP8.25□□□□□ -1.09
HIF1A-203ENST00000394997 IGLL1P15814 213 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 CD24P25063 80 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 BPIFB3P59826 476 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 PRCDQ00LT1 54 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 TMEM177Q53S58 311 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 TSKUQ8WUA8 353 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 C11orf52Q96A22 123 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 NABP2Q9BQ15 211 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 TXNDC17Q9BRA2 123 aa8.25□□□□□ -1.09
HIF1A-203ENST00000394997 USP9XQ93008 2570 aaPredicted RBP8.25□□□□□ -1.09
HIF1A-203ENST00000394997 IGHV3-21A0A0B4J1V1 117 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 IGHV1-69-2A0A0G2JMI3 117 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 C7orf71A4D174 169 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 UPK2O00526 184 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 IGLV2-8P01709 118 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 RNASE2P10153 161 aaKnown RBP8.24□□□□□ -1.09
HIF1A-203ENST00000394997 MORN5Q5VZ52 161 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 FAM167A-AS1Q96KT0 104 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 TRAV30A0A087WSZ9 112 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 TMSB15BA0A087X1C1 80 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 J3QR89 54 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 IGLV1-47P01700 117 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 GRNP28799 593 aaKnown RBP8.24□□□□□ -1.09
HIF1A-203ENST00000394997 CDKN1BP46527 198 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 ZNF138P52744 262 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 TNFAIP6P98066 277 aaPredicted RBP8.24□□□□□ -1.09
HIF1A-203ENST00000394997 PAX2Q02962 417 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 RTL8BQ17RB0 113 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 FAM162BQ5T6X4 162 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 FAM71F2Q6NXP2 309 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 PNKDQ8N490 385 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 A0A1W2PRD5 423 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 A0A1W2PRF3 423 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 A0A1W2PRM7 423 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 A6NDN8 102 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 ZNF207O43670 478 aaKnown RBP8.24□□□□□ -1.09
HIF1A-203ENST00000394997 MPDU1O75352 247 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 P01737 135 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 FAM87AP0C7U9 286 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 COL8A1P27658 744 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 ARF6P62330 175 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 MZT1Q08AG7 82 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 TMEM155Q4W5P6 130 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 CLEC2AQ6UVW9 174 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 TCF24Q7RTU0 167 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 LINC00479Q96M42 142 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 GNB1LQ9BYB4 327 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 PLXNB1O43157 2135 aa8.24□□□□□ -1.09
HIF1A-203ENST00000394997 GCSHP23434 173 aa8.23□□□□□ -1.09
HIF1A-203ENST00000394997 KIR2DS2P43631 304 aa8.23□□□□□ -1.09
HIF1A-203ENST00000394997 RBX1P62877 108 aa8.23□□□□□ -1.09
HIF1A-203ENST00000394997 C11orf71Q6IPW1 123 aa8.23□□□□□ -1.09
HIF1A-203ENST00000394997 RND1Q92730 232 aa8.23□□□□□ -1.09
HIF1A-203ENST00000394997 AMMECR1Q9Y4X0 333 aaPredicted RBP8.23□□□□□ -1.09
HIF1A-203ENST00000394997 FAM181BA6NEQ2 426 aa8.23□□□□□ -1.09
HIF1A-203ENST00000394997 HIGD1CA8MV81 97 aa8.23□□□□□ -1.09
HIF1A-203ENST00000394997 CCL3L1P16619 93 aa8.23□□□□□ -1.09
HIF1A-203ENST00000394997 MYCNOSP40205 109 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms