RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 GAMTQ14353 236 aa14.89□□□□□ -0.03
TRAF4-203ENST00000394925 OR8I2Q8N0Y5 310 aa14.89□□□□□ -0.03
TRAF4-203ENST00000394925 DTD1Q8TEA8 209 aa14.89□□□□□ -0.03
TRAF4-203ENST00000394925 C15orf40Q8WUR7 153 aa14.89□□□□□ -0.03
TRAF4-203ENST00000394925 SLC35E1Q96K37 410 aa14.89□□□□□ -0.03
TRAF4-203ENST00000394925 RPRMQ9NS64 109 aa14.89□□□□□ -0.03
TRAF4-203ENST00000394925 GPR132Q9UNW8 380 aa14.89□□□□□ -0.03
TRAF4-203ENST00000394925 DISC1C4P0D8 188 aa14.88□□□□□ -0.03
TRAF4-203ENST00000394925 GABARAPH6UMI1 98 aa14.88□□□□□ -0.03
TRAF4-203ENST00000394925 CDK2AP2O75956 126 aa14.88□□□□□ -0.03
TRAF4-203ENST00000394925 GABARAPO95166 117 aa14.88□□□□□ -0.03
TRAF4-203ENST00000394925 OR2F1Q13607 317 aa14.88□□□□□ -0.03
TRAF4-203ENST00000394925 SURF2Q15527 256 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-203ENST00000394925 C20orf173Q96LM9 149 aa14.88□□□□□ -0.03
TRAF4-203ENST00000394925 RBKSQ9H477 322 aa14.88□□□□□ -0.03
TRAF4-203ENST00000394925 SNRPGP15A8MWD9 76 aa14.87□□□□□ -0.03
TRAF4-203ENST00000394925 PRM2P04554 102 aa14.87□□□□□ -0.03
TRAF4-203ENST00000394925 ZNF182P17025 639 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-203ENST00000394925 GPX4P36969 197 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-203ENST00000394925 C16orf92Q96LL3 132 aa14.87□□□□□ -0.03
TRAF4-203ENST00000394925 IGF2BP2-AS1Q96M15 143 aa14.87□□□□□ -0.03
TRAF4-203ENST00000394925 DOK5Q9P104 306 aa14.87□□□□□ -0.03
TRAF4-203ENST00000394925 HSPB7Q9UBY9 170 aa14.87□□□□□ -0.03
TRAF4-203ENST00000394925 NBDYA0A0U1RRE5 68 aa14.86□□□□□ -0.03
TRAF4-203ENST00000394925 ZNF705GA8MUZ8 300 aaPredicted RBP14.86□□□□□ -0.03
TRAF4-203ENST00000394925 FABP1P07148 127 aa14.86□□□□□ -0.03
TRAF4-203ENST00000394925 C6orf223Q8N319 242 aa14.86□□□□□ -0.03
TRAF4-203ENST00000394925 IL22RA2Q969J5 263 aa14.86□□□□□ -0.03
TRAF4-203ENST00000394925 DEFB130BP0DP73 79 aa14.85□□□□□ -0.03
TRAF4-203ENST00000394925 DEFB130AP0DP74 79 aa14.85□□□□□ -0.03
TRAF4-203ENST00000394925 CCR6P51684 374 aa14.85□□□□□ -0.03
TRAF4-203ENST00000394925 SSBP1Q04837 148 aaKnown RBP14.85□□□□□ -0.03
TRAF4-203ENST00000394925 SMCO1Q147U7 214 aa14.85□□□□□ -0.03
TRAF4-203ENST00000394925 SAMD13Q5VXD3 122 aa14.85□□□□□ -0.03
TRAF4-203ENST00000394925 AMTNQ6UX39 209 aa14.85□□□□□ -0.03
TRAF4-203ENST00000394925 ZNRF2Q8NHG8 242 aa14.85□□□□□ -0.03
TRAF4-203ENST00000394925 NAA50Q9GZZ1 169 aaKnown RBP14.85□□□□□ -0.03
TRAF4-203ENST00000394925 KCNIP3Q9Y2W7 256 aa14.85□□□□□ -0.03
TRAF4-203ENST00000394925 A8MTW9 85 aa14.84□□□□□ -0.03
TRAF4-203ENST00000394925 NUDT3O95989 172 aa14.84□□□□□ -0.03
TRAF4-203ENST00000394925 ALDH3B2P48448 385 aa14.84□□□□□ -0.03
TRAF4-203ENST00000394925 MEOX2P50222 304 aa14.84□□□□□ -0.03
TRAF4-203ENST00000394925 LYZL2Q7Z4W2 148 aa14.84□□□□□ -0.03
TRAF4-203ENST00000394925 OR4C16Q8NGL9 310 aa14.84□□□□□ -0.03
TRAF4-203ENST00000394925 LYRM9A8MSI8 78 aa14.83□□□□□ -0.04
TRAF4-203ENST00000394925 F5H768 121 aa14.83□□□□□ -0.04
TRAF4-203ENST00000394925 AKAIN1P0CW23 69 aa14.83□□□□□ -0.04
TRAF4-203ENST00000394925 GALR1P47211 349 aa14.83□□□□□ -0.04
TRAF4-203ENST00000394925 ATP5IP56385 69 aaPredicted RBP14.83□□□□□ -0.04
TRAF4-203ENST00000394925 TRGV9Q99603 122 aa14.83□□□□□ -0.04
TRAF4-203ENST00000394925 RSG1Q9BU20 258 aa14.83□□□□□ -0.04
TRAF4-203ENST00000394925 MIXL1Q9H2W2 232 aa14.83□□□□□ -0.04
TRAF4-203ENST00000394925 SLC25A22Q9H936 323 aa14.83□□□□□ -0.04
TRAF4-203ENST00000394925 A0A0B4J2A0 478 aa14.82□□□□□ -0.04
TRAF4-203ENST00000394925 M0R2Z0 102 aa14.82□□□□□ -0.04
TRAF4-203ENST00000394925 MRPS10P82664 201 aaKnown RBP14.82□□□□□ -0.04
TRAF4-203ENST00000394925 SPINK13Q1W4C9 94 aa14.82□□□□□ -0.04
TRAF4-203ENST00000394925 OR51S1Q8NGJ8 323 aa14.82□□□□□ -0.04
TRAF4-203ENST00000394925 PRRT1Q99946 306 aa14.82□□□□□ -0.04
TRAF4-203ENST00000394925 SLC25A32Q9H2D1 315 aa14.82□□□□□ -0.04
TRAF4-203ENST00000394925 SHPKQ9UHJ6 478 aa14.82□□□□□ -0.04
TRAF4-203ENST00000394925 APOBP04114 4563 aaKnown RBP14.82□□□□□ -0.04
TRAF4-203ENST00000394925 RGS5O15539 181 aa14.81□□□□□ -0.04
TRAF4-203ENST00000394925 INSP01308 110 aa14.81□□□□□ -0.04
TRAF4-203ENST00000394925 CNN1P51911 297 aaKnown RBP14.81□□□□□ -0.04
TRAF4-203ENST00000394925 FCN2Q15485 313 aa14.81□□□□□ -0.04
TRAF4-203ENST00000394925 CTF1Q16619 201 aa14.81□□□□□ -0.04
TRAF4-203ENST00000394925 OR11H7Q8NGC8 314 aa14.81□□□□□ -0.04
TRAF4-203ENST00000394925 OR1S1Q8NH92 325 aa14.81□□□□□ -0.04
TRAF4-203ENST00000394925 SMIM4Q8WVI0 70 aa14.81□□□□□ -0.04
TRAF4-203ENST00000394925 C17orf77Q96MU5 243 aa14.81□□□□□ -0.04
TRAF4-203ENST00000394925 IGKV1OR2-108A0A075B7D4 117 aa14.8□□□□□ -0.04
TRAF4-203ENST00000394925 CRXO43186 299 aaPredicted RBP14.8□□□□□ -0.04
TRAF4-203ENST00000394925 CCL18P55774 89 aa14.8□□□□□ -0.04
TRAF4-203ENST00000394925 IGFL4Q6B9Z1 124 aa14.8□□□□□ -0.04
TRAF4-203ENST00000394925 CLVS1Q8IUQ0 354 aaPredicted RBP14.8□□□□□ -0.04
TRAF4-203ENST00000394925 PAIP2BQ9ULR5 123 aaKnown RBP14.8□□□□□ -0.04
TRAF4-203ENST00000394925 DNAH5Q8TE73 4624 aa14.8□□□□□ -0.04
TRAF4-203ENST00000394925 ZNF98A6NK75 572 aa14.79□□□□□ -0.04
TRAF4-203ENST00000394925 DUSP14O95147 198 aaKnown RBP14.79□□□□□ -0.04
TRAF4-203ENST00000394925 IAPPP10997 89 aa14.79□□□□□ -0.04
TRAF4-203ENST00000394925 AKR1C4P17516 323 aa14.79□□□□□ -0.04
TRAF4-203ENST00000394925 AZU1P20160 251 aa14.79□□□□□ -0.04
TRAF4-203ENST00000394925 RAB11AP62491 216 aa14.79□□□□□ -0.04
TRAF4-203ENST00000394925 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.79□□□□□ -0.04
TRAF4-203ENST00000394925 BAP18Q8IXM2 172 aa14.79□□□□□ -0.04
TRAF4-203ENST00000394925 THAP8Q8NA92 274 aa14.79□□□□□ -0.04
TRAF4-203ENST00000394925 LINC00588Q9Y4M8 146 aa14.79□□□□□ -0.04
TRAF4-203ENST00000394925 CTDSP2O14595 271 aa14.78□□□□□ -0.04
TRAF4-203ENST00000394925 ATP5G1P05496 136 aa14.78□□□□□ -0.04
TRAF4-203ENST00000394925 TSPOP30536 169 aa14.78□□□□□ -0.04
TRAF4-203ENST00000394925 ATP5G3P48201 142 aa14.78□□□□□ -0.04
TRAF4-203ENST00000394925 GGNBP1Q5YKI7 109 aa14.78□□□□□ -0.04
TRAF4-203ENST00000394925 Q8N1X5 172 aa14.78□□□□□ -0.04
TRAF4-203ENST00000394925 TRAV12-2A0A075B6T6 113 aa14.77□□□□□ -0.05
TRAF4-203ENST00000394925 PLAC8L1A1L4L8 177 aa14.77□□□□□ -0.05
TRAF4-203ENST00000394925 CFDP00746 253 aaPredicted RBP14.77□□□□□ -0.05
TRAF4-203ENST00000394925 B2MP61769 119 aa14.77□□□□□ -0.05
TRAF4-203ENST00000394925 GPR141Q7Z602 305 aa14.77□□□□□ -0.05
TRAF4-203ENST00000394925 SPATA12Q7Z6I5 190 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms