RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 IGHV3-23P01764 117 aa17.33■□□□□ 0.37
HMGA2-203ENST00000393578 CTSGP08311 255 aa17.33■□□□□ 0.37
HMGA2-203ENST00000393578 CD99P14209 185 aa17.33■□□□□ 0.37
HMGA2-203ENST00000393578 PGPEP1LA6NFU8 196 aa17.33■□□□□ 0.36
HMGA2-203ENST00000393578 ZNF329Q86UD4 541 aa17.33■□□□□ 0.36
HMGA2-203ENST00000393578 ZNF502Q8TBZ5 544 aa17.33■□□□□ 0.36
HMGA2-203ENST00000393578 Q96MF0 132 aa17.33■□□□□ 0.36
HMGA2-203ENST00000393578 H7BYZ3 331 aa17.32■□□□□ 0.36
HMGA2-203ENST00000393578 IGF1P05019 195 aa17.32■□□□□ 0.36
HMGA2-203ENST00000393578 MYCNOSP40205 109 aa17.32■□□□□ 0.36
HMGA2-203ENST00000393578 ZNF600Q6ZNG1 722 aa17.32■□□□□ 0.36
HMGA2-203ENST00000393578 OCC1Q8TAD7 63 aa17.32■□□□□ 0.36
HMGA2-203ENST00000393578 DOPEY2Q9Y3R5 2298 aa17.32■□□□□ 0.36
HMGA2-203ENST00000393578 H3BRN7 92 aa17.31■□□□□ 0.36
HMGA2-203ENST00000393578 RANP62826 216 aaKnown RBP17.31■□□□□ 0.36
HMGA2-203ENST00000393578 C9orf152Q5JTZ5 239 aa17.31■□□□□ 0.36
HMGA2-203ENST00000393578 KRTAP1-3Q8IUG1 177 aa17.31■□□□□ 0.36
HMGA2-203ENST00000393578 BLNKQ8WV28 456 aa17.31■□□□□ 0.36
HMGA2-203ENST00000393578 AURKAIP1Q9NWT8 199 aaPredicted RBP17.31■□□□□ 0.36
HMGA2-203ENST00000393578 IGHG2P01859 326 aa17.31■□□□□ 0.36
HMGA2-203ENST00000393578 FLI1Q01543 452 aaPredicted RBP17.31■□□□□ 0.36
HMGA2-203ENST00000393578 GAR1Q9NY12 217 aaKnown RBP17.31■□□□□ 0.36
HMGA2-203ENST00000393578 CR1P17927 2039 aa17.3■□□□□ 0.36
HMGA2-203ENST00000393578 USF2Q15853 346 aaPredicted RBP17.3■□□□□ 0.36
HMGA2-203ENST00000393578 SNRPCP09234 159 aaKnown RBP17.29■□□□□ 0.36
HMGA2-203ENST00000393578 CXCL1P09341 107 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 HIST1H1EP10412 219 aaKnown RBP17.29■□□□□ 0.36
HMGA2-203ENST00000393578 GNG4P50150 75 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 DEFB112Q30KQ8 113 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 BPIFA4PQ86YQ2 179 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 CHRDL1Q9BU40 450 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 ZFHX3Q15911 3703 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 TGIF2-C20orf24A0A0A6YYL0 155 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 MDFIC2A0A1B0GVS7 189 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 C1orf196B1AJZ1 125 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 PPP1R2P9O14990 202 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 FSHBP01225 129 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 ADMP35318 185 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 CENPWQ5EE01 88 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 BCL6BQ8N143 479 aaPredicted RBP17.29■□□□□ 0.36
HMGA2-203ENST00000393578 SFRP2Q96HF1 295 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 OR5B12Q96R08 314 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 RNF24Q9Y225 148 aa17.29■□□□□ 0.36
HMGA2-203ENST00000393578 TRBV7-1A0A0A6YYK4 115 aa17.28■□□□□ 0.36
HMGA2-203ENST00000393578 HIST2H2BCQ6DN03 193 aa17.28■□□□□ 0.36
HMGA2-203ENST00000393578 EEF1AKMT3Q96AZ1 226 aa17.28■□□□□ 0.36
HMGA2-203ENST00000393578 MS4A10Q96PG2 267 aa17.28■□□□□ 0.36
HMGA2-203ENST00000393578 TRBV24-1A0A075B6N3 115 aa17.28■□□□□ 0.36
HMGA2-203ENST00000393578 PEX7O00628 323 aa17.28■□□□□ 0.36
HMGA2-203ENST00000393578 PFN1P07737 140 aaKnown RBP17.28■□□□□ 0.36
HMGA2-203ENST00000393578 GPR183P32249 361 aa17.28■□□□□ 0.36
HMGA2-203ENST00000393578 RAB5BP61020 215 aa17.28■□□□□ 0.36
HMGA2-203ENST00000393578 CSPG4Q6UVK1 2322 aa17.27■□□□□ 0.36
HMGA2-203ENST00000393578 ZNF98A6NK75 572 aa17.27■□□□□ 0.36
HMGA2-203ENST00000393578 FAM223BA6NKX1 122 aa17.27■□□□□ 0.36
HMGA2-203ENST00000393578 K7EN84 100 aa17.27■□□□□ 0.36
HMGA2-203ENST00000393578 CLEC3BP05452 202 aa17.27■□□□□ 0.36
HMGA2-203ENST00000393578 S100PP25815 95 aa17.27■□□□□ 0.36
HMGA2-203ENST00000393578 GALR1P47211 349 aa17.27■□□□□ 0.36
HMGA2-203ENST00000393578 TAS2R60P59551 318 aa17.27■□□□□ 0.36
HMGA2-203ENST00000393578 FAM223AQ8IWN6 122 aa17.27■□□□□ 0.36
HMGA2-203ENST00000393578 ZNF586Q9NXT0 402 aa17.27■□□□□ 0.36
HMGA2-203ENST00000393578 LINC00527Q9UJ94 153 aa17.27■□□□□ 0.36
HMGA2-203ENST00000393578 CDC42EP3Q9UKI2 254 aa17.27■□□□□ 0.36
HMGA2-203ENST00000393578 EPDR1Q9UM22 224 aa17.27■□□□□ 0.36
HMGA2-203ENST00000393578 PGPA6NDG6 321 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 HNF1AP20823 631 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 BLCAPP62952 87 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 C9orf139Q6ZV77 190 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 C1QL4Q86Z23 238 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 CCDC140Q96MF4 163 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 ATP6V0BQ99437 205 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 ZANQ9Y493 2812 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 BRI3O95415 125 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 RPS10P46783 165 aaKnown RBP17.26■□□□□ 0.35
HMGA2-203ENST00000393578 CNN1P51911 297 aaKnown RBP17.26■□□□□ 0.35
HMGA2-203ENST00000393578 ATP5G2Q06055 141 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 CYB5R2Q6BCY4 276 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 TEX38Q6PEX7 206 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 OR4F17Q8NGA8 305 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 FAM210BQ96KR6 192 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 IGF2BP2-AS1Q96M15 143 aa17.26■□□□□ 0.35
HMGA2-203ENST00000393578 IGHV4-59P01825 116 aa17.25■□□□□ 0.35
HMGA2-203ENST00000393578 SLC25A5P05141 298 aaKnown RBP17.25■□□□□ 0.35
HMGA2-203ENST00000393578 SRP14P37108 136 aaKnown RBP17.25■□□□□ 0.35
HMGA2-203ENST00000393578 IER3P46695 156 aa17.25■□□□□ 0.35
HMGA2-203ENST00000393578 C5orf17Q8NAS9 161 aa17.25■□□□□ 0.35
HMGA2-203ENST00000393578 TMEM190Q8WZ59 177 aa17.25■□□□□ 0.35
HMGA2-203ENST00000393578 Q9H3A6 140 aa17.25■□□□□ 0.35
HMGA2-203ENST00000393578 NBPF19A0A087WUL8 3843 aa17.25■□□□□ 0.35
HMGA2-203ENST00000393578 PRRC2AP48634 2157 aaKnown RBP17.25■□□□□ 0.35
HMGA2-203ENST00000393578 IGLC2P0DOY2 106 aa17.24■□□□□ 0.35
HMGA2-203ENST00000393578 H3BTX0 84 aa17.24■□□□□ 0.35
HMGA2-203ENST00000393578 H3BUA1 57 aa17.24■□□□□ 0.35
HMGA2-203ENST00000393578 AP4M1O00189 453 aa17.24■□□□□ 0.35
HMGA2-203ENST00000393578 BMPR1BO00238 502 aa17.24■□□□□ 0.35
HMGA2-203ENST00000393578 MRPS12O15235 138 aaKnown RBP17.24■□□□□ 0.35
HMGA2-203ENST00000393578 PPIFP30405 207 aaKnown RBP17.24■□□□□ 0.35
HMGA2-203ENST00000393578 S100A7P31151 101 aa17.24■□□□□ 0.35
HMGA2-203ENST00000393578 CLEC19AQ6UXS0 136 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms