RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 SPSB3Q6PJ21 355 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 MGST2Q99735 147 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.08□□□□□ -0.8
SIN3A-202ENST00000394947 DLX4Q92988 240 aaPredicted RBP10.08□□□□□ -0.8
SIN3A-202ENST00000394947 PLSCR4Q9NRQ2 329 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 HOXB1P14653 301 aaPredicted RBP10.08□□□□□ -0.8
SIN3A-202ENST00000394947 SEC11AP67812 179 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 HIST1H2BLQ99880 126 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 CARHSP1Q9Y2V2 147 aaKnown RBP10.08□□□□□ -0.8
SIN3A-202ENST00000394947 TRAV26-2A0A0B4J265 109 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 GNLYP22749 145 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 RIPPLY2Q5TAB7 128 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 AMN1Q8IY45 258 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 NDUFAF3Q9BU61 184 aa10.08□□□□□ -0.8
SIN3A-202ENST00000394947 IQCF6A8MYZ5 107 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 ZNF497Q6ZNH5 498 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 NEGR1Q7Z3B1 354 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 CHCHD1Q96BP2 118 aaKnown RBP10.07□□□□□ -0.8
SIN3A-202ENST00000394947 TM2D1Q9BX74 207 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 UCP1P25874 307 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 TSKUQ8WUA8 353 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 GNB1LQ9BYB4 327 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 A0A0A6YYD4 124 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 TMEM200BQ69YZ2 307 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 C8orf49Q96NF6 230 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 CASP8AP2Q9UKL3 1982 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 IGHV2-26A0A0B4J1V2 119 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 OVOL1O14753 267 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 GREM1O60565 184 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 FOXG1P55316 489 aaPredicted RBP10.07□□□□□ -0.8
SIN3A-202ENST00000394947 DOCK9Q9BZ29 2069 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.07□□□□□ -0.8
SIN3A-202ENST00000394947 GAGE6Q13070 117 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 ZNRD1Q9P1U0 126 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 LAMB2P55268 1798 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 F2Z2F3 143 aa10.07□□□□□ -0.8
SIN3A-202ENST00000394947 IGKV1D-8A0A087WSZ0 117 aa10.06□□□□□ -0.8
SIN3A-202ENST00000394947 NDUFS6O75380 124 aaKnown RBP10.06□□□□□ -0.8
SIN3A-202ENST00000394947 NUP35Q8NFH5 326 aa10.06□□□□□ -0.8
SIN3A-202ENST00000394947 C1QTNF5Q9BXJ0 243 aa10.06□□□□□ -0.8
SIN3A-202ENST00000394947 A0A087WWC5 75 aa10.06□□□□□ -0.8
SIN3A-202ENST00000394947 MBD3L4A6NDZ8 208 aaPredicted RBP10.06□□□□□ -0.8
SIN3A-202ENST00000394947 MBD3L3A6NE82 208 aaPredicted RBP10.06□□□□□ -0.8
SIN3A-202ENST00000394947 MBD3L5A6NJ08 208 aaPredicted RBP10.06□□□□□ -0.8
SIN3A-202ENST00000394947 CD5P06127 495 aa10.06□□□□□ -0.8
SIN3A-202ENST00000394947 MLANAQ16655 118 aa10.06□□□□□ -0.8
SIN3A-202ENST00000394947 MBD3L2Q8NHZ7 208 aaPredicted RBP10.06□□□□□ -0.8
SIN3A-202ENST00000394947 TUBGCP6Q96RT7 1819 aa10.06□□□□□ -0.8
SIN3A-202ENST00000394947 ZNF124Q15973 351 aa10.06□□□□□ -0.8
SIN3A-202ENST00000394947 SHANK3Q9BYB0 1731 aa10.06□□□□□ -0.8
SIN3A-202ENST00000394947 PI4KAP42356 2102 aa10.06□□□□□ -0.8
SIN3A-202ENST00000394947 TRAV12-2A0A075B6T6 113 aa10.06□□□□□ -0.8
SIN3A-202ENST00000394947 CACNA1DQ01668 2161 aa10.06□□□□□ -0.8
SIN3A-202ENST00000394947 IL17RELQ6ZVW7 336 aa10.06□□□□□ -0.8
SIN3A-202ENST00000394947 FOXD3Q9UJU5 478 aaPredicted RBP10.06□□□□□ -0.8
SIN3A-202ENST00000394947 LY75O60449 1722 aa10.05□□□□□ -0.8
SIN3A-202ENST00000394947 IGLV2-23P01705 113 aa10.05□□□□□ -0.8
SIN3A-202ENST00000394947 IGHG3P01860 377 aa10.05□□□□□ -0.8
SIN3A-202ENST00000394947 RNASE6Q93091 150 aaKnown RBP10.05□□□□□ -0.8
SIN3A-202ENST00000394947 IGHV1-46P01743 117 aa10.05□□□□□ -0.8
SIN3A-202ENST00000394947 AMBPP02760 352 aa10.05□□□□□ -0.8
SIN3A-202ENST00000394947 PAX9P55771 341 aa10.05□□□□□ -0.8
SIN3A-202ENST00000394947 TMEM30BQ3MIR4 351 aa10.05□□□□□ -0.8
SIN3A-202ENST00000394947 TEX38Q6PEX7 206 aa10.05□□□□□ -0.8
SIN3A-202ENST00000394947 SCRT2Q9NQ03 307 aa10.05□□□□□ -0.8
SIN3A-202ENST00000394947 COL22A1Q8NFW1 1626 aaPredicted RBP10.05□□□□□ -0.8
SIN3A-202ENST00000394947 PLEKHB2Q96CS7 222 aa10.05□□□□□ -0.8
SIN3A-202ENST00000394947 QSER1Q2KHR3 1735 aa10.05□□□□□ -0.8
SIN3A-202ENST00000394947 TAL2Q16559 108 aa10.05□□□□□ -0.8
SIN3A-202ENST00000394947 KIF13BQ9NQT8 1826 aa10.05□□□□□ -0.8
SIN3A-202ENST00000394947 ARAP2Q8WZ64 1704 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 YPEL1O60688 119 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 SPINK13Q1W4C9 94 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 LINC00479Q96M42 142 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 YPEL2Q96QA6 119 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 CHAC1Q9BUX1 264 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 OSTCQ9NRP0 149 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 RGPD3A6NKT7 1758 aaPredicted RBP10.04□□□□□ -0.8
SIN3A-202ENST00000394947 A0A1B0GUS0 222 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 CD200R1LQ6Q8B3 271 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 DEFB131AP59861 70 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 HEATR1Q9H583 2144 aaKnown RBP10.04□□□□□ -0.8
SIN3A-202ENST00000394947 F5P12259 2224 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 ATAD5Q96QE3 1844 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 IGKV1-5P01602 117 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 ZNF672Q499Z4 452 aaPredicted RBP10.04□□□□□ -0.8
SIN3A-202ENST00000394947 WBP1Q96G27 269 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 NRXN3Q9Y4C0 1643 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 GAGE12BA1L429 117 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 GAGE7O76087 117 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 GAGE12FP0CL80 117 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 GAGE12GP0CL81 117 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 GAGE12IP0CL82 117 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 DNAJC30Q96LL9 226 aa10.04□□□□□ -0.8
SIN3A-202ENST00000394947 TRBV6-7A0A0A0MS04 114 aa10.03□□□□□ -0.8
SIN3A-202ENST00000394947 MYMXA0A1B0GTQ4 84 aa10.03□□□□□ -0.8
SIN3A-202ENST00000394947 MMP23AO75900 390 aa10.03□□□□□ -0.8
SIN3A-202ENST00000394947 IGHV1-3A0A0C4DH29 117 aa10.03□□□□□ -0.8
SIN3A-202ENST00000394947 DUTP33316 252 aaKnown RBP10.03□□□□□ -0.8
SIN3A-202ENST00000394947 PRCDQ00LT1 54 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms