RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 RBPJQ06330 500 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 TCF15Q12870 199 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 DEFB124Q8NES8 71 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 PGLYRP4Q96LB8 373 aa8.05□□□□□ -1.12
UBE2D3-208ENST00000394803 PRRG2O14669 202 aa8.04□□□□□ -1.12
UBE2D3-208ENST00000394803 TNFRSF13BO14836 293 aaPredicted RBP8.04□□□□□ -1.12
UBE2D3-208ENST00000394803 PLAUP00749 431 aa8.04□□□□□ -1.12
UBE2D3-208ENST00000394803 RBP4P02753 201 aa8.04□□□□□ -1.12
UBE2D3-208ENST00000394803 HTR1DP28221 377 aa8.04□□□□□ -1.12
UBE2D3-208ENST00000394803 CSN1S1P47710 185 aa8.04□□□□□ -1.12
UBE2D3-208ENST00000394803 DLX6P56179 175 aa8.04□□□□□ -1.12
UBE2D3-208ENST00000394803 ZNF841Q6ZN19 808 aa8.04□□□□□ -1.12
UBE2D3-208ENST00000394803 TMEM75Q8N9X5 138 aa8.04□□□□□ -1.12
UBE2D3-208ENST00000394803 GATD1Q8NB37 220 aa8.04□□□□□ -1.12
UBE2D3-208ENST00000394803 OR4F17Q8NGA8 305 aa8.04□□□□□ -1.12
UBE2D3-208ENST00000394803 RASL11BQ9BPW5 248 aa8.04□□□□□ -1.12
UBE2D3-208ENST00000394803 TRAV30A0A087WSZ9 112 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 A0A1B0GUT8 65 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 SERTM2A0A1B0GWG4 89 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 COL8A2P25067 703 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 LOXP28300 417 aaPredicted RBP8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 BPIFA4PQ86YQ2 179 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 WFDC8Q8IUA0 241 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 GTSF1Q8WW33 167 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 CCL17Q92583 94 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 DYNLRB1Q9NP97 96 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 SIGLEC9Q9Y336 463 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 FBLL1A6NHQ2 334 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 K7EP13 123 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 TOX4O94842 621 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 CRYGBP07316 175 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 HOXB4P17483 251 aaPredicted RBP8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 FAM120AOSQ5T036 256 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 HCP5Q6MZN7 132 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 C16orf54Q6UWD8 224 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 PPP1R27Q86WC6 154 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 MRPL36Q9P0J6 103 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 TNCP24821 2201 aa8.03□□□□□ -1.12
UBE2D3-208ENST00000394803 PCNX2A6NKB5 2137 aa8.02□□□□□ -1.12
UBE2D3-208ENST00000394803 LYZP61626 148 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 FBLN7Q53RD9 439 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 OR4C5Q8NGB2 326 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 SLC25A39Q9BZJ4 359 aaPredicted RBP8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 CLEC5AQ9NY25 188 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 INSIG2Q9Y5U4 225 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 IGHV2-70DA0A0C4DH43 119 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 SPAARA0A1B0GVQ0 90 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 VWC2LB2RUY7 222 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 SCGB2A1O75556 95 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 IGHV3-48P01763 117 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 FAM87AP0C7U9 286 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 S100A7P31151 101 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 HIST1H1AQ02539 215 aaPredicted RBP8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 BSPH1Q075Z2 132 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 PLGLAQ15195 96 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 SPATA12Q7Z6I5 190 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 CIARTQ8N365 385 aaPredicted RBP8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 RPRMLQ8N4K4 120 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 DPF1Q92782 380 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 RNASE6Q93091 150 aaKnown RBP8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 URB1-AS1Q96HZ7 61 aa8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 ZFHX2Q9C0A1 2572 aaPredicted RBP8.02□□□□□ -1.13
UBE2D3-208ENST00000394803 EP300Q09472 2414 aaPredicted RBP8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 IGLC1P0CG04 106 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 CT45A10P0DMU9 189 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 PSG1P11464 419 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 DIAPH2-AS1Q14236 149 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 MAJINQ3KP22 176 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 UNQ5815/PRO19632Q6UWF5 114 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 FA2HQ7L5A8 372 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 PRNTQ86SH4 94 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 ARL6IP6Q8N6S5 226 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 OR10AG1Q8NH19 301 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 RAB1BQ9H0U4 201 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 TPSG1Q9NRR2 321 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 AP5S1Q9NUS5 200 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 CCL25O15444 150 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 PDE6HQ13956 83 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 VAMP3Q15836 100 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 MRGPRG-AS1Q2M3A8 158 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 LYPD2Q6UXB3 125 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 GOLT1AQ6ZVE7 132 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 SHANK2-AS3Q9BTD1 123 aa8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 RALYQ9UKM9 306 aaKnown RBP8.01□□□□□ -1.13
UBE2D3-208ENST00000394803 TRBV19A0A075B6N1 114 aa8□□□□□ -1.13
UBE2D3-208ENST00000394803 IGHV1-3A0A0C4DH29 117 aa8□□□□□ -1.13
UBE2D3-208ENST00000394803 K7EM74 188 aa8□□□□□ -1.13
UBE2D3-208ENST00000394803 IGLV1-47P01700 117 aa8□□□□□ -1.13
UBE2D3-208ENST00000394803 PSMG4Q5JS54 123 aa8□□□□□ -1.13
UBE2D3-208ENST00000394803 LINC01545Q5VT33 79 aa8□□□□□ -1.13
UBE2D3-208ENST00000394803 LINC00322Q6ZN03 302 aaPredicted RBP8□□□□□ -1.13
UBE2D3-208ENST00000394803 RPEQ96AT9 228 aa8□□□□□ -1.13
UBE2D3-208ENST00000394803 SGK494Q96LW2 274 aa8□□□□□ -1.13
UBE2D3-208ENST00000394803 AAMDCQ9H7C9 122 aa8□□□□□ -1.13
UBE2D3-208ENST00000394803 SCRT2Q9NQ03 307 aa8□□□□□ -1.13
UBE2D3-208ENST00000394803 CTSZQ9UBR2 303 aa8□□□□□ -1.13
UBE2D3-208ENST00000394803 A0A0G2JNJ9 132 aa7.99□□□□□ -1.13
UBE2D3-208ENST00000394803 TEX22C9J3V5 150 aa7.99□□□□□ -1.13
UBE2D3-208ENST00000394803 H3BRN7 92 aa7.99□□□□□ -1.13
UBE2D3-208ENST00000394803 BUB1B-PAK6H3BSN5 160 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms