RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 ZNF48Q96MX3 618 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-205ENST00000394768 ACTL10Q5JWF8 245 aa6.17□□□□□ -1.42
SYNE2-205ENST00000394768 GLMPQ8WWB7 406 aa6.17□□□□□ -1.42
SYNE2-205ENST00000394768 TCF20Q9UGU0 1960 aaKnown RBP6.17□□□□□ -1.42
SYNE2-205ENST00000394768 A0A1B0GWJ7 208 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 LRRC37AA6NMS7 1700 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 C17orf98A8MV24 154 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 TNCP24821 2201 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 PIP4P2Q8N4L2 257 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 NDUFB8O95169 186 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 ZNF876PQ49A33 203 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 C2orf82Q6UX34 121 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 PLCE1Q9P212 2302 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 USF3Q68DE3 2245 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 H3BUT2 72 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 IFITM3Q01628 133 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 SH2D6Q7Z4S9 175 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 TMEM242Q9NWH2 141 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 HEPN1Q6WQI6 88 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 C14orf144Q96I85 54 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 TFF3Q07654 80 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 CARHSP1Q9Y2V2 147 aaKnown RBP6.16□□□□□ -1.42
SYNE2-205ENST00000394768 MIR17HGQ75NE6 70 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 TMEM155Q4W5P6 130 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 NHLRC3Q5JS37 347 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 TMEM158Q8WZ71 300 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 THSD7AQ9UPZ6 1657 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 FRMPD3Q5JV73 1810 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 C1orf159Q96HA4 380 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 IGLV3-32A0A0A0MS00 114 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 TMEM141Q96I45 108 aa6.16□□□□□ -1.42
SYNE2-205ENST00000394768 NYNRINQ9P2P1 1898 aaKnown RBP6.15□□□□□ -1.42
SYNE2-205ENST00000394768 COL11A2P13942 1736 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-205ENST00000394768 UNQ6494/PRO21346Q6UXR6 183 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 LINC00518Q8N0U6 118 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 IGHV1-8P0DP01 117 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 CRYBA2P53672 197 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 PCP4P48539 62 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 KLF17Q5JT82 389 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-205ENST00000394768 ATP1A1-AS1Q5TC04 95 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 FNDC10F2Z333 226 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 GZMMP51124 257 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 PMVKQ15126 192 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 RPRMLQ8N4K4 120 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 DENND4AQ7Z401 1863 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 LCNL1Q6ZST4 164 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 GFRA4Q9GZZ7 299 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 S4R3C0 116 aa6.15□□□□□ -1.42
SYNE2-205ENST00000394768 C1QTNF9P0C862 333 aa6.15□□□□□ -1.43
SYNE2-205ENST00000394768 DMRTA1Q5VZB9 504 aa6.15□□□□□ -1.43
SYNE2-205ENST00000394768 CITED1Q99966 193 aa6.15□□□□□ -1.43
SYNE2-205ENST00000394768 IGLV3-12A0A075B6K2 115 aa6.15□□□□□ -1.43
SYNE2-205ENST00000394768 A0A1W2PR77 199 aa6.15□□□□□ -1.43
SYNE2-205ENST00000394768 C5orf64Q2M2E5 130 aa6.15□□□□□ -1.43
SYNE2-205ENST00000394768 TRAV8-1A0A0A6YYK1 113 aa6.15□□□□□ -1.43
SYNE2-205ENST00000394768 RPL35AP18077 110 aaKnown RBP6.15□□□□□ -1.43
SYNE2-205ENST00000394768 C9orf106Q8NAJ2 232 aa6.15□□□□□ -1.43
SYNE2-205ENST00000394768 H3BUX3 64 aa6.15□□□□□ -1.43
SYNE2-205ENST00000394768 TRBV20-1A0A075B6N2 111 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 F5H768 121 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 H2BFSP57053 126 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 ZNF672Q499Z4 452 aaPredicted RBP6.14□□□□□ -1.43
SYNE2-205ENST00000394768 MRPL52Q86TS9 123 aaKnown RBP6.14□□□□□ -1.43
SYNE2-205ENST00000394768 RFPL3SP0C7P2 107 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 ESDP10768 282 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 EFNB3Q15768 340 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 BOD1L2Q8IYS8 172 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 RFLNBQ8N5W9 214 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 TMEM170AQ8WVE7 144 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 WDR81Q562E7 1941 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 SRRM5B3KS81 715 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 EGR2P11161 476 aaPredicted RBP6.14□□□□□ -1.43
SYNE2-205ENST00000394768 TPTE2P1Q5T6R2 138 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 WFDC6Q9BQY6 131 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 MDKP21741 143 aaPredicted RBP6.14□□□□□ -1.43
SYNE2-205ENST00000394768 LY96Q9Y6Y9 160 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 CENPVL1A0A0U1RR11 272 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 DKK4Q9UBT3 224 aa6.14□□□□□ -1.43
SYNE2-205ENST00000394768 LINC01619G3V211 115 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 EVI2AP22794 236 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 VWC2Q2TAL6 325 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 ZNF525Q8N782 197 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 RNASE7Q9H1E1 156 aaKnown RBP6.13□□□□□ -1.43
SYNE2-205ENST00000394768 IGHV1-3A0A0C4DH29 117 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 CD300EQ496F6 205 aaPredicted RBP6.13□□□□□ -1.43
SYNE2-205ENST00000394768 TCTEX1D4Q5JR98 221 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 LINC01590Q5TEZ4 76 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 IGHG3P01860 377 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 CFPP27918 469 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 PSG3Q16557 428 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 IL17DQ8TAD2 202 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 ERVH48-1M5A8F1 160 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 LIME1Q9H400 295 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 SELLP14151 372 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 ZNF114Q8NC26 417 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 PLSCR4Q9NRQ2 329 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 LSM4Q9Y4Z0 139 aaKnown RBP6.13□□□□□ -1.43
SYNE2-205ENST00000394768 C4orf48Q5BLP8 95 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 UTF1Q5T230 341 aa6.13□□□□□ -1.43
SYNE2-205ENST00000394768 RPUSD1Q9UJJ7 312 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms