RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 C12orf49Q9H741 205 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 UBTD1Q9HAC8 227 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 DOCK7Q96N67 2140 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 DSCAML1Q8TD84 2053 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 CENPVL3A0A0U1RRI6 287 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 ARMS2P0C7Q2 107 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 SRD5A1P18405 259 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 GFERP55789 205 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 ADIPOQQ15848 244 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 RPRMLQ8N4K4 120 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 SDK1Q7Z5N4 2213 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 IGKV3D-11A0A0A0MRZ8 115 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 MOSP00540 346 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 LINC00694P0DN24 101 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 LILRA6Q6PI73 481 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 ZNF329Q86UD4 541 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 DAZAP1Q96EP5 407 aaKnown RBP10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 PKIBQ9C010 78 aa10.09□□□□□ -0.79
SLC28A1-203ENST00000394573 ASXL3Q9C0F0 2248 aa10.08□□□□□ -0.8
SLC28A1-203ENST00000394573 PLCE1Q9P212 2302 aa10.08□□□□□ -0.8
SLC28A1-203ENST00000394573 A0A1W2PQF6 199 aa10.08□□□□□ -0.8
SLC28A1-203ENST00000394573 ZBTB34Q8NCN2 500 aa10.08□□□□□ -0.8
SLC28A1-203ENST00000394573 OR9G1Q8NH87 305 aa10.08□□□□□ -0.8
SLC28A1-203ENST00000394573 ATP6V0E2Q8NHE4 81 aa10.08□□□□□ -0.8
SLC28A1-203ENST00000394573 SOX21Q9Y651 276 aaPredicted RBP10.08□□□□□ -0.8
SLC28A1-203ENST00000394573 C8orf88P0DMB2 117 aa10.08□□□□□ -0.8
SLC28A1-203ENST00000394573 C3orf36Q3SXR2 165 aa10.08□□□□□ -0.8
SLC28A1-203ENST00000394573 MORN3Q6PF18 240 aaPredicted RBP10.08□□□□□ -0.8
SLC28A1-203ENST00000394573 ZNF441Q8N8Z8 693 aa10.08□□□□□ -0.8
SLC28A1-203ENST00000394573 DOCK10Q96BY6 2186 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 NPIPB11E5RHQ5 1161 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 FCN3O75636 299 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 NRGNQ92686 78 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 DLX4Q92988 240 aaPredicted RBP10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 TRAV8-2A0A0B4J237 113 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 TRAV25A0A0B4J276 109 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 IGHV5-51A0A0C4DH38 117 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 D6R8Y8 96 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 NDUFS7O75251 213 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 OR2H2O95918 312 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 RPL7P18124 248 aaKnown RBP10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 ZC2HC1BQ5TFG8 222 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 TEN1Q86WV5 123 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 ITLN1Q8WWA0 313 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 SLC25A33Q9BSK2 321 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 SLC25A2Q9BXI2 301 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 HIGD1BQ9P298 99 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 WDFY4Q6ZS81 3184 aa10.07□□□□□ -0.8
SLC28A1-203ENST00000394573 TRBV6-6A0A0A6YYG2 114 aa10.06□□□□□ -0.8
SLC28A1-203ENST00000394573 IGHV3-48P01763 117 aa10.06□□□□□ -0.8
SLC28A1-203ENST00000394573 PPP1R27Q86WC6 154 aa10.06□□□□□ -0.8
SLC28A1-203ENST00000394573 ANKRD29Q8N6D5 301 aa10.06□□□□□ -0.8
SLC28A1-203ENST00000394573 OR2H1Q9GZK4 316 aa10.06□□□□□ -0.8
SLC28A1-203ENST00000394573 TRAV8-1A0A0A6YYK1 113 aa10.06□□□□□ -0.8
SLC28A1-203ENST00000394573 SMIM9A6NGZ8 99 aa10.06□□□□□ -0.8
SLC28A1-203ENST00000394573 SMKR1H3BMG3 65 aa10.06□□□□□ -0.8
SLC28A1-203ENST00000394573 ARFGEF3Q5TH69 2177 aa10.06□□□□□ -0.8
SLC28A1-203ENST00000394573 WI2-2373I1.2A0A1W2PRP0 233 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 TMEM8BA6NDV4 472 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 C12orf77C9JDV5 145 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 KIR2DS3K7RE56 304 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 ZNF497Q6ZNH5 498 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 CIARTQ8N365 385 aaPredicted RBP10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 SMRP1Q8NCR6 262 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 FLYWCH2Q96CP2 140 aaKnown RBP10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 CHCHD5Q9BSY4 110 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 NGBQ9NPG2 151 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 HHLA3Q9XRX5 114 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 HBDP02042 147 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 COL8A1P27658 744 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 MPV17P39210 176 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 SRYQ05066 204 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 RBMXL3Q8N7X1 1067 aaKnown RBP10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 FAM167A-AS1Q96KT0 104 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 TMEM133Q9H2Q1 129 aa10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 MRPS17Q9Y2R5 130 aaKnown RBP10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 COL5A1P20908 1838 aaPredicted RBP10.05□□□□□ -0.8
SLC28A1-203ENST00000394573 LINC01549A6NIU2 74 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 NGFP01138 241 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 IL4P05112 153 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 PRSS1P07477 247 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 EIF4EBP1Q13541 118 aaPredicted RBP10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 Q6P435 159 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 TMEM160Q9NX00 188 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 FREM1Q5H8C1 2179 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 EML6Q6ZMW3 1958 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 ABCA1O95477 2261 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 CFAP47Q6ZTR5 3102 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 SUMO3P55854 103 aaPredicted RBP10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 KRTAP27-1Q3LI81 207 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 RASL10AQ92737 203 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 PAXXQ9BUH6 204 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 KLF12Q9Y4X4 402 aa10.04□□□□□ -0.8
SLC28A1-203ENST00000394573 A0A096LPE4 126 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 A0A0J9YW62 118 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 A0A1W2PPZ6 126 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 PGPA6NDG6 321 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 TBC1D28Q2M2D7 210 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 RASL11BQ9BPW5 248 aa10.03□□□□□ -0.8
SLC28A1-203ENST00000394573 RAXQ9Y2V3 346 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms